MGE detailed information
MGE type: Genomic_island MGE length: 45673 bp
Accession: NZ_CP054407 Location: 4432733..4478405 Organism: Escherichia coli strain KCJ3K291 Replicon: chromosome
Accession: NZ_CP054407 Location: 4432733..4478405 Organism: Escherichia coli strain KCJ3K291 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FR957_RS21815 (4429150) | 4429150..4430421 | - | 1272 | WP_253207527.1 | tyrosine-type recombinase/integrase | - |
| FR957_RS21820 (4430979) | 4430979..4431332 | + | 354 | WP_023293476.1 | hypothetical protein | - |
| FR957_RS21825 (4431325) | 4431325..4431756 | + | 432 | WP_050491688.1 | hypothetical protein | - |
| FR957_RS21830 (4431803) | 4431803..4432231 | + | 429 | WP_000098181.1 | DUF2787 family protein | - |
| FR957_RS21835 (4432290) | 4432290..4432754 | + | 465 | WP_000286078.1 | lecithin retinol acyltransferase family protein | - |
| FR957_RS21845 (4433047) | 4433047..4433433 | + | 387 | WP_223349776.1 | hypothetical protein | - |
| FR957_RS21850 (4433577) | 4433577..4434326 | + | 750 | WP_029403631.1 | DUF3944 domain-containing protein | - |
| FR957_RS21855 (4434429) | 4434429..4435142 | + | 714 | WP_023205801.1 | DeoR family transcriptional regulator | - |
| FR957_RS21860 (4435201) | 4435201..4435512 | + | 312 | WP_023337782.1 | hypothetical protein | - |
| FR957_RS21865 (4435583) | 4435583..4437451 | + | 1869 | WP_249819772.1 | DUF262 domain-containing protein | - |
| FR957_RS21870 (4437654) | 4437654..4439210 | + | 1557 | WP_097759417.1 | type I restriction-modification system subunit M | - |
| FR957_RS21875 (4439207) | 4439207..4440463 | + | 1257 | WP_146938961.1 | restriction endonuclease subunit S | - |
| FR957_RS21880 (4440580) | 4440580..4443696 | + | 3117 | WP_146938959.1 | HsdR family type I site-specific deoxyribonuclease | - |
| FR957_RS21885 (4443721) | 4443721..4444887 | + | 1167 | WP_042111438.1 | hypothetical protein | - |
| FR957_RS21890 (4445734) | 4445734..4447272 | + | 1539 | WP_001187170.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| FR957_RS21895 (4447638) | 4447638..4448972 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| FR957_RS21900 (4449052) | 4449052..4451199 | + | 2148 | WP_001100642.1 | lysine decarboxylase CadA | - |
| FR957_RS21905 (4451258) | 4451258..4452715 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| FR957_RS21910 (4452952) | 4452952..4454469 | + | 1518 | WP_001295087.1 | lysine--tRNA ligase | - |
| FR957_RS21915 (4454588) | 4454588..4454761 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| FR957_RS21920 (4454789) | 4454789..4455085 | - | 297 | WP_071988580.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| FR957_RS21925 (4455312) | 4455312..4455584 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| FR957_RS21930 (4455797) | 4455797..4459726 | - | 3930 | WP_046201569.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| FR957_RS21935 (4460887) | 4460887..4461717 | - | 831 | WP_001088100.1 | AraC family transcriptional regulator | - |
| FR957_RS21940 (4462624) | 4462624..4466460 | - | 3837 | WP_001033999.1 | S6 family peptidase | - |
| FR957_RS21945 (4466810) | 4466810..4467343 | + | 534 | WP_000733565.1 | fimbrial protein | - |
| FR957_RS21950 (4467412) | 4467412..4469769 | + | 2358 | WP_000695774.1 | PefC/AfrB family outer membrane usher protein | - |
| FR957_RS21955 (4469762) | 4469762..4470463 | + | 702 | WP_000162908.1 | fimbrial chaperone | - |
| FR957_RS21960 (4470483) | 4470483..4471478 | + | 996 | WP_001395679.1 | hypothetical protein | - |
| FR957_RS21965 (4471570) | 4471570..4472013 | + | 444 | WP_000996600.1 | fimbrial protein | - |
| FR957_RS21970 (4472006) | 4472006..4472524 | + | 519 | WP_000565927.1 | hypothetical protein | - |
| FR957_RS25250 (4472604) | 4472604..4473332 | + | 729 | Protein_4314 | helix-turn-helix domain-containing protein | - |
| FR957_RS21985 (4473462) | 4473462..4475525 | - | 2064 | WP_230986327.1 | peptidase domain-containing ABC transporter | - |
| FR957_RS21990 (4475617) | 4475617..4476837 | - | 1221 | WP_001150579.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| FR957_RS21995 (4476876) | 4476876..4477448 | - | 573 | WP_000661408.1 | hypothetical protein | - |
| FR957_RS22000 (4477851) | 4477851..4478602 | + | 752 | Protein_4318 | IS3 family transposase | - |
| FR957_RS22005 (4478731) | 4478731..4480362 | + | 1632 | WP_001216489.1 | sensor histidine kinase | - |
| FR957_RS22010 (4480359) | 4480359..4481078 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| FR957_RS22015 (4481649) | 4481649..4482989 | + | 1341 | WP_000899522.1 | anaerobic C4-dicarboxylate transporter DcuB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|