MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 115733 bp
Accession: NZ_CP054572 Location: 378848..494580 Organism: Pseudomonas sp. FDAARGOS_761 Replicon: chromosome
Accession: NZ_CP054572 Location: 378848..494580 Organism: Pseudomonas sp. FDAARGOS_761 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOC67_RS01740 () | 374003..374965 | + | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| FOC67_RS01745 () | 374962..375690 | + | 729 | WP_009316270.1 | peptidoglycan editing factor PgeF | - |
| FOC67_RS01750 () | 375846..378410 | + | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| FOC67_RS01770 () | 379262..380545 | - | 1284 | WP_009316271.1 | site-specific integrase | - |
| FOC67_RS01775 () | 380542..382461 | - | 1920 | WP_009316272.1 | helicase/relaxase domain-containing protein | - |
| FOC67_RS01780 () | 382853..383314 | + | 462 | WP_083842358.1 | GNAT family N-acetyltransferase | - |
| FOC67_RS01785 () | 383483..386128 | - | 2646 | WP_009316274.1 | AAA family ATPase | - |
| FOC67_RS01790 () | 386424..387858 | - | 1435 | Protein_343 | IS1182 family transposase | - |
| FOC67_RS01795 () | 388096..388413 | + | 318 | WP_159068409.1 | hypothetical protein | - |
| FOC67_RS01800 () | 388435..389646 | + | 1212 | WP_009316278.1 | nucleoside 2-deoxyribosyltransferase | - |
| FOC67_RS01805 () | 389643..390248 | + | 606 | WP_009316279.1 | 7-cyano-7-deazaguanine synthase | - |
| FOC67_RS01810 () | 390214..390906 | + | 693 | WP_159068410.1 | nitroreductase family protein | - |
| FOC67_RS01815 () | 390841..391674 | - | 834 | WP_009316280.1 | hypothetical protein | - |
| FOC67_RS01820 () | 391674..392351 | - | 678 | WP_031627783.1 | DNA adenine methylase | - |
| FOC67_RS01825 () | 392764..393909 | + | 1146 | Protein_350 | beta-lactamase family protein | - |
| FOC67_RS01830 () | 394328..394678 | - | 351 | WP_009316284.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FOC67_RS01835 () | 394682..394954 | - | 273 | WP_003086148.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| FOC67_RS01840 () | 395073..395423 | + | 351 | WP_124136381.1 | hypothetical protein | - |
| FOC67_RS01845 () | 395460..396971 | - | 1512 | WP_009316285.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| FOC67_RS01850 () | 396968..397339 | - | 372 | WP_009316286.1 | hypothetical protein | - |
| FOC67_RS01855 () | 397339..398721 | - | 1383 | WP_003159687.1 | integrating conjugative element protein | - |
| FOC67_RS01860 () | 398739..399677 | - | 939 | WP_009316287.1 | TIGR03756 family integrating conjugative element protein | - |
| FOC67_RS01865 () | 399677..400108 | - | 432 | WP_083842360.1 | TIGR03757 family integrating conjugative element protein | - |
| FOC67_RS01870 () | 402226..402444 | + | 219 | WP_009316289.1 | hypothetical protein | - |
| FOC67_RS01875 () | 402441..403100 | - | 660 | WP_009316290.1 | DsbA family protein | - |
| FOC67_RS01880 () | 403097..403381 | - | 285 | WP_009316291.1 | hypothetical protein | - |
| FOC67_RS01885 () | 403378..406320 | - | 2943 | WP_009316292.1 | conjugative transfer ATPase | - |
| FOC67_RS01890 () | 406320..406763 | - | 444 | WP_009316293.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| FOC67_RS01895 () | 406741..408246 | - | 1506 | WP_009316294.1 | TIGR03752 family integrating conjugative element protein | - |
