MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 91129 bp
Accession: NZ_CP054910 Location: 1..91129 Organism: Pantoea ananatis strain FDAARGOS_680 Replicon: plasmid unnamed2
Accession: NZ_CP054910 Location: 1..91129 Organism: Pantoea ananatis strain FDAARGOS_680 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB88_RS01325 () | 2494..3024 | + | 531 | WP_176017248.1 | hypothetical protein | - |
| FOB88_RS01330 () | 3190..5412 | + | 2223 | WP_176017249.1 | type IV conjugative transfer system coupling protein TraD | - |
| FOB88_RS01335 () | 5421..5819 | - | 399 | WP_139569196.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| FOB88_RS01340 () | 5819..6046 | - | 228 | WP_078004800.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| FOB88_RS01345 () | 6164..11404 | + | 5241 | WP_176017250.1 | Multifunctional conjugation protein TraI | Relaxase |
| FOB88_RS01350 () | 11406..12143 | + | 738 | WP_176017251.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| FOB88_RS01355 () | 12210..12932 | + | 723 | WP_176017252.1 | fertility inhibition protein FinO | - |
| FOB88_RS01360 () | 12925..13716 | + | 792 | WP_176017253.1 | DsbA family protein | - |
| FOB88_RS01365 () | 13733..13975 | + | 243 | Protein_9 | replication initiation protein | - |
| FOB88_RS01370 () | 15178..16419 | - | 1242 | WP_176017254.1 | hypothetical protein | - |
| FOB88_RS01375 () | 16449..17366 | - | 918 | WP_176017255.1 | cupin domain-containing protein | - |
| FOB88_RS01380 () | 17363..18526 | - | 1164 | WP_176017256.1 | hypothetical protein | - |
| FOB88_RS01385 () | 18537..19691 | - | 1155 | WP_176017257.1 | arginase family protein | - |
| FOB88_RS01390 () | 20067..20249 | + | 183 | WP_176017258.1 | hypothetical protein | - |
| FOB88_RS01395 () | 20826..21946 | - | 1121 | Protein_15 | IS3 family transposase ISRaq1 | Transposase |
| FOB88_RS01400 () | 22789..23511 | - | 723 | WP_029571274.1 | replication initiation protein | - |
| FOB88_RS01405 () | 23975..24178 | - | 204 | WP_176017259.1 | hypothetical protein | - |
| FOB88_RS01410 () | 24312..25376 | + | 1065 | WP_176017260.1 | HNH endonuclease | - |
| FOB88_RS01415 () | 25386..25892 | + | 507 | WP_176017261.1 | YrhA family protein | - |
| FOB88_RS01420 () | 25894..26562 | - | 669 | WP_176017262.1 | SOS response-associated peptidase family protein | - |
| FOB88_RS01425 () | 26623..26865 | + | 243 | WP_019105440.1 | DNA polymerase III subunit theta | - |
| FOB88_RS01430 () | 26881..27501 | - | 621 | WP_176017309.1 | hypothetical protein | - |
| FOB88_RS01435 () | 27663..28187 | + | 525 | WP_176017263.1 | phospholipase D family protein | - |
| FOB88_RS01440 () | 28242..29528 | + | 1287 | WP_176017264.1 | DUF1173 family protein | - |
| FOB88_RS01445 () | 29552..30343 | + | 792 | WP_176017265.1 | hypothetical protein | - |
| FOB88_RS01450 () | 30510..31142 | + | 633 | WP_176017266.1 | hypothetical protein | - |
| FOB88_RS01455 () | 31132..31812 | + | 681 | WP_176017267.1 | hypothetical protein | - |
| FOB88_RS01460 () | 31809..32543 | - | 735 | WP_116585312.1 | tyrosine-type recombinase/integrase | - |
| FOB88_RS01465 () | 32902..35610 | + | 2709 | WP_176017268.1 | DNA repair protein | - |
