MGE detailed information
MGE type: Genomic_island MGE length: 10053 bp
Accession: NZ_CP054871 Location: 2653920..2663972 Organism: Pseudomonas protegens strain PPRAR07 Replicon: chromosome
Accession: NZ_CP054871 Location: 2653920..2663972 Organism: Pseudomonas protegens strain PPRAR07 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUT23_RS12200 (HUT23_12215) | 2649265..2650221 | - | 957 | WP_210456996.1 | nucleoside-specific channel-forming protein Tsx | - |
| HUT23_RS12205 (HUT23_12220) | 2650483..2650884 | + | 402 | WP_232642573.1 | nuclear transport factor 2 family protein | - |
| HUT23_RS12210 (HUT23_12225) | 2650928..2651962 | + | 1035 | WP_015635068.1 | selenide, water dikinase SelD | - |
| HUT23_RS12215 (HUT23_12230) | 2651962..2653065 | + | 1104 | WP_210456994.1 | tRNA 2-selenouridine(34) synthase MnmH | - |
| HUT23_RS12220 (HUT23_12235) | 2653118..2653459 | - | 342 | WP_053157594.1 | DUF3077 domain-containing protein | - |
| HUT23_RS12225 (HUT23_12240) | 2653920..2654261 | - | 342 | WP_072451388.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| HUT23_RS12230 (HUT23_12245) | 2654258..2654509 | - | 252 | WP_019094202.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| HUT23_RS12235 (HUT23_12250) | 2654598..2655653 | - | 1056 | WP_210456992.1 | permease | - |
| HUT23_RS12240 (HUT23_12255) | 2656188..2656964 | - | 777 | WP_011060579.1 | IclR family transcriptional regulator | - |
| HUT23_RS12245 (HUT23_12260) | 2657136..2657906 | + | 771 | WP_183000119.1 | ABC transporter substrate-binding protein | - |
| HUT23_RS12250 (HUT23_12265) | 2657967..2658623 | + | 657 | WP_011060581.1 | amino acid ABC transporter permease | - |
| HUT23_RS12255 (HUT23_12270) | 2658620..2659366 | + | 747 | WP_011060582.1 | hypothetical protein | VF |
| HUT23_RS12260 (HUT23_12275) | 2659363..2660652 | + | 1290 | WP_210456990.1 | FAD-binding oxidoreductase | - |
| HUT23_RS12265 (HUT23_12280) | 2660653..2661327 | - | 675 | WP_172681988.1 | histidine phosphatase family protein | - |
| HUT23_RS12270 (HUT23_12285) | 2661555..2662259 | + | 705 | WP_011060585.1 | glutathione binding-like protein | - |
| HUT23_RS12275 (HUT23_12290) | 2662477..2663379 | + | 903 | WP_210456986.1 | hypothetical protein | VF |
| HUT23_RS12280 (HUT23_12295) | 2663376..2663972 | + | 597 | WP_210456985.1 | hypothetical protein | - |
| HUT23_RS12285 (HUT23_12300) | 2664259..2665233 | + | 975 | WP_015635078.1 | porphobilinogen synthase | - |
| HUT23_RS12290 (HUT23_12305) | 2665344..2665865 | + | 522 | WP_210456983.1 | sigma-70 family RNA polymerase sigma factor | - |
| HUT23_RS12295 (HUT23_12310) | 2665862..2666833 | + | 972 | WP_174395030.1 | FecR family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|