MGE detailed information
MGE type: Prophage MGE length: 47607 bp
Accession: NZ_CP054371 Location: 2096593..2144199 Organism: Escherichia coli strain SCU-316 Replicon: chromosome
Accession: NZ_CP054371 Location: 2096593..2144199 Organism: Escherichia coli strain SCU-316 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPE41_RS09720 () | 2092643..2093626 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| HPE41_RS09725 () | 2094104..2095477 | + | 1374 | WP_000123746.1 | ATP-dependent RNA helicase DbpA | - |
| HPE41_RS09730 () | 2095606..2096541 | - | 936 | WP_001157403.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| HPE41_RS09735 () | 2096593..2097828 | - | 1236 | WP_112033623.1 | Putative defective protein IntQ ; Integrase | Integrase |
| HPE41_RS09740 () | 2097830..2098045 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| HPE41_RS09745 () | 2098124..2098333 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 2098149..2098327 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2098149..2098327 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2098149..2098327 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2098149..2098327 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| HPE41_RS09750 () | 2098326..2098520 | - | 195 | WP_053889809.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| HPE41_RS09755 () | 2098577..2099386 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| HPE41_RS09760 () | 2099379..2101979 | - | 2601 | WP_000105139.1 | exodeoxyribonuclease VIII | - |
| HPE41_RS09765 () | 2102081..2102356 | - | 276 | WP_000632297.1 | protein RacC | - |
| HPE41_RS09770 () | 2102431..2102601 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| HPE41_RS09775 () | 2102601..2102822 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| HPE41_RS09780 () | 2103264..2103752 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| HPE41_RS09785 () | 2103749..2103904 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| HPE41_RS09790 () | 2104358..2104834 | - | 477 | WP_000948460.1 | DNA-binding transcriptional repressor RacR | - |
| HPE41_RS09795 () | 2104958..2105254 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| HPE41_RS09800 () | 2105277..2105699 | + | 423 | WP_000693797.1 | phage protein | - |
| HPE41_RS09805 () | 2105712..2106569 | + | 858 | WP_174166948.1 | DUF1376 domain-containing protein | - |
| HPE41_RS09810 () | 2106576..2107322 | + | 747 | WP_174166949.1 | ATP-binding protein | - |
| HPE41_RS09815 () | 2107345..2108106 | + | 762 | WP_000450660.1 | DUF1627 domain-containing protein | - |
| HPE41_RS09820 () | 2108122..2108553 | + | 432 | WP_174166950.1 | DUF977 family protein | - |
| HPE41_RS09825 () | 2108747..2109901 | + | 1155 | WP_000385105.1 | ATP-binding protein | - |
| HPE41_RS09830 () | 2109876..2112140 | + | 2265 | WP_016232657.1 | S8 family peptidase | - |
| HPE41_RS09835 () | 2112557..2112802 | + | 246 | Protein_1916 | DUF1367 family protein | - |
| HPE41_RS09840 () | 2112875..2113995 | + | 1121 | WP_087451024.1 | IS3 family transposase ISSen4 | Transposase |
| HPE41_RS09845 () | 2114025..2114381 | + | 357 | Protein_1918 | DUF1367 family protein | - |
| HPE41_RS09850 () | 2114381..2114671 | + | 291 | WP_000247763.1 | DUF1364 domain-containing protein | - |
| HPE41_RS09855 () | 2114668..2115210 | + | 543 | WP_000640161.1 | DUF1133 family protein | - |
| HPE41_RS09860 () | 2116255..2116683 | + | 429 | WP_000506936.1 | cell envelope integrity protein TolA | - |
| HPE41_RS09865 () | 2116855..2117229 | + | 375 | WP_001348108.1 | hypothetical protein | - |
| HPE41_RS09870 () | 2117481..2117696 | + | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| HPE41_RS09875 () | 2117696..2118193 | + | 498 | WP_001135310.1 | lysozyme RrrD | - |
| HPE41_RS09880 () | 2118410..2118595 | + | 186 | WP_001228688.1 | prophage lysis lipoprotein RzoD | - |
| HPE41_RS09885 () | 2118792..2120249 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| HPE41_RS09890 () | 2120387..2121178 | + | 792 | WP_001291094.1 | ParB/Srx family N-terminal domain-containing protein | - |
| HPE41_RS09895 () | 2121171..2122103 | + | 933 | WP_001204037.1 | hypothetical protein | - |
| HPE41_RS09900 () | 2122039..2122290 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| HPE41_RS09905 () | 2122294..2123388 | + | 1095 | WP_059338826.1 | terminase small subunit | - |
| HPE41_RS09910 () | 2123369..2124670 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| HPE41_RS09915 () | 2124673..2126079 | + | 1407 | WP_000763704.1 | DUF4055 domain-containing protein | - |
| HPE41_RS09920 () | 2126063..2127175 | + | 1113 | Protein_1933 | hypothetical protein | - |
| HPE41_RS09925 () | 2127280..2128044 | + | 765 | WP_000770042.1 | hypothetical protein | - |
| HPE41_RS09930 () | 2128143..2129282 | + | 1140 | WP_000918487.1 | hypothetical protein | - |
| HPE41_RS09935 () | 2129325..2129501 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| HPE41_RS09940 () | 2129505..2129900 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| HPE41_RS09945 () | 2129900..2130283 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| HPE41_RS09950 () | 2130284..2130664 | + | 381 | WP_001029815.1 | hypothetical protein | - |
| HPE41_RS09955 () | 2130661..2131053 | + | 393 | WP_000144678.1 | hypothetical protein | - |
| HPE41_RS09960 () | 2131122..2132102 | + | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| HPE41_RS09965 () | 2132392..2133597 | + | 1206 | WP_089589136.1 | phage tail tape measure protein | - |
| HPE41_RS09970 () | 2133590..2133928 | + | 339 | WP_000024051.1 | phage tail protein | - |
| HPE41_RS09975 () | 2133928..2134626 | + | 699 | WP_001152432.1 | phage minor tail protein L | - |
| HPE41_RS09980 () | 2134632..2135375 | + | 744 | WP_112033792.1 | C40 family peptidase | - |
| HPE41_RS09985 () | 2135312..2135944 | + | 633 | WP_174166951.1 | tail assembly protein | - |
| HPE41_RS09990 () | 2136004..2139483 | + | 3480 | WP_174166952.1 | host specificity protein J | - |
| HPE41_RS09995 () | 2139550..2140149 | + | 600 | WP_174166953.1 | Outer membrane protein X | VF |
| HPE41_RS10000 () | 2140214..2143615 | + | 3402 | WP_174166954.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HPE41_RS10005 () | 2143615..2144199 | + | 585 | WP_112033700.1 | tail fiber assembly protein | - |
| HPE41_RS10010 () | 2144412..2145269 | - | 858 | WP_000968131.1 | iron/manganese ABC transporter permease subunit SitD | - |
| HPE41_RS10015 () | 2145266..2146123 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| HPE41_RS10020 () | 2146120..2146947 | - | 828 | WP_000983721.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| HPE41_RS10025 () | 2146947..2147861 | - | 915 | WP_000286867.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| HPE41_RS10030 () | 2148446..2148880 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|