MGE detailed information
MGE type: Mobilizable plasmid MGE length: 98457 bp
Accession: NZ_CP055025 Location: 1..98457 Organism: Shigella flexneri strain SWHEFF_67 Replicon: plasmid unnamed1
Accession: NZ_CP055025 Location: 1..98457 Organism: Shigella flexneri strain SWHEFF_67 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ75_RS22155 (HUZ75_21990) | 135..1886 | - | 1752 | Protein_1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HUZ75_RS22160 (HUZ75_21995) | 1890..2282 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| HUZ75_RS22165 (HUZ75_22000) | 2420..3304 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| HUZ75_RS22170 (HUZ75_22005) | 3336..4535 | - | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| HUZ75_RS22175 (HUZ75_22010) | 4641..5291 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HUZ75_RS22180 (HUZ75_22015) | 5323..5565 | - | 243 | WP_000844627.1 | transposase | - |
| HUZ75_RS22185 (HUZ75_22020) | 5728..6273 | + | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| HUZ75_RS22190 (HUZ75_22025) | 6410..6982 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| HUZ75_RS22195 (HUZ75_22030) | 7019..8410 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| HUZ75_RS22200 (HUZ75_22035) | 8443..8871 | + | 429 | Protein_10 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| HUZ75_RS22205 (HUZ75_22040) | 9190..9846 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| HUZ75_RS22210 (HUZ75_22045) | 10241..10857 | + | 617 | Protein_12 | transposase | - |
| HUZ75_RS22215 (HUZ75_22050) | 10924..11628 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ75_RS22220 (HUZ75_22055) | 11574..12686 | - | 1113 | WP_024166810.1 | IS91 family transposase ISAzo26 | Transposase |
| HUZ75_RS22225 (HUZ75_22060) | 12842..13315 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| HUZ75_RS22230 (HUZ75_22065) | 13562..14266 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ75_RS22235 (HUZ75_22070) | 14318..15118 | + | 801 | Protein_17 | Tn3 family transposase TnpA_IS3000 | Transposase |
| HUZ75_RS22240 (HUZ75_22075) | 15220..15681 | + | 462 | WP_196451626.1 | DMT family transporter | - |
| HUZ75_RS22245 (HUZ75_22080) | 15683..15856 | + | 174 | Protein_19 | IS6 family transposase | - |
| HUZ75_RS22250 (HUZ75_22085) | 15996..16061 | - | 66 | Protein_20 | EAL domain-containing protein | - |
| HUZ75_RS22255 (HUZ75_22090) | 16128..16832 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ75_RS22260 (HUZ75_22095) | 16898..17701 | + | 804 | Protein_22 | Methyl-accepting chemotaxis protein McpQ | VF |
| HUZ75_RS22265 (HUZ75_22100) | 18296..18517 | + | 222 | WP_000542336.1 | hypothetical protein | - |
| HUZ75_RS22270 (HUZ75_22105) | 18525..19556 | + | 1032 | WP_029393497.1 | site-specific integrase | - |
| HUZ75_RS22275 (HUZ75_22110) | 19708..19917 | + | 210 | WP_077249223.1 | lysogeny establishment protein | - |
| HUZ75_RS22280 (HUZ75_22115) | 20165..20725 | + | 561 | WP_039021622.1 | Ref family protein | - |
| HUZ75_RS22285 (HUZ75_22120) | 20914..21558 | + | 645 | WP_001514450.1 | hypothetical protein | - |
