MGE detailed information
MGE type: Prophage MGE length: 44299 bp
Accession: NZ_CP054440 Location: 1695579..1739877 Organism: Staphylococcus saprophyticus strain UTI-058y Replicon: chromosome
Accession: NZ_CP054440 Location: 1695579..1739877 Organism: Staphylococcus saprophyticus strain UTI-058y Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HSZ52_RS08285 () | 1690964..1691466 | - | 503 | Protein_1600 | AAA family ATPase | - |
| HSZ52_RS08290 () | 1691847..1692469 | + | 623 | Protein_1601 | LysE family translocator | - |
| HSZ52_RS08295 () | 1693029..1695386 | - | 2358 | WP_103314661.1 | cadmium-translocating P-type ATPase | - |
| HSZ52_RS08300 () | 1695579..1695893 | - | 315 | WP_011303341.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| HSZ52_RS08305 () | 1696034..1696942 | - | 909 | WP_011303342.1 | IS3 family transposase ISEnfa5 | Transposase |
| HSZ52_RS08310 () | 1696903..1697586 | - | 684 | WP_011303343.1 | IS3 family transposase ISSth1b | Transposase |
| HSZ52_RS08315 () | 1697670..1697747 | - | 78 | WP_115340783.1 | hypothetical protein | - |
| HSZ52_RS08320 () | 1698822..1699232 | - | 411 | WP_011303346.1 | YolD-like family protein | - |
| HSZ52_RS08325 () | 1699242..1699433 | - | 192 | WP_011303347.1 | hypothetical protein | - |
| HSZ52_RS08330 () | 1699529..1699777 | - | 249 | WP_061050614.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| HSZ52_RS08335 () | 1700370..1700879 | - | 510 | WP_061050616.1 | DUF4065 domain-containing protein | - |
| HSZ52_RS08340 () | 1701260..1702207 | - | 948 | WP_061050681.1 | peptidoglycan recognition protein family protein | - |
| HSZ52_RS08345 () | 1702635..1702892 | - | 258 | WP_041080397.1 | phage holin | Toxin Detail |
| - () | 1702944..1703112 | + | 169 | - | - | Antitoxin Detail |
| HSZ52_RS08355 () | 1703293..1703580 | - | 288 | WP_041080395.1 | hypothetical protein | - |
| HSZ52_RS08360 () | 1703615..1705498 | - | 1884 | WP_061050617.1 | Bifunctional autolysin | VF |
| HSZ52_RS08365 () | 1705552..1705884 | - | 333 | WP_061050618.1 | DUF2977 domain-containing protein | - |
| HSZ52_RS08370 () | 1705884..1707749 | - | 1866 | WP_061050619.1 | phage baseplate upper protein | - |
| HSZ52_RS08375 () | 1707749..1709656 | - | 1908 | WP_081095023.1 | hypothetical protein | - |
| HSZ52_RS08380 () | 1709671..1711527 | - | 1857 | WP_061050620.1 | phage tail protein | - |
| HSZ52_RS08385 () | 1711538..1712464 | - | 927 | WP_061050621.1 | phage tail family protein | - |
| HSZ52_RS08390 () | 1712476..1715565 | - | 3090 | WP_061050622.1 | hypothetical protein | - |
| HSZ52_RS08395 () | 1715568..1715876 | - | 309 | WP_061050623.1 | hypothetical protein | - |
| HSZ52_RS08400 () | 1715939..1716433 | - | 495 | WP_061050624.1 | hypothetical protein | - |
| HSZ52_RS08405 () | 1716486..1717031 | - | 546 | WP_061050625.1 | hypothetical protein | - |
| HSZ52_RS08410 () | 1717037..1717459 | - | 423 | WP_061050626.1 | DUF3168 domain-containing protein | - |
| HSZ52_RS08415 () | 1717471..1717884 | - | 414 | WP_061050627.1 | HK97 gp10 family phage protein | - |
| HSZ52_RS08420 () | 1717871..1718206 | - | 336 | WP_061050628.1 | hypothetical protein | - |
| HSZ52_RS08425 () | 1718208..1718504 | - | 297 | WP_061050629.1 | phage head-tail adapter protein | - |
| HSZ52_RS08430 () | 1718504..1718797 | - | 294 | WP_061050630.1 | Rho termination factor N-terminal domain-containing protein | - |
| HSZ52_RS08435 () | 1718811..1719743 | - | 933 | WP_061050631.1 | hypothetical protein | - |