| FOC67_RS01900 () | 408230..409114 | - | 885 | WP_009316295.1 | TIGR03749 family integrating conjugative element protein | - |
| FOC67_RS01905 () | 409111..409770 | - | 660 | WP_003086164.1 | TIGR03746 family integrating conjugative element protein | - |
| FOC67_RS01910 () | 409767..410153 | - | 387 | WP_009316296.1 | TIGR03750 family conjugal transfer protein | - |
| FOC67_RS01915 () | 410164..410520 | - | 357 | WP_009316297.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| FOC67_RS01920 () | 410538..410777 | - | 240 | WP_003099839.1 | TIGR03758 family integrating conjugative element protein | - |
| FOC67_RS01925 () | 410774..411112 | - | 339 | WP_020750393.1 | RAQPRD family integrative conjugative element protein | - |
| FOC67_RS01930 () | 411206..411511 | - | 306 | WP_009316299.1 | hypothetical protein | - |
| FOC67_RS01935 () | 411620..413101 | - | 1482 | WP_009316300.1 | UvrD-helicase domain-containing protein | - |
| FOC67_RS01940 () | 413112..413858 | - | 747 | WP_009316301.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| FOC67_RS01945 () | 413858..416089 | - | 2232 | WP_009316302.1 | type IV conjugative transfer system coupling protein TraD | - |
| FOC67_RS01950 () | 416093..416362 | - | 270 | WP_009316303.1 | hypothetical protein | - |
| FOC67_RS01955 () | 416371..416871 | - | 501 | WP_009316304.1 | integrating conjugative element protein | - |
| FOC67_RS01960 () | 416868..417449 | - | 582 | WP_003121011.1 | hypothetical protein | - |
| FOC67_RS01965 () | 417434..418189 | - | 756 | WP_009316305.1 | TIGR03759 family integrating conjugative element protein | - |
| FOC67_RS01970 () | 418200..418892 | - | 693 | WP_009316306.1 | hypothetical protein | - |
| FOC67_RS01975 () | 419088..419318 | + | 231 | WP_031627788.1 | antitoxin | - |
| FOC67_RS01980 () | 419318..419728 | + | 411 | Protein_381 | tRNA(fMet)-specific endonuclease VapC | - |
| FOC67_RS01985 () | 419834..420941 | - | 1108 | Protein_382 | IS3 family transposase | - |
| FOC67_RS01990 () | 421512..422990 | + | 1479 | WP_009316311.1 | serralysin family metalloprotease | - |
| FOC67_RS01995 () | 423052..424191 | + | 1140 | WP_009316312.1 | M10 family metallopeptidase C-terminal domain-containing protein | - |
| FOC67_RS02000 () | 424327..425542 | + | 1216 | Protein_385 | ISL3 family transposase | - |
| FOC67_RS02005 () | 425677..427071 | - | 1395 | WP_009316315.1 | formylglycine-generating enzyme family protein | - |
| FOC67_RS02010 () | 427529..428884 | + | 1356 | WP_009316316.1 | substrate-binding domain-containing protein | - |
| FOC67_RS02015 () | 429307..431175 | + | 1869 | WP_009316317.1 | calcium-binding protein | - |
| FOC67_RS02020 () | 431313..433085 | + | 1773 | WP_174707702.1 | type I secretion system permease/ATPase | - |
| FOC67_RS02025 () | 433082..434380 | + | 1299 | WP_003082540.1 | HlyD family type I secretion periplasmic adaptor subunit | - |
| FOC67_RS02030 () | 434384..435769 | + | 1386 | WP_009316320.1 | TolC family outer membrane protein | - |
| FOC67_RS02035 () | 435785..436771 | + | 987 | WP_083842345.1 | LysR family transcriptional regulator | - |
| FOC67_RS02040 () | 437250..437795 | - | 546 | Protein_393 | helix-turn-helix domain-containing protein | - |
| FOC67_RS02045 () | 437861..438151 | + | 291 | Protein_394 | transposase | - |
| FOC67_RS02050 () | 438400..438657 | + | 258 | WP_083842347.1 | bacteriocin immunity protein | - |
