NZ_CP0544071303319..1470757

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 167439 bp
Accession: NZ_CP054407        Location: 1303319..1470757         Organism: Escherichia coli strain KCJ3K291       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FR957_RS06410 (1301463) 1301463..1302761 + 1299 WP_000841103.1 alpha-ketoglutarate permease -
FR957_RS06415 (1302758) 1302758..1303081 - 324 WP_001300818.1 YfiM family lipoprotein -
FR957_RS06420 (1303127) 1303127..1304482 - 1356 WP_000949265.1 CDP-diacylglycerol--serine O-phosphatidyltransferase -
FR957_RS06425 (1304466) 1304466..1304507 - 42 WP_211180504.1 protein PssL -
FR957_RS06430 (1304596) 1304596..1307256 - 2661 WP_000082949.1 protein lysine acetyltransferase -
FR957_RS06435 (1307288) 1307288..1307986 - 699 WP_000138184.1 tRNA-uridine aminocarboxypropyltransferase -
FR957_RS06440 (1308055) 1308055..1308474 - 420 WP_001098726.1 thioredoxin TrxC -
FR957_RS06445 (1308681) 1308681..1309718 + 1038 WP_000997411.1 tRNA/rRNA methyltransferase -
FR957_RS06450 (1309766) 1309766..1310455 - 690 WP_001262723.1 uracil-DNA glycosylase -
FR957_RS06455 (1310760) 1310760..1311143 + 384 WP_000627804.1 autonomous glycyl radical cofactor GrcA -
FR957_RS06460 (1311199) 1311199..1311786 - 588 WP_000189207.1 cysteine/O-acetylserine transporter -
FR957_RS06465 (1311889) 1311889..1312770 + 882 WP_024251376.1 LysR family transcriptional regulator -
FR957_RS06470 (1312979) 1312979..1314313 - 1335 WP_000219193.1 ATP-dependent RNA helicase SrmB -
FR957_RS06475 (1314445) 1314445..1315182 + 738 WP_001371044.1 tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN -
FR957_RS06480 (1315167) 1315167..1316789 - 1623 WP_001094499.1 L-aspartate oxidase -
FR957_RS06485 (1317045) 1317045..1317200 + 156 WP_001303621.1 rpoE leader peptide RseD -
FR957_RS06490 (1317197) 1317197..1317772 + 576 WP_001295364.1 RNA polymerase sigma factor RpoE -
FR957_RS06495 (1317805) 1317805..1318455 + 651 WP_001168459.1 anti-sigma-E factor RseA -
FR957_RS06500 (1318455) 1318455..1319411 + 957 WP_000812053.1 sigma-E factor regulatory protein RseB -
FR957_RS06505 (1319408) 1319408..1319887 + 480 WP_000589070.1 SoxR-reducing system protein RseC -
FR957_RS06510 (1320085) 1320085..1321884 + 1800 WP_000790168.1 translation elongation factor 4 -
FR957_RS06515 (1321900) 1321900..1322874 + 975 WP_000002542.1 signal peptidase I -
FR957_RS06520 (1323147) 1323147..1323827 + 681 WP_001068343.1 ribonuclease III -
FR957_RS06525 (1323824) 1323824..1324729 + 906 WP_000020737.1 GTPase Era -
FR957_RS06530 (1324741) 1324741..1325469 + 729 WP_000399393.1 DNA repair protein RecO -
FR957_RS06535 (1325481) 1325481..1326212 + 732 WP_001297412.1 pyridoxine 5'-phosphate synthase -
FR957_RS06540 (1326212) 1326212..1326592 + 381 WP_000986029.1 holo-ACP synthase -
- (1326613) 1326613..1326689 - 77 NuclAT_11 - -
- (1326613) 1326613..1326689 - 77 NuclAT_11 - -
- (1326613) 1326613..1326689 - 77 NuclAT_11 - -
- (1326613) 1326613..1326689 - 77 NuclAT_11 - -
FR957_RS06545 (1327012) 1327012..1327092 + 81 WP_000128776.1 type I toxin-antitoxin system toxin ShoB -
FR957_RS06550 (1327286) 1327286..1327546 - 261 WP_001196283.1 4Fe-4S dicluster ferredoxin YfhL -
FR957_RS06555 (1327602) 1327602..1328450 - 849 WP_001013779.1 MurR/RpiR family transcriptional regulator -
