MGE detailed information
MGE type: Genomic_island MGE length: 30192 bp
Accession: NZ_CP054368 Location: 2360195..2390386 Organism: Escherichia coli strain SCU-115 Replicon: chromosome
Accession: NZ_CP054368 Location: 2360195..2390386 Organism: Escherichia coli strain SCU-115 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPE48_RS11615 () | 2356726..2357451 | - | 726 | WP_000066580.1 | type 1 fimbria chaperone FimC | - |
| HPE48_RS11620 () | 2357488..2358027 | - | 540 | WP_000824116.1 | type 1 fimbrial protein | - |
| HPE48_RS11625 () | 2358092..2358640 | - | 549 | WP_001523806.1 | type 1 fimbrial major subunit FimA | - |
| HPE48_RS11630 () | 2359121..2359717 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| HPE48_RS11635 () | 2360195..2360797 | - | 603 | WP_000790574.1 | Tyrosine recombinase XerC | VF |
| HPE48_RS11640 () | 2362261..2362977 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HPE48_RS11645 () | 2362997..2364103 | + | 1107 | WP_001357986.1 | N-acetylneuraminate epimerase | - |
| HPE48_RS11650 () | 2364168..2365148 | + | 981 | WP_174143895.1 | sialate O-acetylesterase | - |
| HPE48_RS11655 () | 2365156..2365806 | - | 651 | WP_001037969.1 | HNH endonuclease | - |
| HPE48_RS11660 () | 2365943..2366815 | + | 873 | WP_000168576.1 | HNH endonuclease | - |
| HPE48_RS11665 () | 2366860..2367039 | + | 180 | WP_001153034.1 | hypothetical protein | - |
| HPE48_RS11670 () | 2367438..2369201 | - | 1764 | WP_021536709.1 | hypothetical protein | - |
| HPE48_RS11675 () | 2370296..2371093 | - | 798 | WP_174143896.1 | hypothetical protein | VF |
| HPE48_RS11680 () | 2371207..2371482 | - | 276 | WP_174143897.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HPE48_RS11685 () | 2371486..2371734 | - | 249 | WP_024187601.1 | ribbon-helix-helix domain-containing protein | - |
| HPE48_RS11690 () | 2371810..2372643 | - | 834 | WP_174143898.1 | DUF4942 domain-containing protein | - |
| HPE48_RS11695 () | 2372758..2373099 | - | 342 | WP_174143899.1 | TA system toxin CbtA family protein | Toxin Detail |
| HPE48_RS11700 () | 2373130..2373465 | - | 336 | WP_059219072.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HPE48_RS11705 () | 2373465..2373938 | - | 474 | WP_174143900.1 | DNA repair protein RadC | - |
| HPE48_RS11710 () | 2373968..2374786 | - | 819 | WP_174143901.1 | DUF945 domain-containing protein | - |
| HPE48_RS11715 () | 2375025..2375978 | - | 954 | Protein_2296 | hypothetical protein | - |
| HPE48_RS11720 () | 2376571..2377185 | + | 615 | WP_174143902.1 | inovirus Gp2 family protein | - |
| HPE48_RS11725 () | 2377303..2377521 | + | 219 | WP_001064742.1 | AlpA family phage regulatory protein | - |
| HPE48_RS11730 () | 2377742..2378527 | - | 786 | WP_174143903.1 | hypothetical protein | - |
| HPE48_RS11735 () | 2378539..2379552 | - | 1014 | WP_174143904.1 | 50S ribosome-binding GTPase | - |
| HPE48_RS11740 () | 2379591..2380274 | - | 684 | WP_174143905.1 | WYL domain-containing protein | - |
| HPE48_RS11745 () | 2380591..2381568 | - | 978 | WP_174143906.1 | toll/interleukin-1 receptor domain-containing protein | - |
| HPE48_RS11750 () | 2381784..2383493 | + | 1710 | WP_174143907.1 | type I restriction-modification system subunit M | - |
| HPE48_RS11755 () | 2383480..2384871 | + | 1392 | WP_174143908.1 | hypothetical protein | - |
| HPE48_RS11760 () | 2384864..2386057 | + | 1194 | WP_174143909.1 | DUF4268 domain-containing protein | - |
| HPE48_RS11765 () | 2386073..2389207 | + | 3135 | WP_174143910.1 | type I restriction endonuclease subunit R | - |
| HPE48_RS11770 () | 2389263..2389761 | + | 499 | Protein_2307 | hypothetical protein | - |
| HPE48_RS11775 () | 2390456..2391334 | - | 879 | WP_174143911.1 | HNH endonuclease | - |
| HPE48_RS11780 () | 2391543..2392811 | - | 1269 | WP_174143912.1 | integrase arm-type DNA-binding domain-containing protein | - |
| HPE48_RS11790 () | 2393292..2394311 | + | 1020 | WP_001385631.1 | NADPH-dependent aldehyde reductase Ahr | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|