MGE detailed information
MGE type: Prophage MGE length: 84817 bp
Accession: NZ_CP054992 Location: 2277666..2362482 Organism: Shigella flexneri strain STIN_87 Replicon: chromosome
Accession: NZ_CP054992 Location: 2277666..2362482 Organism: Shigella flexneri strain STIN_87 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ57_RS11115 (2273757) | 2273757..2274122 | + | 366 | WP_000276149.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| HUZ57_RS11120 (2274109) | 2274109..2274438 | + | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| HUZ57_RS11125 (2274477) | 2274477..2275298 | - | 822 | WP_001260865.1 | serine protease | - |
| HUZ57_RS11130 (2275398) | 2275398..2275481 | - | 84 | WP_000233090.1 | hypothetical protein | - |
| HUZ57_RS11135 (2275574) | 2275574..2275882 | - | 309 | WP_001340364.1 | acid resistance repetitive basic protein Asr | - |
| HUZ57_RS11140 (2276306) | 2276306..2277559 | - | 1254 | WP_000091840.1 | MFS transporter | - |
| HUZ57_RS11145 (2277666) | 2277666..2278559 | + | 894 | WP_001019525.1 | hypothetical protein | VF |
| HUZ57_RS11150 (2278694) | 2278694..2279914 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| HUZ57_RS11155 (2280039) | 2280039..2280734 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| HUZ57_RS11160 (2280687) | 2280687..2281979 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| HUZ57_RS11165 (2282138) | 2282138..2282752 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| HUZ57_RS11170 (2282795) | 2282795..2283649 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| HUZ57_RS11175 (2283651) | 2283651..2284268 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| HUZ57_RS11180 (2284279) | 2284279..2286702 | - | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| HUZ57_RS11185 (2286763) | 2286763..2289189 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| HUZ57_RS11190 (2289388) | 2289388..2289693 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| HUZ57_RS11195 (2289801) | 2289801..2290511 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| HUZ57_RS11200 (2290514) | 2290514..2291074 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| HUZ57_RS11205 (2291109) | 2291109..2291450 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| HUZ57_RS11210 (2291585) | 2291585..2291911 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| HUZ57_RS11215 (2292117) | 2292117..2293311 | + | 1195 | Protein_2201 | starvation-sensing protein RspA | - |
| HUZ57_RS11220 (2293323) | 2293323..2294342 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| HUZ57_RS11225 (2294530) | 2294530..2295810 | - | 1281 | WP_000876958.1 | hypothetical protein ; Integrase | Integrase |
| HUZ57_RS11230 (2295845) | 2295845..2296096 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| HUZ57_RS11235 (2296169) | 2296169..2298640 | - | 2472 | Protein_2205 | 3'-5' exoribonuclease | - |
| HUZ57_RS11240 (2298733) | 2298733..2298924 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| HUZ57_RS11245 (2298921) | 2298921..2299109 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| HUZ57_RS11250 (2299677) | 2299677..2299895 | - | 219 | WP_001171942.1 | protein YdfC | - |
| HUZ57_RS24900 (2299925) | 2299925..2300053 | - | 129 | WP_000344964.1 | protein YdfB | - |
| HUZ57_RS11255 (2300055) | 2300055..2300210 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| HUZ57_RS11260 (2300377) | 2300377..2300784 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| HUZ57_RS11265 (2300868) | 2300868..2301098 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| HUZ57_RS11270 (2301082) | 2301082..2301603 | + | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| HUZ57_RS11275 (2301584) | 2301584..2302549 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| HUZ57_RS11280 (2302590) | 2302590..2303012 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| HUZ57_RS11285 (2303009) | 2303009..2303498 | + | 490 | Protein_2216 | class I SAM-dependent methyltransferase | - |