FR957_RS06560 (1328659) 1328659..1329294 + 636 WP_000190658.1 phosphatidylglycerophosphatase C -
FR957_RS06565 (1329352) 1329352..1329855 + 504 WP_001297409.1 tRNA adenosine(34) deaminase TadA -
FR957_RS06570 (1329852) 1329852..1331408 - 1557 WP_000734212.1 membrane-bound lytic murein transglycosylase MltF -
FR957_RS06575 (1331666) 1331666..1335553 + 3888 WP_000970115.1 phosphoribosylformylglycinamidine synthase -
FR957_RS06580 (1336129) 1336129..1337556 + 1428 WP_001297612.1 two component system sensor histidine kinase QseE/GlrK -
FR957_RS06585 (1337721) 1337721..1338434 + 714 WP_001215888.1 two-component system QseEF-associated lipoprotein QseG -
FR957_RS06590 (1338424) 1338424..1339758 + 1335 WP_001298983.1 two-component system response regulator GlrR -
FR957_RS06595 (1339819) 1339819..1340157 + 339 WP_000717694.1 nitrogen regulatory protein P-II -
FR957_RS06600 (1340202) 1340202..1341392 - 1191 WP_000883122.1 NO-inducible flavohemoprotein -
FR957_RS06605 (1341720) 1341720..1342973 + 1254 WP_000919159.1 serine hydroxymethyltransferase -
FR957_RS06610 (1343037) 1343037..1344230 - 1194 WP_001299519.1 ROK family protein -
FR957_RS06615 (1344348) 1344348..1347629 + 3282 WP_053264724.1 DUF5107 domain-containing protein -
FR957_RS06620 (1347726) 1347726..1348709 + 984 WP_001124918.1 substrate-binding domain-containing protein -
FR957_RS06625 (1348732) 1348732..1350243 + 1512 WP_000493471.1 sugar ABC transporter ATP-binding protein -
FR957_RS06630 (1350268) 1350268..1351266 + 999 WP_001276691.1 ABC transporter permease -
FR957_RS06635 (1351299) 1351299..1352393 + 1095 WP_000700816.1 zinc-binding dehydrogenase -
FR957_RS06640 (1352405) 1352405..1353277 + 873 WP_000158547.1 aldose 1-epimerase -
FR957_RS06645 (1353325) 1353325..1353747 - 423 WP_001094726.1 DoxX family protein -
FR957_RS06650 (1353844) 1353844..1355046 - 1203 WP_000660797.1 phenylpropionate dioxygenase ferredoxin reductase subunit -
FR957_RS06655 (1355056) 1355056..1355868 - 813 WP_001281377.1 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase -
FR957_RS06660 (1355865) 1355865..1356185 - 321 WP_001080102.1 bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit -
FR957_RS06665 (1356185) 1356185..1356703 - 519 WP_001276072.1 3-phenylpropionate/cinnamic acid dioxygenase subunit beta -
FR957_RS06670 (1356700) 1356700..1358061 - 1362 WP_000211172.1 aromatic ring-hydroxylating dioxygenase subunit alpha -
FR957_RS06675 (1358197) 1358197..1359087 + 891 WP_000423256.1 DNA-binding transcriptional regulator HcaR -
FR957_RS06680 (1359247) 1359247..1360386 + 1140 WP_000244193.1 3-phenylpropionate MFS transporter -
FR957_RS06685 (1360378) 1360378..1361658 - 1281 WP_000983008.1 stationary phase inducible protein CsiE -
FR957_RS06690 (1361849) 1361849..1362703 - 855 WP_001299515.1 alpha/beta hydrolase -
FR957_RS06695 (1362848) 1362848..1363651 - 804 WP_000553451.1 inositol-1-monophosphatase -
FR957_RS06700 (1363770) 1363770..1364510 + 741 WP_000940019.1 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ -
FR957_RS06705 (1364780) 1364780..1365268 + 489 WP_001241357.1 Fe-S cluster assembly transcriptional regulator IscR -
FR957_RS06710 (1365380) 1365380..1366594 + 1215 WP_001295373.1 cysteine desulfurase -
