MGE detailed information
MGE type: Prophage MGE length: 53281 bp
Accession: NZ_CP054662 Location: 2597059..2650339 Organism: Escherichia coli strain IGC_RcoliRes_1.1 Replicon: chromosome
Accession: NZ_CP054662 Location: 2597059..2650339 Organism: Escherichia coli strain IGC_RcoliRes_1.1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUR93_RS12820 (2592311) | 2592311..2593021 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| HUR93_RS12825 (2593024) | 2593024..2593584 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| HUR93_RS12830 (2593619) | 2593619..2593960 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| HUR93_RS12835 (2594095) | 2594095..2594421 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| HUR93_RS12840 (2594627) | 2594627..2595840 | + | 1214 | Protein_2518 | starvation-sensing protein RspA | - |
| HUR93_RS12845 (2595852) | 2595852..2596871 | + | 1020 | WP_000836079.1 | Zn-dependent oxidoreductase | - |
| HUR93_RS12850 (2597059) | 2597059..2598339 | - | 1281 | WP_000876979.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| HUR93_RS12855 (2598374) | 2598374..2598625 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| HUR93_RS12860 (2598698) | 2598698..2601169 | - | 2472 | WP_061892365.1 | exonuclease | - |
| HUR93_RS12865 (2601263) | 2601263..2601454 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| HUR93_RS12870 (2601451) | 2601451..2601639 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| HUR93_RS12875 (2602144) | 2602144..2602464 | + | 321 | WP_122986851.1 | hypothetical protein | - |
| HUR93_RS12880 (2602451) | 2602451..2602702 | - | 252 | WP_122986852.1 | hypothetical protein | - |
| HUR93_RS12885 (2602704) | 2602704..2602859 | - | 156 | WP_000379589.1 | DUF1391 family protein | - |
| HUR93_RS12890 (2603051) | 2603051..2603458 | - | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| HUR93_RS12895 (2603536) | 2603536..2603763 | + | 228 | WP_000476993.1 | Cro/CI family transcriptional regulator | - |
| HUR93_RS12900 (2603747) | 2603747..2604268 | + | 522 | WP_000705349.1 | toxin YdaT family protein | - |
| HUR93_RS12905 (2604249) | 2604249..2605214 | + | 966 | WP_000054504.1 | hypothetical protein | - |
| HUR93_RS12910 (2605255) | 2605255..2605674 | + | 420 | WP_001151195.1 | DUF977 family protein | - |
| HUR93_RS12915 (2605729) | 2605729..2606778 | + | 1050 | Protein_2533 | ISNCY family transposase ISCARN112 | Transposase |
| HUR93_RS12920 (2606899) | 2606899..2607048 | + | 150 | WP_180302674.1 | ISNCY family transposase ISCARN112 | Transposase |
| HUR93_RS12925 (2607485) | 2607485..2607817 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| HUR93_RS12930 (2608020) | 2608020..2608325 | - | 306 | WP_071527819.1 | protein YdfV | - |
| HUR93_RS12935 (2608350) | 2608350..2608589 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| HUR93_RS12940 (2608589) | 2608589..2608876 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| HUR93_RS12945 (2608936) | 2608936..2609004 | + | 69 | Protein_2539 | type I toxin-antitoxin system toxin HokD | - |
| HUR93_RS12950 (2609221) | 2609221..2609472 | + | 252 | WP_000980994.1 | protein Rem | - |
| HUR93_RS12955 (2609539) | 2609539..2609817 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| HUR93_RS12960 (2609819) | 2609819..2610868 | + | 1050 | WP_053292618.1 | DUF968 domain-containing protein | - |
| HUR93_RS12965 (2610881) | 2610881..2611237 | + | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HUR93_RS12970 (2611252) | 2611252..2612073 | + | 822 | WP_000762885.1 | antitermination protein | - |
| HUR93_RS12985 (2612969) | 2612969..2613100 | + | 132 | WP_047626566.1 | DUF3927 family protein | - |
| HUR93_RS12990 (2613194) | 2613194..2613325 | - | 132 | Protein_2546 | hypothetical protein | - |
| HUR93_RS12995 (2613635) | 2613635..2613895 | + | 261 | Protein_2547 | cell envelope integrity protein TolA | - |
| HUR93_RS13000 (2614067) | 2614067..2614441 | + | 375 | WP_001348108.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| HUR93_RS13005 (2614693) | 2614693..2614908 | + | 216 | WP_000839562.1 | phage lysis protein EssD | - |
| HUR93_RS13010 (2614913) | 2614913..2615224 | + | 312 | WP_000189918.1 | DUF1327 domain-containing protein | - |
| HUR93_RS13015 (2615221) | 2615221..2615754 | + | 534 | WP_001092966.1 | lysozyme | - |
