MGE detailed information
MGE type: Prophage MGE length: 49661 bp
Accession: NZ_CP054472 Location: 2672405..2722065 Organism: Pseudomonas aeruginosa strain PAAK088 Replicon: chromosome
Accession: NZ_CP054472 Location: 2672405..2722065 Organism: Pseudomonas aeruginosa strain PAAK088 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MS088_RS12580 () | 2667668..2669275 | + | 1608 | WP_023115297.1 | methyl-accepting chemotaxis protein | - |
| MS088_RS12585 () | 2669286..2670629 | - | 1344 | WP_034061835.1 | response regulator | - |
| MS088_RS12590 () | 2670707..2672119 | + | 1413 | WP_003120048.1 | two-component sensor histidine kinase | - |
| MS088_RS12600 () | 2672405..2673433 | - | 1029 | WP_016562002.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| MS088_RS12605 () | 2673434..2673646 | - | 213 | WP_016562001.1 | DUF4224 domain-containing protein | - |
| MS088_RS12610 () | 2673940..2674245 | - | 306 | Protein_2487 | hypothetical protein | - |
| MS088_RS12615 () | 2674571..2675022 | - | 452 | Protein_2488 | DUF4406 domain-containing protein | - |
| MS088_RS12620 () | 2675053..2675793 | + | 741 | WP_121500375.1 | hypothetical protein | - |
| MS088_RS12625 () | 2675850..2676119 | + | 270 | WP_034058646.1 | hypothetical protein | - |
| MS088_RS12630 () | 2676116..2678194 | - | 2079 | WP_034066690.1 | DNA cytosine methyltransferase | - |
| MS088_RS12635 () | 2678311..2678604 | + | 294 | WP_052151598.1 | hypothetical protein | - |
| MS088_RS12640 () | 2678718..2679515 | - | 798 | WP_034066689.1 | hypothetical protein | - |
| MS088_RS12645 () | 2679631..2679957 | + | 327 | WP_124171382.1 | hypothetical protein | - |
| MS088_RS12650 () | 2680125..2681870 | - | 1746 | WP_034061655.1 | AAA family ATPase | - |
| MS088_RS12655 () | 2681874..2682854 | - | 981 | WP_034061658.1 | cell division protein FtsK | - |
| MS088_RS12660 () | 2682867..2683067 | - | 201 | WP_009314053.1 | hypothetical protein | - |
| MS088_RS12665 () | 2683074..2683973 | - | 900 | WP_014602814.1 | recombination protein RecT | - |
| MS088_RS12670 () | 2683986..2684894 | - | 909 | WP_034061661.1 | YqaJ viral recombinase family protein | - |
| MS088_RS12675 () | 2684961..2685245 | + | 285 | WP_023113718.1 | hypothetical protein | - |
| MS088_RS12680 () | 2685232..2685372 | - | 141 | WP_023113719.1 | hypothetical protein | - |
| MS088_RS12685 () | 2685369..2685608 | - | 240 | WP_029528657.1 | hypothetical protein | - |
| MS088_RS12690 () | 2685601..2685783 | - | 183 | WP_014602817.1 | hypothetical protein | - |
| MS088_RS12695 () | 2685780..2686001 | - | 222 | WP_003099037.1 | hypothetical protein | - |
| MS088_RS12700 () | 2685985..2686131 | - | 147 | WP_009314058.1 | hypothetical protein | - |
| MS088_RS12705 () | 2686708..2687078 | - | 371 | Protein_2506 | carbon storage regulator CsrA | - |
| MS088_RS12710 () | 2687114..2687326 | - | 213 | WP_009314060.1 | hypothetical protein | - |
| MS088_RS12715 () | 2687426..2687737 | + | 312 | WP_124074828.1 | hypothetical protein | - |
| MS088_RS12720 () | 2688441..2688752 | + | 312 | WP_033982144.1 | DUF1654 domain-containing protein | - |
| MS088_RS12725 () | 2689137..2689742 | + | 606 | WP_071542656.1 | sce7726 family protein | - |
| MS088_RS12730 () | 2689690..2690808 | - | 1119 | WP_079382220.1 | beta family protein | - |
| MS088_RS12735 () | 2690798..2691364 | - | 567 | WP_015648953.1 | ImmA/IrrE family metallo-endopeptidase | - |
| MS088_RS12740 () | 2691369..2691980 | - | 612 | WP_065424967.1 | hypothetical protein | - |
| MS088_RS12745 () | 2692016..2692849 | - | 834 | WP_015648951.1 | Cro/CI family transcriptional regulator | - |
| MS088_RS12750 () | 2692939..2693118 | + | 180 | WP_015648950.1 | Cro/Cl family transcriptional regulator | - |
