MGE detailed information
MGE type: Genomic_island MGE length: 43361 bp
Accession: NZ_CP054407 Location: 3888478..3931838 Organism: Escherichia coli strain KCJ3K291 Replicon: chromosome
Accession: NZ_CP054407 Location: 3888478..3931838 Organism: Escherichia coli strain KCJ3K291 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FR957_RS19225 (3883840) | 3883840..3884112 | + | 273 | WP_024176894.1 | flagellar biosynthetic protein FliQ | - |
| FR957_RS19230 (3884114) | 3884114..3884896 | + | 783 | WP_001260507.1 | flagellar biosynthetic protein FliR | - |
| FR957_RS19235 (3884886) | 3884886..3886025 | + | 1140 | WP_000785662.1 | flagellar type III secretion system protein FlhB | - |
| FR957_RS19240 (3886009) | 3886009..3888102 | + | 2094 | WP_001140827.1 | flagellar biosynthesis protein FlhA | - |
| FR957_RS19245 (3888207) | 3888207..3888485 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| FR957_RS19250 (3888478) | 3888478..3888834 | + | 357 | WP_001030483.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| FR957_RS19255 (3888891) | 3888891..3889664 | - | 774 | WP_000543895.1 | C40 family peptidase | - |
| FR957_RS19260 (3889850) | 3889850..3890110 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| FR957_RS19265 (3890113) | 3890113..3890391 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| FR957_RS19270 (3890547) | 3890547..3891287 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| FR957_RS19275 (3891258) | 3891258..3892025 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| FR957_RS19280 (3892231) | 3892231..3892809 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
| FR957_RS19285 (3893049) | 3893049..3895493 | + | 2445 | WP_000973081.1 | acyl-CoA dehydrogenase FadE | - |
| FR957_RS19290 (3895536) | 3895536..3895982 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| FR957_RS19295 (3896163) | 3896163..3896933 | + | 771 | WP_001118030.1 | 2-oxoglutaramate amidase | - |
| FR957_RS19305 (3897241) | 3897241..3897972 | - | 732 | WP_001366128.1 | DNA polymerase III subunit epsilon | - |
| FR957_RS19310 (3898037) | 3898037..3898504 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| FR957_RS19315 (3898501) | 3898501..3899223 | - | 723 | WP_001307587.1 | class I SAM-dependent methyltransferase | - |
| FR957_RS19320 (3899257) | 3899257..3900012 | + | 756 | WP_001052720.1 | hydroxyacylglutathione hydrolase | - |
| FR957_RS19325 (3900084) | 3900084..3901442 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| FR957_RS19330 (3901490) | 3901490..3902260 | - | 771 | WP_046201554.1 | class I SAM-dependent methyltransferase | - |
| FR957_RS19335 (3902338) | 3902338..3903138 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| FR957_RS19340 (3903379) | 3903379..3904293 | + | 915 | WP_000648605.1 | DNA-binding transcriptional regulator YafC | - |
| FR957_RS19345 (3904290) | 3904290..3904460 | - | 171 | Protein_3803 | 2,5-didehydrogluconate reductase DkgB | - |
| FR957_RS19350 (3904471) | 3904471..3905607 | - | 1137 | WP_000420795.1 | ISAs1-like element ISEc1 family transposase | - |
| FR957_RS25235 (3905883) | 3905883..3906170 | + | 288 | WP_032141714.1 | hypothetical protein | - |
| FR957_RS19360 (3906426) | 3906426..3906956 | - | 531 | WP_023155453.1 | hypothetical protein | - |
| FR957_RS19365 (3906969) | 3906969..3909119 | - | 2151 | WP_253207526.1 | RHS repeat-associated core domain-containing protein | - |
| FR957_RS19370 (3909513) | 3909513..3910043 | - | 531 | WP_023155453.1 | hypothetical protein | - |
| FR957_RS19375 (3910056) | 3910056..3914567 | - | 4512 | WP_049589778.1 | RHS repeat-associated core domain-containing protein | - |
| FR957_RS19380 (3914598) | 3914598..3915029 | - | 432 | WP_001199686.1 | DcrB-related protein | - |
| FR957_RS19385 (3915057) | 3915057..3917276 | - | 2220 | WP_032141711.1 | type VI secretion system tip protein TssI/VgrG | - |
| FR957_RS19390 (3917301) | 3917301..3917648 | - | 348 | WP_100224276.1 | hypothetical protein | - |
| FR957_RS19395 (3917669) | 3917669..3918397 | - | 729 | WP_000036628.1 | hypothetical protein | - |
| FR957_RS19400 (3918452) | 3918452..3919228 | - | 777 | WP_024170797.1 | TagF domain-containing protein | - |
| FR957_RS19405 (3919228) | 3919228..3923094 | - | 3867 | WP_032217617.1 | type VI secretion system membrane subunit TssM | - |
| FR957_RS19410 (3923094) | 3923094..3923381 | - | 288 | WP_001542644.1 | hypothetical protein | - |
| FR957_RS19415 (3923390) | 3923390..3924064 | - | 675 | WP_001060994.1 | hypothetical protein | - |
| FR957_RS19420 (3924070) | 3924070..3925386 | - | 1317 | WP_001402123.1 | type VI secretion system protein TssL, long form | - |
| FR957_RS19425 (3925383) | 3925383..3926726 | - | 1344 | WP_000118770.1 | type VI secretion system baseplate subunit TssK | - |
| FR957_RS19430 (3926730) | 3926730..3927263 | - | 534 | WP_001402122.1 | type VI secretion system lipoprotein TssJ | - |
| FR957_RS19435 (3927331) | 3927331..3927816 | - | 486 | WP_097418292.1 | Hcp family type VI secretion system effector | - |
| FR957_RS19440 (3927930) | 3927930..3928301 | - | 372 | WP_000871596.1 | T6SS amidase immunity protein Tai4 family protein | - |
| FR957_RS19445 (3928298) | 3928298..3928783 | - | 486 | WP_000533466.1 | type VI secretion system amidase effector protein Tae4 | - |
| FR957_RS19450 (3928836) | 3928836..3930350 | - | 1515 | WP_000245849.1 | type VI secretion system contractile sheath large subunit | - |
| FR957_RS19455 (3930375) | 3930375..3930920 | - | 546 | WP_000996814.1 | type VI secretion system contractile sheath small subunit | - |
| FR957_RS19460 (3930982) | 3930982..3931272 | - | 291 | WP_000144225.1 | hypothetical protein | - |
| FR957_RS19465 (3931275) | 3931275..3931838 | - | 564 | WP_001040751.1 | hypothetical protein | - |
| FR957_RS19470 (3931851) | 3931851..3934484 | - | 2634 | WP_001542643.1 | type VI secretion system ATPase TssH | - |
| FR957_RS19475 (3934817) | 3934817..3935731 | + | 915 | WP_000804010.1 | type VI secretion system-associated protein TagK | - |
| FR957_RS19480 (3935718) | 3935718..3936548 | + | 831 | WP_000183810.1 | type VI secretion system accessory protein TagJ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|