FR957_RS06715 (1366622) 1366622..1367008 + 387 WP_000331707.1 Fe-S cluster assembly scaffold IscU -
FR957_RS06720 (1367025) 1367025..1367348 + 324 WP_000028953.1 iron-sulfur cluster assembly protein IscA -
FR957_RS06725 (1367444) 1367444..1367959 + 516 WP_000384411.1 co-chaperone HscB -
FR957_RS06730 (1367976) 1367976..1369826 + 1851 WP_040072378.1 Fe-S protein assembly chaperone HscA -
FR957_RS06735 (1369828) 1369828..1370163 + 336 WP_001124469.1 ISC system 2Fe-2S type ferredoxin -
FR957_RS06740 (1370175) 1370175..1370375 + 201 WP_000523616.1 Fe-S cluster assembly protein IscX -
FR957_RS06745 (1370553) 1370553..1371836 + 1284 WP_000133582.1 aminopeptidase PepB -
FR957_RS06750 (1371978) 1371978..1372754 + 777 WP_001299505.1 enhanced serine sensitivity protein SseB -
FR957_RS25125 (1372786) 1372786..1372911 - 126 WP_001385884.1 small toxic inner membrane protein TimP -
FR957_RS06755 (1373247) 1373247..1374092 - 846 WP_000108626.1 3-mercaptopyruvate sulfurtransferase -
FR957_RS06760 (1374299) 1374299..1379260 + 4962 WP_000736307.1 alpha2-macroglobulin -
FR957_RS06765 (1379261) 1379261..1381573 + 2313 WP_001137712.1 peptidoglycan glycosyltransferase PbpC -
FR957_RS06770 (1381722) 1381722..1382153 + 432 WP_000963837.1 nucleoside-diphosphate kinase -
FR957_RS06775 (1382303) 1382303..1383457 + 1155 WP_000003317.1 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN -
FR957_RS06780 (1383742) 1383742..1384755 + 1014 WP_001090844.1 cytoskeleton protein RodZ -
FR957_RS06785 (1384782) 1384782..1385900 + 1119 WP_000551807.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -
FR957_RS06790 (1386011) 1386011..1387285 + 1275 WP_001107167.1 histidine--tRNA ligase -
FR957_RS06795 (1387303) 1387303..1387923 + 621 WP_000409205.1 ancillary SecYEG translocon subunit YfgM -
FR957_RS06800 (1387934) 1387934..1389112 + 1179 WP_001177048.1 outer membrane protein assembly factor BamB -
FR957_RS06805 (1389229) 1389229..1390701 + 1473 WP_000249410.1 ribosome biogenesis GTPase Der -
FR957_RS06810 (1390771) 1390771..1390986 + 216 WP_001295478.1 zinc ribbon domain-containing protein -
FR957_RS06815 (1390983) 1390983..1392353 - 1371 WP_000937892.1 exodeoxyribonuclease VII large subunit -
FR957_RS06820 (1392515) 1392515..1393981 + 1467 WP_001299507.1 IMP dehydrogenase -
FR957_RS06825 (1394050) 1394050..1395627 + 1578 WP_000138282.1 glutamine-hydrolyzing GMP synthase -
FR957_RS06830 (1395936) 1395936..1397144 + 1209 WP_024248387.1 site-specific integrase -
FR957_RS06835 (1397429) 1397429..1397659 + 231 WP_000410046.1 AlpA family phage regulatory protein -
FR957_RS06840 (1397899) 1397899..1398798 + 900 WP_223366869.1 replication initiator protein A -
FR957_RS06845 (1399899) 1399899..1400225 - 327 WP_027920145.1 hypothetical protein -
FR957_RS06850 (1400228) 1400228..1401871 - 1644 WP_146939011.1 P-type conjugative transfer protein TrbL -
FR957_RS06855 (1401874) 1401874..1402056 - 183 WP_004690111.1 hypothetical protein -
FR957_RS06860 (1402059) 1402059..1402850 - 792 WP_073549825.1 P-type conjugative transfer protein TrbJ -
FR957_RS06865 (1403119) 1403119..1403343 - 225 WP_016943284.1 hypothetical protein -
FR957_RS06870 (1403346) 1403346..1403555 - 210 WP_000101767.1 TraC family protein -
FR957_RS06875 (1404100) 1404100..1404474 + 375 WP_146939009.1 conjugal transfer protein TraJ -