| HUZ75_RS22290 (HUZ75_22125) | 21612..22301 | - | 690 | WP_039021624.1 | EAL domain-containing protein | - |
| HUZ75_RS22295 (HUZ75_22130) | 22536..23257 | + | 722 | Protein_29 | helix-turn-helix domain-containing protein | - |
| HUZ75_RS22300 (HUZ75_22135) | 23296..23544 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| HUZ75_RS22305 (HUZ75_22140) | 23541..23981 | - | 441 | WP_023352064.1 | hypothetical protein | - |
| HUZ75_RS22310 (HUZ75_22145) | 24015..27905 | - | 3891 | WP_223667647.1 | helicase-related protein | - |
| HUZ75_RS22315 (HUZ75_22150) | 28565..28816 | + | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HUZ75_RS22320 (HUZ75_22155) | 28813..29100 | + | 288 | WP_032206513.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HUZ75_RS22325 | 29468..29581 | - | 114 | Protein_35 | alkaline phosphatase | - |
| HUZ75_RS22330 (HUZ75_22165) | 29580..29785 | + | 206 | Protein_36 | hypothetical protein | - |
| HUZ75_RS22335 (HUZ75_22170) | 29960..33493 | - | 3534 | WP_065311112.1 | Outer membrane protein IcsA autotransporter | VF |
| HUZ75_RS22340 (HUZ75_22175) | 34078..34323 | - | 246 | Protein_38 | IS91 family transposase | - |
| HUZ75_RS22345 | 34385..35937 | - | 1553 | Protein_39 | IS3 family transposase ISKpn38 | Transposase |
| HUZ75_RS22350 (HUZ75_22200) | 36003..36900 | - | 898 | Protein_40 | IS3 family transposase ISEc31 | Transposase |
| HUZ75_RS22355 (HUZ75_22205) | 36910..37284 | - | 375 | Protein_41 | IS30 family transposase IS30D | Transposase |
| HUZ75_RS22360 (HUZ75_22210) | 37351..38513 | + | 1163 | WP_085947598.1 | IS3 family transposase ISEc17 | Transposase |
| HUZ75_RS22365 (HUZ75_22215) | 38543..38695 | - | 153 | Protein_43 | IS30 family transposase | - |
| HUZ75_RS22370 (HUZ75_22220) | 38753..39450 | + | 698 | WP_239617285.1 | IS1-like element IS1B family transposase | - |
| HUZ75_RS22375 (HUZ75_22225) | 40093..40431 | - | 339 | WP_223656872.1 | hypothetical protein | - |
| HUZ75_RS22380 (HUZ75_22230) | 40434..40964 | - | 531 | WP_039022033.1 | hypothetical protein | - |
| HUZ75_RS22385 (HUZ75_22235) | 41990..42475 | + | 486 | WP_000071636.1 | conjugative transfer protein MobI(A/C) | - |
| HUZ75_RS22390 (HUZ75_22240) | 42472..43194 | + | 723 | WP_050010024.1 | hypothetical protein | - |
| HUZ75_RS22400 (HUZ75_22250) | 44228..44539 | + | 312 | Protein_50 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HUZ75_RS22410 (HUZ75_22260) | 45492..46124 | + | 633 | WP_000433505.1 | LysE family transporter | - |
| HUZ75_RS22415 (HUZ75_22265) | 46246..47649 | + | 1404 | WP_050010088.1 | GGDEF domain-containing protein | - |
| HUZ75_RS22420 (HUZ75_22270) | 47744..48415 | + | 672 | WP_046788564.1 | FadR/GntR family transcriptional regulator | - |
| HUZ75_RS22425 (HUZ75_22275) | 48474..49499 | - | 1026 | WP_000864945.1 | zinc-binding alcohol dehydrogenase family protein | - |
| HUZ75_RS22430 (HUZ75_22280) | 49471..50760 | - | 1290 | WP_000824245.1 | MFS transporter | - |
| HUZ75_RS22435 (HUZ75_22285) | 51060..51893 | - | 834 | Protein_57 | putative cyclic di-GMP phosphodiesterase PdeG | VF |
