MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 121129 bp
Accession: NZ_CP054581 Location: 5793313..5914441 Organism: Pseudomonas aeruginosa strain YTSEY8 Replicon: chromosome
Accession: NZ_CP054581 Location: 5793313..5914441 Organism: Pseudomonas aeruginosa strain YTSEY8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUF04_RS27495 () | 5788717..5790972 | - | 2256 | WP_003104913.1 | DUF1631 domain-containing protein | - |
| HUF04_RS27500 () | 5791258..5792106 | + | 849 | WP_003116246.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| HUF04_RS27510 () | 5792308..5792757 | - | 450 | WP_003112842.1 | type 4a pilus biogenesis protein PilA | - |
| HUF04_RS27515 () | 5792989..5794689 | + | 1701 | WP_003112841.1 | type IV-A pilus assembly ATPase PilB | - |
| HUF04_RS27520 () | 5794693..5795913 | + | 1221 | WP_003112840.1 | Type II secretion system protein F | VF |
| HUF04_RS27525 () | 5795917..5796789 | + | 873 | WP_034040535.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| HUF04_RS27530 () | 5796786..5797397 | + | 612 | WP_034040533.1 | dephospho-CoA kinase | - |
| HUF04_RS27535 () | 5797394..5797594 | + | 201 | WP_003094656.1 | DNA gyrase inhibitor YacG | - |
| HUF04_RS27540 () | 5797631..5797840 | - | 210 | WP_003094660.1 | hypothetical protein | - |
| HUF04_RS27545 () | 5797946..5798635 | - | 690 | WP_003103868.1 | energy-coupling factor ABC transporter permease | - |
| HUF04_RS27550 () | 5798632..5799102 | - | 471 | WP_034040530.1 | hypothetical protein | - |
| HUF04_RS27555 () | 5799099..5799524 | - | 426 | WP_009875877.1 | GNAT family N-acetyltransferase | - |
| HUF04_RS27560 () | 5799657..5800286 | + | 630 | WP_003094668.1 | DUF1780 domain-containing protein | - |
| HUF04_RS27565 () | 5800283..5800732 | + | 450 | WP_003094670.1 | MOSC domain-containing protein | - |
| HUF04_RS27570 () | 5800758..5800928 | + | 171 | WP_003094672.1 | DUF3094 family protein | - |
| HUF04_RS27575 () | 5800992..5802299 | + | 1308 | WP_003112837.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| HUF04_RS27580 () | 5802339..5803430 | - | 1092 | WP_073637097.1 | cell division protein ZapE | - |
| HUF04_RS27585 () | 5803979..5805616 | + | 1638 | WP_034040527.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| HUF04_RS27590 () | 5805665..5809863 | + | 4199 | Protein_5458 | Heme/hemopexin-binding protein | VF |
| HUF04_RS27595 () | 5810233..5811099 | + | 867 | WP_003111785.1 | ParA family protein | - |
| HUF04_RS27600 () | 5811101..5811838 | + | 738 | WP_003111784.1 | hypothetical protein | - |
| HUF04_RS27605 () | 5811835..5812332 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| HUF04_RS27610 () | 5812338..5813039 | + | 702 | WP_023443554.1 | DUF2786 domain-containing protein | - |
| HUF04_RS27615 () | 5813036..5813764 | + | 729 | WP_003111781.1 | HNH endonuclease | - |
| HUF04_RS27620 () | 5813748..5813972 | + | 225 | WP_003111780.1 | hypothetical protein | - |
| HUF04_RS27625 () | 5813969..5815312 | + | 1344 | WP_010792218.1 | replicative DNA helicase | - |
| HUF04_RS27630 () | 5815751..5816197 | - | 447 | WP_003117028.1 | hypothetical protein | - |
| HUF04_RS27635 () | 5816381..5817340 | + | 960 | WP_023082651.1 | hypothetical protein | - |
| HUF04_RS27640 () | 5817747..5817932 | + | 186 | WP_003157042.1 | hypothetical protein | - |
