MGE detailed information
MGE type: Genomic_island MGE length: 21351 bp
Accession: NZ_CP054913 Location: 280520..301870 Organism: Shigella flexneri strain FDAARGOS_691 Replicon: chromosome
Accession: NZ_CP054913 Location: 280520..301870 Organism: Shigella flexneri strain FDAARGOS_691 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB99_RS01430 () | 276652..277596 | + | 945 | WP_000947076.1 | nickel ABC transporter permease subunit NikB | - |
| FOB99_RS01435 () | 277593..278426 | + | 834 | WP_001008973.1 | nickel ABC transporter permease subunit NikC | - |
| FOB99_RS01440 () | 278426..279190 | + | 765 | WP_001136253.1 | nickel import ATP-binding protein NikD | - |
| FOB99_RS01445 () | 279187..279993 | + | 807 | WP_000173660.1 | nickel import ATP-binding protein NikE | - |
| FOB99_RS01450 () | 279999..280400 | + | 402 | WP_001190062.1 | nickel-responsive transcriptional regulator NikR | - |
| FOB99_RS01455 () | 280520..280879 | - | 360 | WP_000593555.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| FOB99_RS01460 () | 280876..281151 | - | 276 | WP_001259384.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| FOB99_RS01465 () | 281210..282334 | - | 1125 | WP_001216257.1 | ABC transporter permease | - |
| FOB99_RS01470 () | 282334..285069 | - | 2736 | WP_000149170.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| FOB99_RS01475 () | 285066..286133 | - | 1068 | WP_000361470.1 | HlyD family secretion protein | - |
| FOB99_RS01480 () | 286499..288121 | - | 1623 | WP_005052620.1 | DUF4049 domain-containing protein | - |
| FOB99_RS01485 () | 288383..289972 | - | 1590 | WP_000643692.1 | DUF4049 domain-containing protein | - |
| FOB99_RS01490 () | 290469..291388 | + | 920 | Protein_288 | DUF2776 family protein | - |
| FOB99_RS01495 () | 291475..291951 | - | 477 | WP_000182502.1 | hypothetical protein | - |
| FOB99_RS01500 () | 291944..292708 | - | 765 | WP_000442141.1 | winged helix-turn-helix domain-containing protein | - |
| FOB99_RS01505 () | 292954..293714 | + | 761 | Protein_291 | response regulator transcription factor | - |
| FOB99_RS01510 () | 293821..294321 | - | 501 | WP_167389531.1 | hypothetical protein | - |
| FOB99_RS01515 () | 294472..295620 | - | 1149 | WP_005052604.1 | hypothetical protein | VF |
| FOB99_RS01520 () | 295712..296940 | + | 1229 | WP_094081542.1 | IS3 family transposase IS2 | Transposase |
| FOB99_RS01525 () | 296911..297198 | - | 288 | WP_077696389.1 | hypothetical protein | VF |
| FOB99_RS01530 () | 297195..298274 | - | 1080 | WP_005052551.1 | hypothetical protein | VF |
| FOB99_RS01535 () | 298318..299079 | - | 762 | WP_005090407.1 | hypothetical protein | VF |
| FOB99_RS01540 () | 299547..300281 | - | 735 | WP_000245840.1 | helix-turn-helix transcriptional regulator | - |
| FOB99_RS01545 () | 300281..301555 | - | 1275 | WP_005052544.1 | O-antigen ligase family protein | - |
| FOB99_RS01550 () | 301571..301863 | + | 293 | Protein_300 | IS3 family transposase ISSfl10 | Transposase |
| FOB99_RS01555 () | 301881..302578 | - | 698 | Protein_301 | IS1 family transposase | - |
| FOB99_RS01560 () | 303107..304306 | - | 1200 | WP_000439213.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| FOB99_RS01565 () | 304538..306037 | + | 1500 | WP_000902779.1 | inorganic phosphate transporter PitA | - |
| FOB99_RS01570 () | 306108..306443 | - | 336 | WP_000626187.1 | universal stress protein UspB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Shigella flexneri 5a str. M90T | Genomic island | TA120378 | NZ_CP037923 | 4222298..4243335 | 0.001 |