| HUR93_RS13020 (2615751) | 2615751..2616248 | + | 498 | WP_001071776.1 | DUF2514 domain-containing protein | - |
| HUR93_RS13025 (2616612) | 2616612..2616824 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| HUR93_RS13030 (2616835) | 2616835..2617023 | + | 189 | WP_071526745.1 | cold-shock protein | - |
| HUR93_RS13035 (2617026) | 2617026..2617064 | + | 39 | WP_223367339.1 | hypothetical protein | - |
| HUR93_RS13040 (2617171) | 2617171..2617326 | + | 156 | WP_001443523.1 | hypothetical protein | - |
| HUR93_RS13045 (2617499) | 2617499..2617672 | + | 174 | WP_001019207.1 | addiction module toxin, GnsA/GnsB family | - |
| HUR93_RS13050 (2617968) | 2617968..2618174 | + | 207 | WP_000548593.1 | hypothetical protein | - |
| HUR93_RS13055 (2618737) | 2618737..2619264 | + | 528 | WP_001389340.1 | DUF1441 family protein | - |
| HUR93_RS13060 (2619273) | 2619273..2621372 | + | 2100 | WP_061892321.1 | phage terminase large subunit family protein | - |
| HUR93_RS13065 (2621369) | 2621369..2621581 | + | 213 | WP_021545871.1 | hypothetical protein | - |
| HUR93_RS13070 (2621581) | 2621581..2623089 | + | 1509 | WP_021542121.1 | phage portal protein | - |
| HUR93_RS13075 (2623034) | 2623034..2625061 | + | 2028 | WP_001136588.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| HUR93_RS13080 (2625148) | 2625148..2625471 | + | 324 | WP_001097041.1 | DUF2190 family protein | - |
| HUR93_RS13085 (2625464) | 2625464..2625739 | + | 276 | WP_024207680.1 | DNA breaking-rejoining protein | - |
| HUR93_RS13090 (2625751) | 2625751..2626329 | + | 579 | WP_061892320.1 | phage tail protein | - |
| HUR93_RS13095 (2626326) | 2626326..2626727 | + | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| HUR93_RS13100 (2626738) | 2626738..2627481 | + | 744 | WP_000211131.1 | phage tail protein | - |
| HUR93_RS13105 (2627542) | 2627542..2627928 | + | 387 | WP_001384509.1 | phage minor tail protein G | - |
| HUR93_RS13110 (2627937) | 2627937..2628266 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| HUR93_RS13115 (2628238) | 2628238..2631303 | + | 3066 | WP_061892319.1 | phage tail tape measure protein | - |
| HUR93_RS13120 (2631303) | 2631303..2631632 | + | 330 | WP_000447251.1 | phage tail protein | - |
| HUR93_RS13125 (2631642) | 2631642..2632340 | + | 699 | WP_001152368.1 | phage minor tail protein L | - |
| HUR93_RS13130 (2632345) | 2632345..2633088 | + | 744 | WP_000140707.1 | C40 family peptidase | - |
| HUR93_RS13135 (2632986) | 2632986..2633633 | + | 648 | WP_073972164.1 | tail assembly protein | - |
| HUR93_RS13140 (2633694) | 2633694..2637089 | + | 3396 | WP_065225634.1 | host specificity protein J | - |
| HUR93_RS13145 (2637157) | 2637157..2637756 | + | 600 | WP_061892317.1 | hypothetical protein | VF |
| HUR93_RS13150 (2637821) | 2637821..2641219 | + | 3399 | WP_073972162.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HUR93_RS13155 (2641360) | 2641360..2642106 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| HUR93_RS13160 (2642121) | 2642121..2643662 | - | 1542 | WP_061892665.1 | IS21 family transposase ISEc12 | Transposase |
| HUR93_RS13165 (2643843) | 2643843..2644382 | + | 540 | WP_237897907.1 | tail fiber assembly protein | - |
| HUR93_RS13170 (2644480) | 2644480..2645070 | - | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HUR93_RS13175 (2645387) | 2645387..2645620 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| HUR93_RS13180 (2645689) | 2645689..2645802 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| HUR93_RS13185 (2646404) | 2646404..2647687 | + | 1284 | Protein_2585 | MHS family MFS transporter YdfJ | - |
| HUR93_RS13190 (2647776) | 2647776..2649236 | + | 1461 | Protein_2586 | mannitol dehydrogenase family protein | - |
| HUR93_RS13195 (2649272) | 2649272..2649475 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| HUR93_RS13200 (2649653) | 2649653..2650339 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| HUR93_RS13205 (2650428) | 2650428..2651174 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| HUR93_RS13210 (2651311) | 2651311..2653356 | + | 2046 | WP_001296767.1 | peptidyl-dipeptidase Dcp | - |
| HUR93_RS13215 (2653401) | 2653401..2653919 | - | 519 | WP_001024561.1 | 2-oxo-tetronate isomerase | - |
| HUR93_RS13220 (2654195) | 2654195..2654587 | + | 393 | WP_000671730.1 | YdeI family stress tolerance OB fold protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|