FR957_RS06880 (1404889) 1404889..1405068 + 180 WP_070533446.1 hypothetical protein -
FR957_RS06885 (1405111) 1405111..1406454 + 1344 WP_131041860.1 DarT ssDNA thymidine ADP-ribosyltransferase family protein -
FR957_RS06890 (1406454) 1406454..1407635 + 1182 WP_070533450.1 macro domain-containing protein -
FR957_RS06895 (1407843) 1407843..1408382 - 540 WP_000755179.1 DUF5384 family protein -
FR957_RS06900 (1408398) 1408398..1408916 - 519 WP_001295476.1 glycine zipper 2TM domain-containing protein -
FR957_RS06905 (1409227) 1409227..1409418 - 192 WP_000076001.1 YfgG family protein -
FR957_RS06910 (1409436) 1409436..1409588 + 153 WP_000017552.1 hypothetical protein -
FR957_RS06915 (1409770) 1409770..1412013 + 2244 WP_000772774.1 cyclic-guanylate-specific phosphodiesterase PdeF -
FR957_RS06920 (1412052) 1412052..1413593 - 1542 WP_001121363.1 exopolyphosphatase -
FR957_RS06925 (1413598) 1413598..1415664 - 2067 WP_000529576.1 polyphosphate kinase 1 -
FR957_RS06930 (1415835) 1415835..1416473 - 639 WP_001028614.1 phosphoribosylglycinamide formyltransferase -
FR957_RS06935 (1416473) 1416473..1417510 - 1038 WP_001295474.1 phosphoribosylformylglycinamidine cyclo-ligase -
FR957_RS06940 (1417835) 1417835..1418461 + 627 WP_001295473.1 uracil phosphoribosyltransferase -
FR957_RS06945 (1418547) 1418547..1419836 + 1290 WP_000198328.1 uracil permease -
FR957_RS06950 (1419931) 1419931..1420632 + 702 WP_001307333.1 DnaA inactivator Hda -
FR957_RS06955 (1420770) 1420770..1421129 - 360 WP_000166449.1 arsenate reductase (glutaredoxin) -
FR957_RS06960 (1421150) 1421150..1422613 - 1464 WP_000489667.1 beta-barrel assembly-enhancing protease -
FR957_RS06965 (1422826) 1422826..1423887 + 1062 WP_000892044.1 AI-2E family transporter -
FR957_RS06975 (1423925) 1423925..1424772 - 848 Protein_1367 formate transporter FocB -
FR957_RS06980 (1424794) 1424794..1426806 - 2013 WP_001251577.1 DNA-binding transcriptional regulator HyfR -
FR957_RS06985 (1426836) 1426836..1427249 - 414 WP_001307332.1 hydrogenase 4 assembly chaperone HyfJ -
FR957_RS06990 (1427242) 1427242..1427999 - 758 Protein_1370 hydrogenase 4 catalytic subunit HyfI -
FR957_RS06995 (1427996) 1427996..1428541 - 546 Protein_1371 hydrogenase 4 subunit H -
FR957_RS07000 (1428551) 1428551..1430218 - 1668 WP_001102282.1 hydrogenase 4 catalytic subunit HyfG -
FR957_RS07005 (1430208) 1430208..1431794 - 1587 Protein_1373 hydrogenase 4 subunit F -
FR957_RS07010 (1431799) 1431799..1432449 - 651 WP_000147987.1 hydrogenase 4 membrane subunit -
FR957_RS07015 (1432461) 1432461..1433898 - 1438 Protein_1375 hydrogenase 4 subunit HyfD -
FR957_RS07025 (1433915) 1433915..1434862 - 948 WP_001358398.1 hydrogenase 4 subunit HyfC -
FR957_RS07030 (1434873) 1434873..1436641 - 1769 Protein_1377 hydrogenase 4 subunit B -
FR957_RS07035 (1436890) 1436890..1437507 - 618 WP_001352202.1 hydrogenase 4 subunit HyfA -
FR957_RS07040 (1437760) 1437760..1438230 - 471 WP_001068682.1 thioredoxin-dependent thiol peroxidase -
FR957_RS07045 (1438230) 1438230..1438802 - 573 WP_000176187.1 glycine cleavage system transcriptional repressor -
FR957_RS07050 (1438948) 1438948..1439826 + 879 WP_001295469.1 4-hydroxy-tetrahydrodipicolinate synthase -
FR957_RS07055 (1439843) 1439843..1440877 + 1035 WP_001297320.1 outer membrane protein assembly factor BamC -