| HUF04_RS27645 () | 5817922..5818449 | + | 528 | WP_003448815.1 | hypothetical protein | - |
| HUF04_RS27650 () | 5818446..5818703 | + | 258 | WP_003448812.1 | hypothetical protein | - |
| HUF04_RS27655 () | 5818696..5818935 | + | 240 | WP_023082652.1 | hypothetical protein | - |
| HUF04_RS27660 () | 5818928..5819161 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| HUF04_RS27665 () | 5819161..5820183 | + | 1023 | WP_010792224.1 | nucleoid-associated protein YejK | - |
| HUF04_RS27670 () | 5820180..5821070 | + | 891 | WP_003119279.1 | DNA adenine methylase | - |
| HUF04_RS27675 () | 5821091..5821360 | + | 270 | WP_003448782.1 | Arc family DNA-binding protein | - |
| HUF04_RS27680 () | 5821357..5823090 | + | 1734 | WP_003448780.1 | ParB family protein | - |
| HUF04_RS27685 () | 5823118..5823873 | + | 756 | WP_003121580.1 | DUF2857 domain-containing protein | - |
| HUF04_RS27690 () | 5823876..5825201 | + | 1326 | WP_031675614.1 | hypothetical protein | - |
| HUF04_RS27695 () | 5826425..5827060 | + | 636 | WP_079866755.1 | hypothetical protein | - |
| HUF04_RS27700 () | 5827326..5828054 | + | 729 | WP_003448749.1 | TIGR03761 family integrating conjugative element protein | - |
| HUF04_RS27705 () | 5828060..5828608 | + | 549 | WP_016851606.1 | DUF3158 family protein | - |
| HUF04_RS27710 () | 5828656..5829486 | + | 831 | WP_012076855.1 | phage regulatory protein | - |
| HUF04_RS27715 () | 5829516..5829974 | + | 459 | WP_016851607.1 | single-stranded DNA-binding protein | - |
| HUF04_RS27720 () | 5830080..5830274 | + | 195 | WP_016851608.1 | hypothetical protein | - |
| HUF04_RS27725 () | 5830519..5830686 | + | 168 | WP_170323396.1 | CrpP family protein | - |
| HUF04_RS27730 () | 5830802..5832721 | + | 1920 | WP_023101571.1 | type I DNA topoisomerase | - |
| HUF04_RS27735 () | 5833028..5833237 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| HUF04_RS27740 () | 5833459..5835348 | + | 1890 | WP_016851610.1 | hypothetical protein | - |
| HUF04_RS27745 () | 5835345..5837321 | + | 1977 | WP_016851611.1 | DEAD/DEAH box helicase | - |
| HUF04_RS27750 () | 5837462..5837806 | + | 345 | WP_016851612.1 | hypothetical protein | - |
| HUF04_RS27755 () | 5837877..5838167 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| HUF04_RS27760 () | 5838164..5838463 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HUF04_RS27765 () | 5838665..5839789 | + | 1125 | WP_012076859.1 | hypothetical protein | VF |
| HUF04_RS27770 () | 5839789..5841498 | + | 1710 | WP_012076860.1 | Outer membrane lipoprotein BfpB | VF |
| HUF04_RS27775 () | 5841502..5842827 | + | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| HUF04_RS27780 () | 5842817..5843350 | + | 534 | WP_202096777.1 | type IV pilus biogenesis protein PilP | - |
| HUF04_RS27785 () | 5843359..5844939 | + | 1581 | WP_003099761.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| HUF04_RS27790 () | 5844939..5846018 | + | 1080 | WP_003099764.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HUF04_RS27795 () | 5846040..5846570 | + | 531 | WP_003120996.1 | pilus assembly protein PilX | - |
| HUF04_RS27800 () | 5846567..5847523 | + | 957 | WP_003448639.1 | Twitching mobility protein | VF |