| FOB88_RS01470 () | 35958..40004 | + | 4047 | WP_176017269.1 | hypothetical protein | - |
| FOB88_RS01475 () | 40344..40901 | - | 558 | WP_176017270.1 | DNA-binding protein | - |
| FOB88_RS01480 () | 41789..42433 | + | 645 | WP_176017271.1 | ParA family protein | - |
| FOB88_RS01485 () | 42528..42812 | + | 285 | WP_176017272.1 | molecular chaperone GroEL | - |
| FOB88_RS01490 () | 42949..43191 | + | 243 | WP_176017273.1 | hypothetical protein | - |
| FOB88_RS01495 () | 43269..43955 | + | 687 | Protein_35 | hypothetical protein | - |
| FOB88_RS01500 () | 44030..45304 | - | 1275 | WP_176017310.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| FOB88_RS01505 () | 45582..46601 | - | 1020 | WP_176017274.1 | IS110 family transposase ISEc11 | Transposase |
| FOB88_RS01510 () | 46741..47196 | - | 456 | WP_176017275.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| FOB88_RS01515 () | 47621..47863 | + | 243 | WP_176017276.1 | XRE family transcriptional regulator | - |
| FOB88_RS01520 () | 48129..48443 | - | 315 | WP_176017277.1 | hypothetical protein | - |
| FOB88_RS01525 () | 48502..48690 | - | 189 | WP_176017278.1 | hypothetical protein | - |
| FOB88_RS01530 () | 49003..49977 | + | 975 | WP_176017279.1 | IS110 family transposase ISGme8 | Transposase |
| FOB88_RS01535 () | 50085..50681 | - | 597 | WP_010261183.1 | glutathione S-transferase family protein | - |
| FOB88_RS01540 () | 50905..51396 | + | 492 | WP_176017280.1 | GNAT family N-acetyltransferase | - |
| FOB88_RS01545 () | 52205..52543 | - | 339 | WP_176017281.1 | hypothetical protein | - |
| FOB88_RS01550 () | 52540..52785 | - | 246 | WP_176017282.1 | hypothetical protein | - |
| FOB88_RS01555 () | 52819..53739 | - | 921 | WP_176017311.1 | DUF1281 domain-containing protein | - |
| FOB88_RS01560 () | 54318..54593 | - | 276 | WP_110015849.1 | hypothetical protein | - |
| FOB88_RS01565 () | 54823..55731 | - | 909 | WP_176017283.1 | HTH-type transcriptional regulator PgrR | VF |
| FOB88_RS01570 () | 55835..56947 | + | 1113 | WP_176017312.1 | FAD-dependent monooxygenase | - |
| FOB88_RS01575 () | 57272..58801 | + | 1530 | WP_176017284.1 | IS21 family transposase ISVch3 | Transposase |
| FOB88_RS01580 () | 58812..59555 | + | 744 | WP_050863307.1 | IS21 family transposase ISVch3 | Transposase |
| FOB88_RS01585 () | 59948..60211 | - | 264 | WP_174260965.1 | hypothetical protein | - |
| FOB88_RS01590 () | 60490..62070 | - | 1581 | WP_176017285.1 | IS66 family transposase ISCro1 | Transposase |
| FOB88_RS01595 () | 62090..62437 | - | 348 | WP_176017286.1 | IS66 family transposase ISCro1 | Transposase |
| FOB88_RS01600 () | 62434..63066 | - | 633 | WP_116585157.1 | IS66 family transposase ISCro1 | Transposase |
| FOB88_RS01605 () | 63678..63908 | + | 231 | WP_047359683.1 | DUF905 domain-containing protein | - |
| FOB88_RS01610 () | 63981..65990 | + | 2010 | WP_176017287.1 | ParB/RepB/Spo0J family partition protein | - |
| FOB88_RS01615 () | 66033..66464 | + | 432 | WP_032637363.1 | conjugation system SOS inhibitor PsiB | - |
| FOB88_RS01620 () | 66461..67189 | + | 729 | WP_176017288.1 | plasmid SOS inhibition protein A | - |
| FOB88_RS01625 () | 67186..67509 | + | 324 | WP_176017289.1 | theronine dehydrogenase | - |
