MGE detailed information
MGE type: Prophage MGE length: 56288 bp
Accession: NZ_CP054556 Location: 920572..976859 Organism: Escherichia coli strain LWY24 Replicon: chromosome
Accession: NZ_CP054556 Location: 920572..976859 Organism: Escherichia coli strain LWY24 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HT750_RS04465 () | 915830..917878 | - | 2049 | WP_001055782.1 | carboxy terminal-processing peptidase | - |
| HT750_RS04470 () | 917898..918596 | - | 699 | WP_022645796.1 | RNA chaperone ProQ | - |
| HT750_RS04475 () | 918693..919190 | - | 498 | WP_024181821.1 | L-methionine (R)-S-oxide reductase | - |
| HT750_RS04480 () | 919320..920603 | + | 1284 | WP_001361420.1 | membrane integrity lipid transport subunit YebS | - |
| HT750_RS04485 () | 920572..923205 | + | 2634 | WP_061092668.1 | hypothetical protein | VF |
| HT750_RS04490 () | 923285..924724 | + | 1440 | WP_024179479.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HT750_RS04495 () | 924842..925078 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| HT750_RS04500 () | 925183..925374 | + | 192 | WP_001296140.1 | YebW family protein | - |
| HT750_RS04505 () | 925375..926031 | - | 657 | WP_000812752.1 | protein-serine/threonine phosphatase | - |
| HT750_RS04510 () | 926496..927050 | - | 555 | WP_001386857.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| HT750_RS04515 () | 927080..927583 | + | 504 | WP_016236828.1 | phage tail protein | - |
| HT750_RS04520 () | 927583..928176 | + | 594 | WP_000805555.1 | tail fiber assembly protein | - |
| HT750_RS04525 () | 928148..928588 | - | 441 | WP_001174916.1 | tail fiber assembly protein | - |
| HT750_RS04530 () | 928591..929286 | - | 696 | WP_174617229.1 | hypothetical protein | - |
| HT750_RS04535 () | 929286..929966 | - | 681 | WP_000049950.1 | DUF2612 domain-containing protein | - |
| HT750_RS04540 () | 929963..931162 | - | 1200 | WP_097340187.1 | baseplate J/gp47 family protein | - |
| HT750_RS04545 () | 931162..931515 | - | 354 | WP_001270634.1 | hypothetical protein | - |
| HT750_RS04550 () | 931515..932267 | - | 753 | WP_097444094.1 | translation initiation factor IF-2 | - |
| HT750_RS04555 () | 932327..932566 | - | 240 | WP_000466689.1 | DUF4282 domain-containing protein | - |
| HT750_RS04560 () | 932706..933041 | - | 336 | WP_000755137.1 | hypothetical protein | - |
| HT750_RS04565 () | 933038..934072 | - | 1035 | WP_000042293.1 | hypothetical protein | - |
| HT750_RS04570 () | 934075..934377 | - | 303 | WP_000648663.1 | hypothetical protein | - |
| HT750_RS04575 () | 934381..935031 | - | 651 | WP_089553543.1 | hypothetical protein | - |
| HT750_RS04580 () | 935031..937037 | - | 2007 | WP_174617230.1 | lytic transglycosylase catalytic | - |
| HT750_RS04585 () | 937215..937667 | - | 453 | WP_023565715.1 | hypothetical protein | - |
| HT750_RS04590 () | 937671..938111 | - | 441 | WP_000109249.1 | DUF3277 family protein | - |
| HT750_RS04595 () | 938122..939267 | - | 1146 | WP_032330418.1 | DUF3383 family protein | - |
| HT750_RS04600 () | 939271..939834 | - | 564 | WP_033544654.1 | hypothetical protein | - |
| HT750_RS04605 () | 939809..940198 | - | 390 | WP_023908474.1 | hypothetical protein | - |
| HT750_RS04610 () | 940185..940739 | - | 555 | WP_174617231.1 | hypothetical protein | - |
| HT750_RS04615 () | 940736..941143 | - | 408 | WP_072651311.1 | DUF4054 domain-containing protein | - |
| HT750_RS04620 () | 941142..941375 | + | 234 | WP_174617286.1 | hypothetical protein | - |
| HT750_RS04625 () | 941372..942313 | - | 942 | WP_174617232.1 | DUF2184 domain-containing protein | - |
| HT750_RS04630 () | 942325..942831 | - | 507 | WP_072645186.1 | hypothetical protein | - |
| HT750_RS04635 () | 942835..944055 | - | 1221 | WP_174617233.1 | DUF2213 domain-containing protein | - |
| HT750_RS04640 () | 944070..944807 | - | 738 | WP_086353604.1 | minor capsid protein | - |
| HT750_RS04645 () | 944695..946161 | - | 1467 | WP_174617234.1 | DUF1073 domain-containing protein | - |
| HT750_RS04650 () | 946161..947783 | - | 1623 | WP_113421761.1 | TerL protein | - |
| HT750_RS04655 () | 947786..948337 | - | 552 | WP_001218996.1 | terminase small subunit | - |
| HT750_RS04660 () | 948291..948905 | + | 615 | WP_001472362.1 | hypothetical protein | - |
| HT750_RS04665 () | 949038..949223 | - | 186 | WP_000113283.1 | hypothetical protein | - |
| HT750_RS04670 () | 949367..949759 | - | 393 | WP_062898035.1 | DUF2570 domain-containing protein | - |