| FOC67_RS02055 () | 438756..439082 | + | 327 | WP_009315810.1 | hypothetical protein | - |
| FOC67_RS02060 () | 439079..439450 | + | 372 | WP_009315811.1 | hypothetical protein | - |
| FOC67_RS02065 () | 439783..440499 | - | 717 | WP_083842348.1 | M10 family metallopeptidase C-terminal domain-containing protein | - |
| FOC67_RS02070 () | 440729..441130 | - | 402 | WP_159068402.1 | hypothetical protein | - |
| FOC67_RS02075 () | 441407..441544 | + | 138 | Protein_400 | IS5/IS1182 family transposase | - |
| FOC67_RS02080 () | 441750..442721 | - | 972 | Protein_401 | ExeA family protein | - |
| FOC67_RS02085 () | 443138..443714 | - | 577 | Protein_402 | recombinase family protein | - |
| FOC67_RS02090 () | 444042..446132 | + | 2091 | WP_009315814.1 | S-type pyocin domain-containing protein | - |
| FOC67_RS02095 () | 446132..446395 | + | 264 | WP_083842350.1 | immunity protein | - |
| FOC67_RS02100 () | 446586..447952 | - | 1367 | Protein_405 | IS3 family transposase | - |
| FOC67_RS02105 () | 448033..448383 | - | 351 | WP_003099791.1 | hypothetical protein | - |
| FOC67_RS02110 () | 448619..449257 | - | 639 | WP_009315816.1 | hypothetical protein | - |
| FOC67_RS02115 () | 449524..449721 | - | 198 | WP_009315817.1 | hypothetical protein | - |
| FOC67_RS02120 () | 449795..449953 | - | 159 | WP_009315818.1 | hypothetical protein | - |
| FOC67_RS02125 () | 450091..450570 | - | 480 | WP_009315819.1 | DUF3577 domain-containing protein | - |
| FOC67_RS02130 () | 450999..451172 | + | 174 | WP_174707703.1 | hypothetical protein | - |
| FOC67_RS02135 () | 451281..451670 | - | 390 | WP_009315820.1 | hypothetical protein | - |
| FOC67_RS02140 () | 452592..453029 | - | 438 | WP_009315821.1 | type IV pilus biogenesis protein PilM | - |
| FOC67_RS02145 () | 453058..454386 | - | 1329 | WP_009315822.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| FOC67_RS02150 () | 454391..455332 | - | 942 | WP_009315823.1 | Flp pilus assembly complex ATPase component TadA | - |
| FOC67_RS02155 () | 455329..455859 | - | 531 | WP_003099765.1 | pilus assembly protein PilX | - |
| FOC67_RS02160 () | 455881..456960 | - | 1080 | WP_003123335.1 | type II secretion system F family protein | - |
| FOC67_RS02165 () | 456960..458540 | - | 1581 | WP_009315826.1 | Flp pilus assembly complex ATPase component TadA | - |
| FOC67_RS02170 () | 458549..459079 | - | 531 | WP_009315828.1 | type IV pilus biogenesis protein PilP | - |
| FOC67_RS02175 () | 459069..460394 | - | 1326 | WP_009315829.1 | type 4b pilus protein PilO2 | - |
| FOC67_RS02180 () | 460398..462107 | - | 1710 | WP_009315831.1 | PilN family type IVB pilus formation outer membrane protein | - |
| FOC67_RS02185 () | 462107..463231 | - | 1125 | WP_009315833.1 | TcpQ domain-containing protein | - |
| FOC67_RS02190 () | 463502..463828 | + | 327 | WP_031627729.1 | colicin immunity protein | - |
| FOC67_RS02195 () | 463853..465046 | - | 1194 | WP_108913459.1 | pyocin S5 | - |
| FOC67_RS02200 () | 466214..467083 | + | 870 | WP_009315838.1 | hypothetical protein | - |
| FOC67_RS02205 () | 467069..467395 | - | 327 | WP_009315840.1 | hypothetical protein | - |
| FOC67_RS02210 () | 467505..469481 | - | 1977 | WP_009315842.1 | DEAD/DEAH box helicase | - |
| FOC67_RS02215 () | 469478..471367 | - | 1890 | WP_009315844.1 | hypothetical protein | - |