| MS088_RS12755 () | 2693151..2693534 | + | 384 | WP_015648949.1 | hypothetical protein | - |
| MS088_RS12760 () | 2693702..2694274 | + | 573 | WP_023096627.1 | hypothetical protein | - |
| MS088_RS12765 () | 2694277..2695287 | + | 1011 | WP_034061664.1 | hypothetical protein | - |
| MS088_RS12770 () | 2695415..2695828 | + | 414 | WP_034061691.1 | hypothetical protein | - |
| MS088_RS12775 () | 2695821..2696264 | + | 444 | WP_019396730.1 | RusA family crossover junction endodeoxyribonuclease | - |
| MS088_RS12780 () | 2696293..2697162 | + | 870 | WP_034061667.1 | hypothetical protein | - |
| MS088_RS12785 () | 2697253..2697828 | - | 576 | WP_021263386.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| MS088_RS12790 () | 2697869..2698048 | - | 180 | WP_019486655.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| MS088_RS12795 () | 2698508..2698843 | + | 336 | WP_003119044.1 | phage holin, lambda family | - |
| MS088_RS12800 () | 2698840..2699457 | + | 618 | WP_034058608.1 | glycoside hydrolase family 19 protein | - |
| MS088_RS12805 () | 2699475..2699906 | + | 432 | WP_170958635.1 | hypothetical protein | - |
| MS088_RS12810 () | 2700003..2700740 | + | 738 | WP_034061674.1 | hypothetical protein | - |
| MS088_RS12815 () | 2700955..2701500 | + | 546 | WP_031627904.1 | terminase small subunit | - |
| MS088_RS12820 () | 2701472..2703400 | + | 1929 | WP_014602834.1 | phage terminase large subunit family protein | - |
| MS088_RS12825 () | 2703416..2703640 | + | 225 | WP_034061677.1 | hypothetical protein | - |
| MS088_RS12830 () | 2703640..2705115 | + | 1476 | WP_023111700.1 | phage portal protein | - |
| MS088_RS12835 () | 2705112..2706308 | + | 1197 | WP_023111701.1 | Clp protease ClpP | - |
| MS088_RS12840 () | 2706308..2706667 | + | 360 | WP_079382219.1 | head decoration protein | - |
| MS088_RS12845 () | 2706734..2707729 | + | 996 | WP_014602838.1 | major capsid protein | - |
| MS088_RS12850 () | 2707729..2708040 | + | 312 | WP_170958636.1 | hypothetical protein | - |
| MS088_RS12855 () | 2708037..2708474 | + | 438 | WP_015648938.1 | hypothetical protein | - |
| MS088_RS12860 () | 2708525..2708725 | + | 201 | WP_033979349.1 | hypothetical protein | - |
| MS088_RS12865 () | 2708753..2709499 | + | 747 | WP_004353040.1 | hypothetical protein | - |
| MS088_RS12870 () | 2709732..2710172 | + | 441 | WP_014602839.1 | RICIN domain-containing protein | - |
| MS088_RS12875 () | 2710401..2713661 | + | 3261 | WP_031641981.1 | tape measure protein | - |
| MS088_RS12880 () | 2713658..2714068 | + | 411 | WP_019396973.1 | hypothetical protein | - |
| MS088_RS12885 () | 2714117..2717899 | + | 3783 | WP_174538199.1 | hypothetical protein | - |
| MS088_RS12890 () | 2717817..2718674 | + | 858 | WP_174538200.1 | hypothetical protein | - |
| MS088_RS12895 () | 2718659..2719531 | + | 873 | WP_031672354.1 | hypothetical protein | - |
| MS088_RS12900 () | 2719528..2721289 | + | 1762 | Protein_2545 | hypothetical protein | - |
| MS088_RS12905 () | 2721289..2721525 | + | 237 | WP_174538201.1 | hypothetical protein | - |
| MS088_RS12910 () | 2721856..2722065 | - | 210 | WP_014602845.1 | cold-shock protein | - |
| MS088_RS12915 () | 2722893..2723261 | + | 369 | WP_003102492.1 | PA-I galactophilic lectin | - |
| MS088_RS12920 () | 2723537..2723878 | + | 342 | WP_003120049.1 | hypothetical protein | - |
| MS088_RS12925 () | 2723997..2724404 | + | 408 | WP_003102495.1 | hypothetical protein | - |
| MS088_RS12930 () | 2724463..2726226 | - | 1764 | WP_174538202.1 | sensor domain-containing phosphodiesterase | - |
| MS088_RS12935 () | 2726483..2726692 | + | 210 | WP_003090037.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|