| HUZ57_RS11290 (2303881) | 2303881..2305420 | - | 1540 | Protein_2217 | IS66 family transposase ISEc22 | Transposase |
| HUZ57_RS11295 (2305469) | 2305469..2305816 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| HUZ57_RS11300 (2305813) | 2305813..2306217 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| HUZ57_RS11305 (2306439) | 2306439..2306860 | + | 422 | Protein_2220 | hypothetical protein | - |
| HUZ57_RS11310 (2307495) | 2307495..2308808 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| HUZ57_RS11315 (2309245) | 2309245..2309577 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| HUZ57_RS11320 (2309780) | 2309780..2310085 | - | 306 | WP_001326990.1 | protein YdfV | - |
| HUZ57_RS11325 (2310110) | 2310110..2310349 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| HUZ57_RS11330 (2310349) | 2310349..2310636 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| HUZ57_RS11335 (2310708) | 2310708..2310863 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| HUZ57_RS11340 (2311080) | 2311080..2311331 | + | 252 | WP_000980994.1 | protein Rem | - |
| HUZ57_RS11345 (2311398) | 2311398..2311676 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| HUZ57_RS11350 (2311678) | 2311678..2312727 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| HUZ57_RS11355 (2312741) | 2312741..2313211 | + | 471 | Protein_2230 | antitermination protein | - |
| HUZ57_RS11360 (2313266) | 2313266..2313963 | + | 698 | WP_106423973.1 | IS1 family transposase | - |
| HUZ57_RS11365 (2313977) | 2313977..2314081 | - | 105 | Protein_2232 | putative zinc-binding protein YnfU | - |
| HUZ57_RS11370 (2314301) | 2314301..2314516 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| HUZ57_RS11375 (2314521) | 2314521..2314832 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| HUZ57_RS11380 (2314829) | 2314829..2315362 | + | 534 | WP_001092971.1 | lysozyme | - |
| HUZ57_RS11385 (2315359) | 2315359..2315856 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| HUZ57_RS11390 (2316219) | 2316219..2316431 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| HUZ57_RS11395 (2316442) | 2316442..2316630 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| HUZ57_RS11400 (2316633) | 2316633..2316698 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| HUZ57_RS11405 (2316703) | 2316703..2316933 | + | 231 | WP_000720962.1 | protein YnfN | - |
| HUZ57_RS11410 (2317105) | 2317105..2317278 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| HUZ57_RS11415 (2317430) | 2317430..2317840 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| HUZ57_RS11420 (2317898) | 2317898..2318131 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| HUZ57_RS11425 (2318520) | 2318520..2319065 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| HUZ57_RS11430 (2319040) | 2319040..2320965 | + | 1926 | WP_001027259.1 | phage terminase large subunit family protein | - |
| HUZ57_RS11435 (2320962) | 2320962..2321168 | + | 207 | WP_000198149.1 | gpW family protein | - |
| HUZ57_RS11440 (2321165) | 2321165..2322766 | + | 1602 | WP_001349919.1 | phage portal protein | - |
| HUZ57_RS11445 (2322747) | 2322747..2324066 | + | 1320 | WP_072775492.1 | S49 family peptidase | - |
| HUZ57_RS11450 (2324076) | 2324076..2324408 | + | 333 | WP_001295978.1 | head decoration protein | - |
| HUZ57_RS11455 (2324465) | 2324465..2325490 | + | 1026 | WP_000063277.1 | major capsid protein | - |
| HUZ57_RS11460 (2325532) | 2325532..2325930 | + | 399 | WP_000158905.1 | DNA-packaging protein FI | - |
| HUZ57_RS11465 (2325942) | 2325942..2326295 | + | 354 | WP_000753007.1 | head-tail joining protein | - |
| HUZ57_RS11470 (2326307) | 2326307..2326885 | + | 579 | WP_000975070.1 | phage tail protein | - |
| HUZ57_RS11475 (2326882) | 2326882..2327277 | + | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| HUZ57_RS11480 (2327285) | 2327285..2328025 | + | 741 | WP_001349920.1 | phage tail protein | - |
