MGE detailed information
MGE type: Prophage MGE length: 61269 bp
Accession: NZ_CP054992 Location: 1792325..1853593 Organism: Shigella flexneri strain STIN_87 Replicon: chromosome
Accession: NZ_CP054992 Location: 1792325..1853593 Organism: Shigella flexneri strain STIN_87 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ57_RS08465 (1787506) | 1787506..1787568 | + | 63 | WP_010723108.1 | membrane protein YoeI | - |
| HUZ57_RS08470 (1787558) | 1787558..1788916 | + | 1359 | WP_000019197.1 | putrescine/proton symporter PlaP | - |
| HUZ57_RS08475 (1789095) | 1789095..1790153 | + | 1059 | WP_000492321.1 | thiosulfate utilization transporter TsuA/YeeE | - |
| HUZ57_RS08480 (1790167) | 1790167..1790394 | + | 228 | WP_000985273.1 | thiosulfate utilization sulfurtransferase TsuB/YeeD | - |
| HUZ57_RS08485 (1790437) | 1790437..1791861 | - | 1425 | WP_032329337.1 | exodeoxyribonuclease I | - |
| HUZ57_RS08490 (1792043) | 1792043..1793221 | + | 1179 | WP_113411266.1 | hypothetical protein ; Integrase | Integrase |
| HUZ57_RS08495 (1793202) | 1793202..1793393 | - | 192 | WP_000132739.1 | AlpA family phage regulatory protein | - |
| HUZ57_RS08500 (1793473) | 1793473..1793817 | - | 345 | WP_001281194.1 | hypothetical protein | - |
| HUZ57_RS08505 (1793918) | 1793918..1794097 | - | 180 | WP_001277767.1 | Eag protein | - |
| HUZ57_RS08510 (1794194) | 1794194..1794883 | - | 690 | WP_113411265.1 | ead/Ea22-like family protein | - |
| HUZ57_RS08515 (1794880) | 1794880..1795254 | - | 375 | WP_113411264.1 | hypothetical protein | - |
| HUZ57_RS08520 (1795251) | 1795251..1795415 | - | 165 | WP_097423133.1 | DUF2737 family protein | - |
| HUZ57_RS08525 (1795432) | 1795432..1795746 | - | 315 | WP_113411263.1 | hypothetical protein | - |
| HUZ57_RS08530 (1795758) | 1795758..1796240 | - | 483 | WP_113411262.1 | siphovirus Gp157 family protein | - |
| HUZ57_RS08535 (1796224) | 1796224..1797135 | - | 912 | WP_000065840.1 | recombinase RecT | - |
| HUZ57_RS08540 (1797132) | 1797132..1797440 | - | 309 | WP_000604104.1 | hypothetical protein | - |
| HUZ57_RS08545 (1797525) | 1797525..1797677 | - | 153 | WP_001243355.1 | host cell division inhibitory peptide Kil | - |
| HUZ57_RS08550 (1798029) | 1798029..1798361 | - | 333 | WP_239612373.1 | transcriptional regulator | - |
| HUZ57_RS08555 (1798370) | 1798370..1798675 | - | 306 | WP_021562855.1 | hypothetical protein | - |
| HUZ57_RS08560 (1798990) | 1798990..1799640 | - | 651 | WP_001095982.1 | LexA family transcriptional regulator | - |
| HUZ57_RS08565 (1799721) | 1799721..1799906 | + | 186 | WP_000276885.1 | Cro/CI family transcriptional regulator | - |
| HUZ57_RS08570 (1800022) | 1800022..1800318 | + | 297 | WP_000035948.1 | CII family transcriptional regulator | - |
| HUZ57_RS08575 (1800351) | 1800351..1800497 | + | 147 | WP_107182687.1 | DUF2740 family protein | - |
| HUZ57_RS08580 (1800490) | 1800490..1801389 | + | 900 | WP_217823673.1 | DNA replication protein | - |
| HUZ57_RS08585 (1801379) | 1801379..1802047 | + | 669 | Protein_1684 | DnaB-like helicase N-terminal domain-containing protein | - |
| HUZ57_RS08590 (1803077) | 1803077..1803844 | + | 768 | Protein_1685 | DnaB-like helicase C-terminal domain-containing protein | - |
| HUZ57_RS08595 (1803933) | 1803933..1804160 | + | 228 | WP_023241432.1 | hypothetical protein | - |
| HUZ57_RS08600 (1804150) | 1804150..1804575 | + | 426 | WP_227533683.1 | hypothetical protein | - |
| HUZ57_RS08605 (1804572) | 1804572..1805099 | + | 528 | WP_032162011.1 | phage N-6-adenine-methyltransferase | - |
| HUZ57_RS08610 (1805096) | 1805096..1805278 | + | 183 | WP_016063117.1 | NinE family protein | - |