| HUZ75_RS22440 (HUZ75_22290) | 51948..52645 | + | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| HUZ75_RS22445 (HUZ75_22295) | 52918..53259 | + | 342 | WP_032666102.1 | YecR family lipoprotein | - |
| HUZ75_RS22450 (HUZ75_22300) | 53324..53488 | + | 165 | Protein_60 | XRE family transcriptional regulator | - |
| HUZ75_RS22455 (HUZ75_22305) | 53658..54536 | + | 879 | WP_225567671.1 | hypothetical protein | - |
| HUZ75_RS22465 (HUZ75_22315) | 55789..56500 | - | 712 | Protein_63 | IS3 family transposase | - |
| HUZ75_RS22470 (HUZ75_22320) | 56560..57773 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| HUZ75_RS22475 | 57931..58062 | + | 132 | Protein_65 | IS3 family transposase ISEhe3 | Transposase |
| HUZ75_RS22480 (HUZ75_22325) | 58072..58320 | - | 249 | Protein_66 | IS3 family transposase ISEhe3 | Transposase |
| HUZ75_RS22485 (HUZ75_22330) | 58718..58873 | + | 156 | WP_001352007.1 | type I toxin-antitoxin system toxin HokD | - |
| HUZ75_RS22490 (HUZ75_22335) | 59067..60179 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| HUZ75_RS22495 (HUZ75_22340) | 60339..60848 | - | 510 | WP_000509940.1 | hypothetical protein | - |
| HUZ75_RS22500 (HUZ75_22345) | 60860..61441 | - | 582 | WP_000035250.1 | hypothetical protein | - |
| HUZ75_RS22505 (HUZ75_22350) | 61477..62292 | - | 816 | WP_000041769.1 | hypothetical protein | - |
| HUZ75_RS22510 (HUZ75_22355) | 62302..63891 | - | 1590 | WP_032213770.1 | hypothetical protein | - |
| HUZ75_RS22515 (HUZ75_22360) | 63951..65657 | - | 1707 | WP_000067710.1 | hypothetical protein | - |
| HUZ75_RS22520 (HUZ75_22365) | 65883..66884 | - | 1002 | WP_000038866.1 | ParB family protein | - |
| HUZ75_RS22525 (HUZ75_22370) | 66901..68097 | - | 1197 | WP_001285362.1 | AAA family ATPase | - |
| HUZ75_RS22530 (HUZ75_22375) | 68266..69075 | - | 810 | WP_039021694.1 | GIY-YIG nuclease family protein | - |
| HUZ75_RS22535 (HUZ75_22380) | 69366..70250 | - | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| HUZ75_RS22540 (HUZ75_22385) | 70586..70978 | - | 393 | WP_001281115.1 | hypothetical protein | - |
| HUZ75_RS23225 | 70988..71119 | - | 132 | WP_001113883.1 | hypothetical protein | - |
| HUZ75_RS23230 | 71154..71285 | - | 132 | WP_257810973.1 | hypothetical protein | - |
| HUZ75_RS22545 (HUZ75_22395) | 71401..72369 | - | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| HUZ75_RS22550 (HUZ75_22400) | 72404..75295 | + | 2892 | Protein_82 | cellulose synthase complex outer membrane protein BcsC | - |
| HUZ75_RS22560 (HUZ75_22410) | 76597..77825 | - | 1229 | Protein_84 | IS3 family transposase | - |
| HUZ75_RS22565 (HUZ75_22415) | 78014..78748 | + | 735 | WP_000578338.1 | helix-turn-helix domain-containing protein | - |
| HUZ75_RS22570 (HUZ75_22420) | 78857..79554 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| HUZ75_RS22575 (HUZ75_22425) | 79489..80223 | - | 735 | WP_065311133.1 | hypothetical protein | Relaxase |
| HUZ75_RS22580 (HUZ75_22430) | 80234..80956 | - | 723 | WP_050010024.1 | hypothetical protein | - |