| HUF04_RS27805 () | 5847516..5848895 | + | 1380 | WP_003099769.1 | hypothetical protein | VF |
| HUF04_RS27810 () | 5848913..5849350 | + | 438 | WP_003120998.1 | hypothetical protein | VF |
| HUF04_RS27815 () | 5850272..5850838 | + | 567 | WP_003120999.1 | hypothetical protein | - |
| HUF04_RS27820 () | 5850915..5851094 | + | 180 | WP_004347955.1 | hypothetical protein | - |
| HUF04_RS27825 () | 5851553..5852041 | + | 489 | WP_003448595.1 | DUF3577 domain-containing protein | - |
| HUF04_RS27830 () | 5852179..5852337 | + | 159 | WP_003121002.1 | hypothetical protein | - |
| HUF04_RS27835 () | 5852411..5852608 | + | 198 | WP_003448593.1 | hypothetical protein | - |
| HUF04_RS27840 () | 5852800..5853513 | + | 714 | WP_003121003.1 | hypothetical protein | - |
| HUF04_RS27845 () | 5853749..5854099 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| HUF04_RS27850 () | 5854156..5854788 | + | 633 | WP_003099792.1 | DUF3275 family protein | - |
| HUF04_RS27855 () | 5854785..5855060 | + | 276 | WP_003099794.1 | hypothetical protein | - |
| HUF04_RS27860 () | 5855130..5855492 | + | 363 | WP_003099795.1 | hypothetical protein | - |
| HUF04_RS27865 () | 5855560..5855820 | + | 261 | WP_003099797.1 | hypothetical protein | - |
| HUF04_RS27870 () | 5855913..5856518 | + | 606 | WP_003099799.1 | hypothetical protein | - |
| HUF04_RS27875 () | 5856548..5857993 | + | 1446 | WP_003099801.1 | class I SAM-dependent methyltransferase | - |
| HUF04_RS27880 () | 5858098..5860347 | + | 2250 | WP_003099803.1 | DEAD/DEAH box helicase | - |
| HUF04_RS27885 () | 5860668..5860922 | - | 255 | WP_003099808.1 | hypothetical protein | - |
| HUF04_RS27890 () | 5861563..5861760 | - | 198 | WP_003099811.1 | hypothetical protein | - |
| HUF04_RS27895 () | 5861978..5862676 | + | 699 | WP_023094353.1 | hypothetical protein | - |
| HUF04_RS27900 () | 5862687..5863442 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| HUF04_RS27905 () | 5863427..5864008 | + | 582 | WP_003117072.1 | hypothetical protein | VF |
| HUF04_RS27910 () | 5864005..5864505 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| HUF04_RS27915 () | 5864577..5864783 | + | 207 | WP_073689213.1 | hypothetical protein | - |
| HUF04_RS27920 () | 5864787..5867018 | + | 2232 | WP_003099821.1 | type IV conjugative transfer system coupling protein TraD | - |
| HUF04_RS27925 () | 5867018..5867764 | + | 747 | WP_003099824.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| HUF04_RS27930 () | 5867782..5868273 | + | 492 | WP_003099826.1 | hypothetical protein | - |
| HUF04_RS27935 () | 5868515..5869276 | + | 762 | Protein_5527 | UvrD-helicase domain-containing protein | - |
| HUF04_RS27940 () | 5869401..5869760 | - | 360 | WP_003094179.1 | hypothetical protein | - |
| HUF04_RS27945 () | 5869763..5870326 | - | 564 | WP_031630708.1 | regulatory protein GemA | - |
| HUF04_RS27950 () | 5870313..5870780 | - | 468 | WP_202096778.1 | hypothetical protein | - |
| HUF04_RS27955 () | 5870780..5870971 | - | 192 | WP_023081749.1 | hypothetical protein | - |
| HUF04_RS27960 () | 5870973..5871662 | - | 690 | WP_003094188.1 | DUF2786 domain-containing protein | - |
| HUF04_RS27965 () | 5871664..5872287 | - | 624 | WP_014603988.1 | DUF3164 family protein | - |
| HUF04_RS27970 () | 5872280..5872480 | - | 201 | WP_010791825.1 | hypothetical protein | - |