| HT750_RS04675 () | 949743..950219 | - | 477 | WP_001194120.1 | glycoside hydrolase family protein | - |
| HT750_RS04680 () | 950223..950564 | - | 342 | WP_174617235.1 | phage holin, lambda family | - |
| HT750_RS04685 () | 950728..950943 | + | 216 | WP_071779784.1 | hypothetical protein | - |
| HT750_RS04690 () | 950912..951481 | - | 570 | WP_174617236.1 | hypothetical protein | - |
| HT750_RS04695 () | 951715..952326 | - | 612 | WP_044782015.1 | ORF6N domain-containing protein | - |
| HT750_RS04700 () | 952597..953151 | - | 555 | WP_000640150.1 | DUF1133 family protein | - |
| HT750_RS04705 () | 953148..953438 | - | 291 | WP_000228038.1 | DUF1364 domain-containing protein | - |
| HT750_RS04710 () | 953438..954037 | - | 600 | WP_174617237.1 | DUF1367 family protein | - |
| HT750_RS04715 () | 954597..954809 | - | 213 | WP_097340190.1 | type I toxin-antitoxin system Hok family toxin | - |
| HT750_RS04720 () | 955150..955668 | - | 519 | WP_000013905.1 | hypothetical protein | - |
| HT750_RS04725 () | 955661..955975 | - | 315 | WP_000691548.1 | STAS-like domain-containing protein | - |
| HT750_RS04730 () | 955977..957143 | - | 1167 | WP_000622266.1 | hypothetical protein | - |
| HT750_RS04735 () | 957380..957841 | - | 462 | WP_001151128.1 | DUF977 family protein | - |
| HT750_RS04740 () | 957857..958618 | - | 762 | WP_001767393.1 | DUF1627 domain-containing protein | - |
| HT750_RS04745 () | 958641..959387 | - | 747 | WP_000788993.1 | ATP-binding protein | - |
| HT750_RS04750 () | 959394..960182 | - | 789 | WP_001434152.1 | hypothetical protein | - |
| HT750_RS04755 () | 960260..960682 | - | 423 | WP_000702025.1 | hypothetical protein | - |
| HT750_RS04760 () | 960679..960924 | - | 246 | WP_001033915.1 | helix-turn-helix domain-containing protein | - |
| HT750_RS04765 () | 961021..961440 | + | 420 | WP_000410105.1 | helix-turn-helix domain-containing protein | - |
| HT750_RS04770 () | 961747..961899 | + | 153 | WP_000379566.1 | DUF1391 family protein | - |
| HT750_RS04775 () | 962185..962406 | + | 222 | WP_000560218.1 | killing protein KilR | - |
| HT750_RS04780 () | 962400..962576 | + | 177 | WP_000245528.1 | hypothetical protein | - |
| HT750_RS04785 () | 962651..962925 | + | 275 | Protein_947 | hypothetical protein | - |
| HT750_RS04790 () | 963026..966154 | + | 3129 | WP_074465218.1 | exodeoxyribonuclease VIII | - |
| HT750_RS04795 () | 966166..967218 | + | 1053 | WP_174617238.1 | recombinase RecT | - |
| HT750_RS04800 () | 967282..967476 | + | 195 | WP_010989194.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| HT750_RS04805 () | 967469..967657 | + | 189 | WP_024165285.1 | DUF1187 family protein | - |
| - () | 967475..967653 | - | 179 | NuclAT_0 | - | - |
| - () | 967475..967653 | - | 179 | NuclAT_0 | - | - |
| - () | 967475..967653 | - | 179 | NuclAT_0 | - | - |
| - () | 967475..967653 | - | 179 | NuclAT_0 | - | - |
| HT750_RS04810 () | 967764..968045 | + | 282 | WP_001311878.1 | excisionase | - |
| HT750_RS04815 () | 968011..969087 | + | 1077 | WP_001189087.1 | hypothetical protein ; Integrase | Integrase |
| - () | 969218..969452 | + | 235 | - | - | Antitoxin Detail |
| - () | 969219..969321 | - | 103 | - | - | Toxin Detail |
| HT750_RS04820 () | 969480..969821 | - | 342 | WP_000976484.1 | YebY family protein | - |
| HT750_RS04825 () | 969834..970706 | - | 873 | WP_000879323.1 | copper homeostasis membrane protein CopD | - |
| HT750_RS04830 () | 970710..971084 | - | 375 | WP_000168737.1 | CopC domain-containing protein YobA | - |
| HT750_RS04835 () | 971223..971453 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| HT750_RS04840 () | 971555..972211 | + | 657 | WP_000011651.1 | carbon-nitrogen hydrolase family protein | - |
| HT750_RS04845 () | 972235..972897 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| HT750_RS04850 () | 972894..974954 | - | 2061 | WP_000936976.1 | oligopeptidase B | - |
| HT750_RS04855 () | 975161..975820 | - | 660 | WP_000024761.1 | tellurite resistance TerB family protein | - |
| HT750_RS04860 () | 976146..976502 | - | 357 | WP_001295500.1 | protein YebF | - |
| HT750_RS04865 () | 976569..976859 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| HT750_RS04870 () | 976993..978171 | + | 1179 | WP_000173454.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HT750_RS04875 () | 978227..978868 | - | 642 | WP_000800513.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HT750_RS04880 () | 978905..980716 | - | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|