| HUZ57_RS11485 (2328041) | 2328041..2328463 | + | 423 | WP_000479142.1 | phage minor tail protein G | - |
| HUZ57_RS11490 (2328445) | 2328445..2328879 | + | 435 | WP_000459465.1 | phage tail assembly protein T | - |
| HUZ57_RS11495 (2328872) | 2328872..2331433 | + | 2562 | WP_000840342.1 | phage tail tape measure protein | - |
| HUZ57_RS11500 (2331430) | 2331430..2331759 | + | 330 | WP_000847379.1 | phage tail protein | - |
| HUZ57_RS11505 (2331759) | 2331759..2332457 | + | 699 | WP_001152640.1 | phage minor tail protein L | - |
| HUZ57_RS11510 (2332463) | 2332463..2333206 | + | 744 | WP_000194783.1 | C40 family peptidase | - |
| HUZ57_RS11515 (2333203) | 2333203..2333775 | + | 573 | WP_239612377.1 | tail assembly protein | - |
| HUZ57_RS11520 (2333836) | 2333836..2337333 | + | 3498 | WP_000515714.1 | host specificity protein J | - |
| HUZ57_RS11525 (2337403) | 2337403..2338002 | + | 600 | WP_001230375.1 | hypothetical protein | VF |
| HUZ57_RS11530 (2338067) | 2338067..2340241 | + | 2175 | Protein_2265 | prophage tail fiber N-terminal domain-containing protein | - |
| HUZ57_RS11540 (2341554) | 2341554..2342402 | + | 849 | WP_207186136.1 | phage tail protein | - |
| HUZ57_RS11545 (2342402) | 2342402..2342977 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| HUZ57_RS11550 (2343075) | 2343075..2343665 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HUZ57_RS11555 (2343982) | 2343982..2344215 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| HUZ57_RS11560 (2344284) | 2344284..2344397 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| HUZ57_RS11565 (2344918) | 2344918..2346285 | + | 1368 | Protein_2272 | MHS family MFS transporter | - |
| HUZ57_RS11570 (2346374) | 2346374..2347834 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| HUZ57_RS11575 (2347869) | 2347869..2348072 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| HUZ57_RS11580 (2348249) | 2348249..2348935 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| HUZ57_RS11585 (2349024) | 2349024..2349770 | - | 747 | WP_000636571.1 | hypothetical protein | VF |
| HUZ57_RS11590 (2349907) | 2349907..2351952 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| HUZ57_RS11595 (2351996) | 2351996..2352514 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| HUZ57_RS11600 (2352790) | 2352790..2353182 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| HUZ57_RS11605 (2353437) | 2353437..2354327 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| HUZ57_RS11610 (2354442) | 2354442..2354546 | - | 105 | WP_211180496.1 | protein MgtT | - |
| HUZ57_RS11615 (2354546) | 2354546..2354641 | - | 96 | WP_000901367.1 | protein MgtS | - |
| HUZ57_RS11620 (2354768) | 2354768..2355955 | - | 1188 | WP_001054183.1 | efflux MFS transporter YdeE | - |
| HUZ57_RS11625 (2356150) | 2356150..2357048 | + | 899 | Protein_2284 | O-acetylserine/cysteine exporter | - |
| HUZ57_RS11630 (2357079) | 2357079..2357297 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| HUZ57_RS11635 (2357329) | 2357329..2357712 | - | 384 | WP_000091199.1 | hypothetical protein | VF |
| HUZ57_RS11640 (2357732) | 2357732..2358166 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| HUZ57_RS11645 (2358378) | 2358378..2359043 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| HUZ57_RS11650 (2359068) | 2359068..2360258 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| HUZ57_RS11655 (2360408) | 2360408..2361523 | - | 1116 | WP_000258591.1 | putative protein YneK | - |
| HUZ57_RS11660 (2361601) | 2361601..2362482 | - | 882 | WP_000366501.1 | hypothetical protein | VF |
| HUZ57_RS11665 (2362583) | 2362583..2363971 | + | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
| HUZ57_RS11670 (2364035) | 2364035..2364961 | + | 927 | WP_000257409.1 | glutaminase B | - |
| HUZ57_RS11675 (2364961) | 2364961..2365320 | + | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| HUZ57_RS11680 (2365393) | 2365393..2366379 | + | 987 | Protein_2295 | GGDEF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|