| FOB88_RS01630 () | 67576..67938 | + | 363 | WP_176017313.1 | hypothetical protein | - |
| FOB88_RS01635 () | 68585..68992 | + | 408 | WP_100663247.1 | ammonia monooxygenase | - |
| FOB88_RS01640 () | 69043..69330 | + | 288 | WP_176017290.1 | hypothetical protein | - |
| FOB88_RS01645 () | 69377..69721 | + | 345 | WP_016582953.1 | hypothetical protein | - |
| FOB88_RS01650 () | 69807..70070 | + | 264 | WP_008324174.1 | hypothetical protein | - |
| FOB88_RS01655 () | 70113..70943 | + | 831 | WP_176017291.1 | N-6 DNA methylase | - |
| FOB88_RS01660 () | 71536..72066 | + | 531 | WP_016589473.1 | antirestriction protein | - |
| FOB88_RS01665 () | 72111..72587 | - | 477 | WP_176017292.1 | hypothetical protein | VF |
| FOB88_RS01670 () | 73020..73412 | + | 393 | WP_176017293.1 | relaxosome protein TraM | - |
| FOB88_RS01675 () | 73601..74299 | + | 699 | WP_176017294.1 | PAS fold family protein | - |
| FOB88_RS01680 () | 74377..74601 | + | 225 | WP_008324165.1 | TraY domain-containing protein | - |
| FOB88_RS01685 () | 74659..75009 | + | 351 | WP_176017295.1 | type IV conjugative transfer system pilin TraA | - |
| FOB88_RS01690 () | 75160..75465 | + | 306 | WP_008324160.1 | type IV conjugative transfer system protein TraL | - |
| FOB88_RS01695 () | 75480..76046 | + | 567 | WP_123061127.1 | type IV conjugative transfer system protein TraE | - |
| FOB88_RS01700 () | 76033..76776 | + | 744 | WP_176017296.1 | type-F conjugative transfer system secretin TraK | - |
| FOB88_RS01705 () | 76763..78157 | + | 1395 | WP_176017297.1 | conjugal transfer protein TraB | - |
| FOB88_RS01710 () | 78179..78718 | + | 540 | WP_176017298.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FOB88_RS01715 () | 78838..79062 | + | 225 | WP_176017299.1 | TraR/DksA C4-type zinc finger protein | - |
| FOB88_RS01720 () | 79232..79528 | + | 297 | WP_176017300.1 | hypothetical protein | - |
| FOB88_RS01725 () | 79518..80042 | + | 525 | WP_176017301.1 | conjugal transfer protein TraP | - |
| FOB88_RS01730 () | 80035..82665 | + | 2631 | WP_176017302.1 | type IV secretion system protein TraC | - |
| FOB88_RS01735 () | 82662..83009 | + | 348 | WP_049047524.1 | type-F conjugative transfer system protein TrbI | - |
| FOB88_RS01740 () | 83009..83656 | + | 648 | WP_176017303.1 | type-F conjugative transfer system protein TraW | - |
| FOB88_RS01745 () | 83659..84645 | + | 987 | WP_176017314.1 | conjugal transfer pilus assembly protein TraU | - |
| FOB88_RS01750 () | 84661..85290 | + | 630 | WP_176017304.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FOB88_RS01755 () | 85287..87167 | + | 1881 | WP_176017305.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FOB88_RS01760 () | 87178..87933 | + | 756 | WP_176017306.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FOB88_RS01765 () | 87950..88198 | + | 249 | WP_008324126.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FOB88_RS01770 () | 88188..88742 | + | 555 | WP_176017307.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FOB88_RS01775 () | 88735..89163 | + | 429 | WP_176017308.1 | conjugal transfer protein TrbF | - |
| FOB88_RS01780 () | 89150..90520 | + | 1371 | WP_096198068.1 | conjugal transfer protein TraH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|