| HUZ57_RS08615 (1805275) | 1805275..1805445 | + | 171 | WP_000566998.1 | protein NinF | - |
| HUZ57_RS08620 (1805438) | 1805438..1806160 | + | 723 | WP_001003984.1 | DNA-binding protein | - |
| HUZ57_RS08625 (1806160) | 1806160..1806450 | + | 291 | WP_000002248.1 | DUF1364 domain-containing protein | - |
| HUZ57_RS08630 (1806447) | 1806447..1806809 | + | 363 | WP_001008200.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HUZ57_RS08635 (1806806) | 1806806..1806994 | + | 189 | WP_000994516.1 | protein ninH | - |
| HUZ57_RS08640 (1806991) | 1806991..1807614 | + | 624 | WP_001235459.1 | antitermination protein | - |
| HUZ57_RS08645 (1808048) | 1808048..1808371 | + | 324 | WP_217823672.1 | phage holin, lambda family | - |
| HUZ57_RS08650 (1808355) | 1808355..1808831 | + | 477 | WP_112928118.1 | glycoside hydrolase family protein | - |
| HUZ57_RS08655 (1808828) | 1808828..1809265 | + | 438 | WP_217823671.1 | lysis protein | - |
| HUZ57_RS08660 (1809452) | 1809452..1809694 | + | 243 | WP_000807788.1 | DUF2560 family protein | - |
| HUZ57_RS08665 (1809697) | 1809697..1810137 | + | 441 | WP_000113732.1 | hypothetical protein | - |
| HUZ57_RS08670 (1810134) | 1810134..1811546 | + | 1413 | WP_000200760.1 | PBSX family phage terminase large subunit | - |
| HUZ57_RS08675 (1811549) | 1811549..1813675 | + | 2127 | WP_217823670.1 | portal protein | - |
| HUZ57_RS08680 (1813689) | 1813689..1814573 | + | 885 | WP_000426736.1 | hypothetical protein | - |
| HUZ57_RS08685 (1814585) | 1814585..1815481 | + | 897 | Protein_1704 | P22 phage major capsid protein family protein | - |
| HUZ57_RS08690 (1815534) | 1815534..1816762 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| HUZ57_RS08695 (1816776) | 1816776..1817192 | + | 417 | Protein_1706 | P22 phage major capsid protein family protein | - |
| HUZ57_RS08700 (1817235) | 1817235..1817420 | + | 186 | WP_000375637.1 | hypothetical protein | - |
| HUZ57_RS08705 (1817395) | 1817395..1817877 | + | 483 | WP_015966867.1 | packaged DNA stabilization gp4 family protein | - |
| HUZ57_RS08710 (1817886) | 1817886..1819304 | + | 1419 | WP_217823668.1 | packaged DNA stabilization protein gp10 | - |
| HUZ57_RS08715 (1819304) | 1819304..1820005 | + | 702 | WP_112918011.1 | phage tail protein | - |
| HUZ57_RS08720 (1820005) | 1820005..1820460 | + | 456 | WP_001525201.1 | DUF2824 family protein | - |
| HUZ57_RS08725 (1820463) | 1820463..1821155 | + | 693 | WP_000964872.1 | DNA transfer protein | - |
| HUZ57_RS08730 (1821166) | 1821166..1822515 | + | 1350 | WP_032219530.1 | DNA transfer protein | - |
| HUZ57_RS08735 (1822515) | 1822515..1823126 | + | 612 | Protein_1714 | DNA transfer protein | - |
| HUZ57_RS08740 (1824684) | 1824684..1825013 | - | 330 | WP_000895335.1 | hypothetical protein | - |
| HUZ57_RS08745 (1825388) | 1825388..1825831 | + | 444 | WP_032219532.1 | DUF4065 domain-containing protein | - |
| HUZ57_RS08750 (1825836) | 1825836..1826255 | + | 420 | WP_032219545.1 | hypothetical protein | - |
| HUZ57_RS08755 (1826268) | 1826268..1826519 | - | 252 | WP_032219533.1 | Arc family DNA-binding protein | - |
| HUZ57_RS08760 (1826543) | 1826543..1826800 | - | 258 | WP_032219535.1 | Arc family DNA-binding protein | - |
| HUZ57_RS08765 (1826906) | 1826906..1827046 | + | 141 | WP_001386205.1 | Arc family DNA-binding protein | - |
| HUZ57_RS08770 (1827310) | 1827310..1828233 | + | 924 | WP_206873833.1 | phage antirepressor N-terminal domain-containing protein | - |
| HUZ57_RS08775 (1828334) | 1828334..1830676 | + | 2343 | WP_239612374.1 | phage head-binding domain-containing protein | - |