| HSZ52_RS08440 () | 1719756..1720280 | - | 525 | WP_061050632.1 | phage scaffolding protein | - |
| HSZ52_RS08445 () | 1720400..1720564 | - | 165 | WP_160279508.1 | hypothetical protein | - |
| HSZ52_RS08450 () | 1720631..1720777 | - | 147 | WP_157822572.1 | hypothetical protein | - |
| HSZ52_RS08455 () | 1720774..1722366 | - | 1593 | WP_081095024.1 | hypothetical protein | - |
| HSZ52_RS08460 () | 1722326..1723738 | - | 1413 | WP_061050633.1 | phage portal protein | - |
| HSZ52_RS08465 () | 1723751..1724959 | - | 1209 | WP_061050634.1 | PBSX family phage terminase large subunit | - |
| HSZ52_RS08470 () | 1724952..1725473 | - | 522 | WP_061050635.1 | terminase small subunit | - |
| HSZ52_RS08475 () | 1725539..1725871 | - | 333 | WP_061050636.1 | hypothetical protein | - |
| HSZ52_RS08480 () | 1726133..1726555 | - | 423 | WP_061050637.1 | transcriptional regulator | - |
| HSZ52_RS08485 () | 1726570..1726713 | - | 144 | WP_164972273.1 | hypothetical protein | - |
| HSZ52_RS08490 () | 1726898..1727368 | + | 471 | WP_061050638.1 | hypothetical protein | - |
| HSZ52_RS08495 () | 1727384..1727737 | - | 354 | WP_061050639.1 | hypothetical protein | - |
| HSZ52_RS08500 () | 1727737..1727922 | - | 186 | WP_061050640.1 | hypothetical protein | - |
| HSZ52_RS08505 () | 1727935..1728141 | - | 207 | WP_061050641.1 | hypothetical protein | - |
| HSZ52_RS08510 () | 1728119..1728319 | - | 201 | WP_061050642.1 | hypothetical protein | - |
| HSZ52_RS08515 () | 1728316..1729119 | - | 804 | WP_081095027.1 | IS21 family transposase ISRme9 | Transposase |
| HSZ52_RS08520 () | 1729217..1730068 | - | 852 | WP_061050644.1 | DnaD domain protein | - |
| HSZ52_RS08525 () | 1730110..1730925 | - | 816 | WP_061050645.1 | recombinase RecT | - |
| HSZ52_RS08530 () | 1730937..1731848 | - | 912 | WP_061050682.1 | YqaJ viral recombinase family protein | - |
| HSZ52_RS08535 () | 1731893..1732192 | - | 300 | WP_061050646.1 | hypothetical protein | - |
| HSZ52_RS08540 () | 1732267..1732446 | - | 180 | WP_061050647.1 | hypothetical protein | - |
| HSZ52_RS08545 () | 1732452..1732757 | - | 306 | WP_061050648.1 | DUF771 domain-containing protein | - |
| HSZ52_RS08550 () | 1732958..1733497 | + | 540 | WP_061050649.1 | hypothetical protein | - |
| HSZ52_RS08555 () | 1733797..1733976 | + | 180 | WP_061050650.1 | hypothetical protein | - |
| HSZ52_RS08560 () | 1734326..1734556 | - | 231 | Protein_1655 | helix-turn-helix transcriptional regulator | - |
| HSZ52_RS08565 () | 1734688..1735444 | + | 757 | Protein_1656 | helix-turn-helix domain-containing protein | - |
| HSZ52_RS08570 () | 1735539..1736882 | + | 1344 | WP_061050652.1 | SAP domain-containing protein | - |
| HSZ52_RS08575 () | 1737198..1737719 | - | 522 | WP_174543127.1 | hypothetical protein | - |
| HSZ52_RS08580 () | 1737830..1738873 | + | 1044 | WP_174543129.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| HSZ52_RS08590 () | 1739368..1739877 | - | 510 | WP_061050655.1 | metallophosphoesterase | - |
| HSZ52_RS08595 () | 1739874..1740458 | - | 585 | WP_011303379.1 | XTP/dITP diphosphatase | - |
| HSZ52_RS08600 () | 1740461..1741270 | - | 810 | WP_047503109.1 | glutamate racemase | - |
| HSZ52_RS08605 () | 1741480..1742301 | - | 822 | WP_002483630.1 | succinate dehydrogenase iron-sulfur subunit | - |
| HSZ52_RS08610 () | 1742304..1744067 | - | 1764 | WP_002483631.1 | succinate dehydrogenase flavoprotein subunit | - |
| HSZ52_RS08615 () | 1744112..1744723 | - | 612 | WP_011303381.1 | succinate dehydrogenase cytochrome b558 subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|