| HUF04_RS27975 () | 5872473..5873006 | - | 534 | WP_031299623.1 | hypothetical protein | - |
| HUF04_RS27980 () | 5872996..5873676 | - | 681 | WP_031630706.1 | hypothetical protein | - |
| HUF04_RS27985 () | 5873676..5873960 | - | 285 | WP_014603990.1 | hypothetical protein | - |
| HUF04_RS27990 () | 5873957..5874298 | - | 342 | WP_031630705.1 | hypothetical protein | - |
| HUF04_RS27995 () | 5874300..5875466 | - | 1167 | WP_016852441.1 | AAA family ATPase | - |
| HUF04_RS28000 () | 5875466..5877250 | - | 1785 | WP_202096779.1 | hypothetical protein ; Integrase | Integrase |
| HUF04_RS28005 () | 5877254..5878231 | - | 978 | WP_058143754.1 | hypothetical protein | - |
| HUF04_RS28010 () | 5878241..5878555 | - | 315 | WP_034019336.1 | hypothetical protein | - |
| HUF04_RS28015 () | 5878552..5878812 | - | 261 | WP_034019334.1 | hypothetical protein | - |
| HUF04_RS28020 () | 5878805..5879293 | - | 489 | WP_023442737.1 | hypothetical protein | - |
| HUF04_RS28025 () | 5879417..5879641 | + | 225 | WP_015649394.1 | hypothetical protein | - |
| HUF04_RS28030 () | 5879926..5880156 | - | 231 | WP_202096780.1 | DNA-binding protein | - |
| HUF04_RS28035 () | 5880221..5880607 | + | 387 | WP_078464142.1 | helix-turn-helix domain-containing protein | - |
| HUF04_RS28040 () | 5880624..5881127 | + | 504 | WP_074196887.1 | hypothetical protein | - |
| HUF04_RS28045 () | 5881132..5881575 | + | 444 | WP_124084312.1 | hypothetical protein | - |
| HUF04_RS28050 () | 5881600..5881974 | - | 375 | WP_029981997.1 | hypothetical protein | - |
| HUF04_RS28055 () | 5882187..5882444 | + | 258 | WP_003094225.1 | membrane protein | - |
| HUF04_RS28060 () | 5882447..5882605 | + | 159 | WP_162835812.1 | hypothetical protein | - |
| HUF04_RS28065 () | 5882602..5883231 | + | 630 | WP_031630691.1 | transglycosylase SLT domain-containing protein | - |
| HUF04_RS28070 () | 5883433..5884044 | + | 612 | WP_031630690.1 | hypothetical protein | - |
| HUF04_RS28075 () | 5884048..5884437 | + | 390 | WP_003094234.1 | hypothetical protein | - |
| HUF04_RS28080 () | 5884427..5884735 | + | 309 | WP_003094236.1 | hypothetical protein | - |
| HUF04_RS28085 () | 5884741..5885316 | + | 576 | WP_003094238.1 | DUF3486 family protein | - |
| HUF04_RS28090 () | 5885318..5887021 | + | 1704 | WP_003139988.1 | hypothetical protein | - |
| HUF04_RS28095 () | 5887021..5888499 | + | 1479 | WP_003094242.1 | DUF935 family protein | - |
| HUF04_RS28100 () | 5888499..5889749 | + | 1251 | WP_202096781.1 | hypothetical protein | - |
| HUF04_RS28105 () | 5889746..5890318 | + | 573 | WP_202096782.1 | phage virion morphogenesis protein | - |
| HUF04_RS28110 () | 5890537..5891784 | + | 1248 | WP_023442965.1 | peptidase | - |
| HUF04_RS28115 () | 5891788..5892165 | + | 378 | WP_003152198.1 | DUF2190 family protein | - |
| HUF04_RS28120 () | 5892177..5893106 | + | 930 | WP_034066086.1 | hypothetical protein | - |
| HUF04_RS28125 () | 5893153..5893347 | + | 195 | WP_003094256.1 | hypothetical protein | - |
| HUF04_RS28130 () | 5893347..5893673 | + | 327 | WP_003094258.1 | hypothetical protein | - |
| HUF04_RS28135 () | 5893681..5894190 | + | 510 | WP_003094261.1 | DUF1320 domain-containing protein | - |