| HUZ57_RS08780 (1831021) | 1831021..1831296 | + | 276 | WP_233706519.1 | hypothetical protein | - |
| HUZ57_RS08785 (1831910) | 1831910..1833076 | + | 1167 | WP_001310935.1 | serine-type D-Ala-D-Ala carboxypeptidase DacD | - |
| HUZ57_RS08790 (1833195) | 1833195..1833668 | + | 474 | WP_001105393.1 | DNA gyrase inhibitor SbmC | - |
| HUZ57_RS08795 (1833866) | 1833866..1834924 | + | 1059 | WP_001200905.1 | FUSC family protein | - |
| HUZ57_RS08800 (1835096) | 1835096..1835425 | + | 330 | WP_000450409.1 | DUF496 family protein | - |
| HUZ57_RS08805 (1835526) | 1835526..1835849 | - | 324 | WP_223216378.1 | EutP/PduV family microcompartment system protein | - |
| HUZ57_RS08810 (1835828) | 1835828..1835908 | + | 81 | WP_023441679.1 | hypothetical protein | - |
| HUZ57_RS08815 (1836197) | 1836197..1836277 | - | 81 | Protein_1730 | hypothetical protein | - |
| HUZ57_RS08820 (1836323) | 1836323..1836517 | - | 195 | WP_000988600.1 | DUF5983 family protein | - |
| HUZ57_RS08825 (1836514) | 1836514..1836888 | - | 375 | WP_039268420.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| HUZ57_RS08830 (1836977) | 1836977..1837345 | - | 369 | WP_001313071.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HUZ57_RS08835 (1837425) | 1837425..1837646 | - | 222 | WP_000692301.1 | DUF987 domain-containing protein | - |
| HUZ57_RS08840 (1837709) | 1837709..1838185 | - | 477 | WP_001186726.1 | RadC family protein | - |
| HUZ57_RS08845 (1838201) | 1838201..1838680 | - | 480 | WP_000860076.1 | antirestriction protein | - |
| HUZ57_RS08850 (1838762) | 1838762..1839583 | - | 822 | WP_001234530.1 | DUF932 domain-containing protein | - |
| HUZ57_RS08855 (1839804) | 1839804..1840136 | - | 333 | Protein_1738 | hypothetical protein | - |
| HUZ57_RS08865 (1840982) | 1840982..1841170 | + | 189 | Protein_1740 | IS4 family transposase | - |
| HUZ57_RS08870 (1841149) | 1841149..1841322 | + | 174 | Protein_1741 | cobalamin biosynthesis protein | - |
| HUZ57_RS08875 (1841474) | 1841474..1842019 | + | 546 | WP_000973176.1 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| HUZ57_RS08880 (1842016) | 1842016..1842759 | + | 744 | WP_001326708.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| HUZ57_RS08885 (1842771) | 1842771..1843850 | + | 1080 | WP_001166157.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| HUZ57_RS08890 (1843912) | 1843912..1844847 | + | 936 | WP_000986347.1 | L,D-transpeptidase | - |
| HUZ57_RS08900 (1845305) | 1845305..1846222 | + | 918 | WP_001011446.1 | nitrogen assimilation transcriptional regulator NAC | - |
| HUZ57_RS08905 (1846324) | 1846324..1847274 | + | 951 | WP_001011039.1 | HTH-type transcriptional regulator Cbl | - |
| HUZ57_RS08915 (1847392) | 1847392..1849035 | + | 1644 | WP_122653965.1 | toxic metabolite efflux MATE transporter YeeO | - |
| HUZ57_RS08925 (1849662) | 1849662..1850378 | - | 717 | WP_000532923.1 | hypothetical protein | VF |
| HUZ57_RS08930 (1850721) | 1850721..1852175 | - | 1455 | WP_001060244.1 | AMP nucleosidase | - |
| HUZ57_RS08935 (1852277) | 1852277..1853593 | - | 1317 | WP_000378594.1 | shikimate transporter | - |
| HUZ57_RS08940 (1853908) | 1853908..1854960 | + | 1053 | WP_039268417.1 | glycosyltransferase family 9 protein | - |
| HUZ57_RS08945 (1855222) | 1855222..1856514 | - | 1293 | Protein_1753 | invasin domain 3-containing protein | - |
| HUZ57_RS08950 (1856600) | 1856600..1857025 | + | 426 | WP_000422741.1 | transposase | - |
| HUZ57_RS08955 (1857022) | 1857022..1857372 | + | 351 | WP_000624722.1 | IS66 family insertion sequence element accessory protein TnpB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|