| FOC67_RS02220 () | 471689..472441 | - | 753 | WP_009315847.1 | hypothetical protein | - |
| FOC67_RS02225 () | 472449..474368 | - | 1920 | WP_031627730.1 | type I DNA topoisomerase | - |
| FOC67_RS02230 () | 474687..474917 | + | 231 | WP_023132185.1 | antitoxin | Antitoxin Detail |
| FOC67_RS02235 () | 474917..475327 | + | 411 | WP_003105740.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| FOC67_RS02240 () | 475349..475609 | + | 261 | WP_003105742.1 | hypothetical protein | - |
| FOC67_RS02245 () | 475809..476027 | + | 219 | WP_003105747.1 | hypothetical protein | - |
| FOC67_RS02250 () | 476093..476260 | - | 168 | WP_128729268.1 | CrpP family protein | - |
| FOC67_RS02255 () | 476424..476912 | - | 489 | WP_003105748.1 | single-stranded DNA-binding protein | - |
| FOC67_RS02260 () | 476942..477772 | - | 831 | WP_009315858.1 | phage regulatory protein | - |
| FOC67_RS02265 () | 477820..478365 | - | 546 | WP_009315860.1 | DUF3158 family protein | - |
| FOC67_RS02270 () | 478371..479099 | - | 729 | WP_009315862.1 | TIGR03761 family integrating conjugative element protein | - |
| FOC67_RS02275 () | 479256..479453 | - | 198 | WP_009315864.1 | hypothetical protein | - |
| FOC67_RS02280 () | 479365..479690 | - | 326 | Protein_441 | hypothetical protein | - |
| FOC67_RS02285 () | 480278..481603 | - | 1326 | WP_009315868.1 | hypothetical protein | - |
| FOC67_RS02290 () | 481600..482355 | - | 756 | WP_009315870.1 | DUF2857 domain-containing protein | - |
| FOC67_RS02295 () | 482383..484125 | - | 1743 | WP_174707704.1 | ParB family protein | - |
| FOC67_RS02300 () | 484122..484376 | - | 255 | WP_009316384.1 | Arc family DNA-binding protein | - |
| FOC67_RS02305 () | 484379..485395 | - | 1017 | WP_174707705.1 | nucleoid-associated protein YejK | - |
| FOC67_RS02310 () | 485395..485628 | - | 234 | WP_009315877.1 | hypothetical protein | - |
| FOC67_RS02315 () | 485621..486115 | - | 495 | WP_159068403.1 | hypothetical protein | - |
| FOC67_RS02320 () | 486108..486365 | - | 258 | WP_009315881.1 | hypothetical protein | - |
| FOC67_RS02325 () | 486362..486889 | - | 528 | WP_009315883.1 | hypothetical protein | - |
| FOC67_RS02330 () | 486879..487064 | - | 186 | WP_009315885.1 | hypothetical protein | - |
| FOC67_RS02335 () | 487242..487688 | + | 447 | WP_031627734.1 | hypothetical protein | - |
| FOC67_RS02340 () | 488127..489470 | - | 1344 | WP_009315887.1 | replicative DNA helicase | - |
| FOC67_RS02345 () | 489467..489691 | - | 225 | WP_009315888.1 | hypothetical protein | - |
| FOC67_RS02350 () | 489675..490154 | - | 480 | WP_009315889.1 | HNH endonuclease | - |
| FOC67_RS02355 () | 490151..490852 | - | 702 | WP_009315890.1 | DUF2786 domain-containing protein | - |
| FOC67_RS02360 () | 490852..491538 | - | 687 | WP_003122071.1 | hypothetical protein | - |
| FOC67_RS02365 () | 491535..492356 | - | 822 | WP_174707760.1 | hypothetical protein | - |
| FOC67_RS02370 () | 492362..492859 | - | 498 | WP_009315892.1 | hypothetical protein | - |
| FOC67_RS02375 () | 492856..493581 | - | 726 | WP_009315893.1 | hypothetical protein | - |
| FOC67_RS02380 () | 493583..494443 | - | 861 | WP_003158180.1 | ParA family protein | - |
| FOC67_RS02385 () | 494811..499010 | - | 4200 | WP_009315894.1 | two-partner secretion system exoprotein TpsA4 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|