| HUF04_RS28140 () | 5894192..5894647 | + | 456 | WP_003094263.1 | hypothetical protein | - |
| HUF04_RS28145 () | 5894644..5894853 | + | 210 | WP_003139972.1 | hypothetical protein | - |
| HUF04_RS28150 () | 5894857..5895609 | + | 753 | WP_003094267.1 | hypothetical protein | - |
| HUF04_RS28155 () | 5895611..5896117 | + | 507 | WP_174818297.1 | hypothetical protein | - |
| HUF04_RS28160 () | 5896114..5896257 | + | 144 | WP_162836281.1 | hypothetical protein | - |
| HUF04_RS28165 () | 5896344..5900195 | + | 3852 | WP_202096783.1 | phage tail length tape measure family protein | - |
| HUF04_RS28170 () | 5900195..5901151 | + | 957 | WP_044266199.1 | hypothetical protein | - |
| HUF04_RS28175 () | 5901154..5902083 | + | 930 | WP_202096784.1 | hypothetical protein | - |
| HUF04_RS28180 () | 5902086..5903792 | + | 1707 | WP_044266194.1 | hypothetical protein | - |
| HUF04_RS28185 () | 5903779..5904207 | + | 429 | WP_202096785.1 | hypothetical protein | - |
| HUF04_RS28190 () | 5904092..5904598 | + | 507 | WP_202096786.1 | phage BR0599 family protein | - |
| HUF04_RS28195 () | 5904608..5904838 | + | 231 | WP_003094285.1 | hypothetical protein | - |
| HUF04_RS28200 () | 5905052..5907262 | + | 2211 | WP_033967113.1 | bacteriophage protein | - |
| HUF04_RS28205 () | 5907259..5907690 | + | 432 | Protein_5581 | DUF2793 domain-containing protein | - |
| HUF04_RS28210 () | 5908104..5908406 | + | 303 | WP_033967110.1 | hypothetical protein | - |
| HUF04_RS28215 () | 5908403..5908621 | + | 219 | WP_033967108.1 | hypothetical protein | - |
| HUF04_RS28220 () | 5908694..5908918 | + | 225 | WP_033967103.1 | hypothetical protein | - |
| HUF04_RS28225 () | 5909005..5909730 | + | 726 | Protein_5585 | ATP-binding domain-containing protein | - |
| HUF04_RS28230 () | 5909861..5910970 | + | 1110 | WP_023082058.1 | hypothetical protein | - |
| HUF04_RS28235 () | 5911015..5911326 | - | 312 | WP_003117074.1 | DUF2845 domain-containing protein | - |
| HUF04_RS28240 () | 5911489..5911951 | - | 463 | Protein_5588 | IS5 family transposase ISPpu21 | Transposase |
| HUF04_RS28245 () | 5912011..5913280 | - | 1270 | Protein_5589 | group II intron reverse transcriptase/maturase | - |
| HUF04_RS28250 () | 5913802..5914312 | - | 511 | Protein_5590 | IS5 family transposase | - |
| HUF04_RS28255 () | 5914537..5914836 | + | 300 | WP_003109393.1 | hypothetical protein | - |
| HUF04_RS28260 () | 5914929..5915267 | + | 339 | WP_020751097.1 | RAQPRD family integrative conjugative element protein | - |
| HUF04_RS28265 () | 5915264..5915503 | + | 240 | WP_023443559.1 | TIGR03758 family integrating conjugative element protein | - |
| HUF04_RS28270 () | 5915521..5915877 | + | 357 | WP_003109398.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| HUF04_RS28275 () | 5915888..5916274 | + | 387 | WP_003109399.1 | TIGR03750 family conjugal transfer protein | - |
| HUF04_RS28280 () | 5916271..5916930 | + | 660 | WP_003109400.1 | TIGR03746 family integrating conjugative element protein | - |
| HUF04_RS28285 () | 5916927..5917811 | + | 885 | WP_003109401.1 | TIGR03749 family integrating conjugative element protein | - |
| HUF04_RS28290 () | 5917795..5919300 | + | 1506 | WP_020751098.1 | TIGR03752 family integrating conjugative element protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|