| HUZ75_RS22585 (HUZ75_22435) | 80953..81438 | - | 486 | WP_000071636.1 | conjugative transfer protein MobI(A/C) | - |
| HUZ75_RS22590 (HUZ75_22440) | 82464..82994 | + | 531 | WP_039022033.1 | hypothetical protein | - |
| HUZ75_RS22595 (HUZ75_22445) | 82997..83338 | + | 342 | WP_232210828.1 | hypothetical protein | - |
| HUZ75_RS22605 (HUZ75_22455) | 84025..84720 | + | 696 | Protein_93 | IS30-like element IS30 family transposase | - |
| HUZ75_RS22610 (HUZ75_22460) | 84733..84990 | - | 258 | Protein_94 | IS3 family transposase ISEc52 | Transposase |
| HUZ75_RS22620 (HUZ75_22470) | 85175..85519 | + | 345 | WP_223674116.1 | hypothetical protein | - |
| HUZ75_RS22625 (HUZ75_22475) | 85516..86193 | + | 678 | WP_065311122.1 | metallophosphoesterase | - |
| HUZ75_RS22630 (HUZ75_22480) | 86190..86891 | + | 702 | WP_039022011.1 | hypothetical protein | - |
| HUZ75_RS22635 (HUZ75_22485) | 87193..88455 | + | 1263 | WP_000107689.1 | hypothetical protein | - |
| HUZ75_RS22640 (HUZ75_22490) | 88528..89034 | + | 507 | WP_001379122.1 | hypothetical protein | - |
| HUZ75_RS23235 | 89085..89219 | + | 135 | WP_001312275.1 | hypothetical protein | - |
| HUZ75_RS22645 (HUZ75_22495) | 89229..89810 | + | 582 | WP_039022010.1 | hypothetical protein | - |
| HUZ75_RS22650 (HUZ75_22500) | 89803..89982 | + | 180 | Protein_102 | hypothetical protein | - |
| HUZ75_RS22655 (HUZ75_22505) | 90332..90625 | + | 294 | WP_039022009.1 | hypothetical protein | - |
| HUZ75_RS22660 (HUZ75_22510) | 90625..90789 | + | 165 | WP_152950163.1 | hypothetical protein | - |
| HUZ75_RS22665 (HUZ75_22515) | 90856..91230 | + | 375 | WP_039022008.1 | hypothetical protein | - |
| HUZ75_RS22670 (HUZ75_22520) | 91212..91961 | + | 750 | WP_171841598.1 | hypothetical protein | - |
| HUZ75_RS22675 (HUZ75_22525) | 92031..92297 | + | 267 | WP_223671585.1 | hypothetical protein | - |
| HUZ75_RS22680 (HUZ75_22530) | 93087..93338 | + | 252 | WP_039022007.1 | DNA polymerase III subunit theta | - |
| HUZ75_RS22685 (HUZ75_22535) | 93345..93920 | - | 576 | WP_039022006.1 | hypothetical protein | - |
| HUZ75_RS22690 (HUZ75_22540) | 94095..94484 | + | 390 | WP_000506730.1 | S24 family peptidase | - |
| HUZ75_RS22695 (HUZ75_22545) | 94557..94778 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HUZ75_RS22700 (HUZ75_22550) | 94778..95158 | + | 381 | WP_001216044.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| HUZ75_RS22705 (HUZ75_22555) | 95163..95342 | + | 180 | WP_039022005.1 | hypothetical protein | - |
| HUZ75_RS22710 (HUZ75_22560) | 95370..96239 | + | 870 | Protein_114 | DUF968 domain-containing protein | - |
| HUZ75_RS22715 | 96247..96381 | + | 135 | WP_215243272.1 | phage antirepressor KilAC domain-containing protein | - |
| HUZ75_RS22720 (HUZ75_22565) | 96414..97265 | - | 852 | WP_000611653.1 | phage repressor protein C1 | - |
| HUZ75_RS22725 (HUZ75_22570) | 97376..97585 | - | 210 | WP_000874154.1 | hypothetical protein | - |
| HUZ75_RS22150 (HUZ75_21985) | 97776..98457 | + | 682 | WP_223678491.1 | IS1-like element IS1B family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|