FR957_RS07060 (1441090) 1441090..1441803 + 714 WP_001295467.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -
FR957_RS07065 (1441957) 1441957..1442184 + 228 WP_000450524.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
FR957_RS07070 (1442184) 1442184..1442582 + 399 WP_000911331.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
FR957_RS07075 (1442729) 1442729..1443592 + 864 WP_001267507.1 neutral zinc metallopeptidase -
FR957_RS07080 (1443607) 1443607..1445622 + 2016 WP_001543081.1 tRNA cytosine(34) acetyltransferase TmcA -
FR957_RS07085 (1445696) 1445696..1446394 + 699 WP_000679812.1 esterase -
FR957_RS07090 (1446504) 1446504..1446704 - 201 WP_000383836.1 YpfN family protein -
FR957_RS07095 (1446732) 1446732..1447859 - 1128 WP_001277809.1 succinyl-diaminopimelate desuccinylase -
FR957_RS07100 (1447863) 1447863..1448219 - 357 WP_000258247.1 ArsC family reductase -
FR957_RS07105 (1448600) 1448600..1448659 + 60 WP_001386977.1 protein YpfM -
FR957_RS07110 (1448758) 1448758..1451871 - 3114 WP_001273115.1 multidrug efflux RND transporter permease AcrD -
FR957_RS07115 (1452035) 1452035..1453735 - 1701 WP_000636129.1 nitrate/nitrite two-component system sensor histidine kinase NarQ -
FR957_RS07120 (1453941) 1453941..1455920 + 1980 WP_001078875.1 formate-dependent uric acid utilization protein AegA -
FR957_RS07125 (1455988) 1455988..1456563 + 576 WP_000193711.1 GDP-mannose pyrophosphatase NudK -
FR957_RS07130 (1456689) 1456689..1457732 + 1044 WP_001270527.1 DUF1176 domain-containing protein -
FR957_RS07135 (1457809) 1457809..1459812 - 2004 WP_000087298.1 transketolase -
FR957_RS07140 (1459832) 1459832..1460782 - 951 WP_001003709.1 transaldolase -
FR957_RS07145 (1461071) 1461071..1463350 + 2280 WP_000342642.1 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase -
FR957_RS07150 (1463643) 1463643..1463978 + 336 WP_000356956.1 ethanolamine utilization microcompartment protein EutS -
FR957_RS07155 (1463991) 1463991..1464470 + 480 WP_000820764.1 ethanolamine utilization acetate kinase EutP -
FR957_RS07160 (1464445) 1464445..1465146 + 702 WP_000733903.1 ethanolamine utilization acetate kinase EutQ -
FR957_RS07165 (1465143) 1465143..1465946 + 804 WP_000651298.1 ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT -
FR957_RS07170 (1465943) 1465943..1466959 + 1017 WP_000582978.1 phosphate acetyltransferase -
FR957_RS07175 (1466998) 1466998..1467291 + 294 WP_000387713.1 ethanolamine utilization microcompartment protein EutM -
FR957_RS07180 (1467398) 1467398..1467685 + 288 WP_000762196.1 ethanolamine utilization microcompartment protein EutN -
FR957_RS07185 (1467697) 1467697..1469100 + 1404 WP_001075711.1 aldehyde dehydrogenase EutE -
FR957_RS07190 (1469111) 1469111..1469947 + 837 WP_000929726.1 ethanolamine utilization protein EutJ -
FR957_RS07195 (1469937) 1469937..1471124 + 1188 WP_001330930.1 ethanolamine utilization ethanol dehydrogenase EutG -
FR957_RS07200 (1471241) 1471241..1472467 + 1227 WP_000512372.1 ethanolamine utilization protein EutH -
FR957_RS07205 (1472464) 1472464..1473867 + 1404 WP_001097477.1 ethanolamine ammonia-lyase reactivating factor EutA -
FR957_RS07210 (1473879) 1473879..1475240 + 1362 WP_000769961.1 ethanolamine ammonia-lyase subunit alpha -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance