MGE detailed information
MGE type: Genomic_island MGE length: 25661 bp
Accession: NZ_CP054363 Location: 3664519..3690179 Organism: Escherichia coli strain SCU-171 Replicon: chromosome
Accession: NZ_CP054363 Location: 3664519..3690179 Organism: Escherichia coli strain SCU-171 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPE49_RS17635 () | 3660891..3662966 | + | 2076 | WP_001187275.1 | protease Lon-related BREX system protein BrxL | - |
| HPE49_RS17640 () | 3663280..3664385 | - | 1106 | Protein_3442 | IS3 family transposase | - |
| HPE49_RS17645 () | 3664519..3665170 | - | 652 | Protein_3443 | GIY-YIG nuclease family protein | - |
| HPE49_RS17650 () | 3665208..3666182 | - | 975 | WP_042106722.1 | hypothetical protein | - |
| HPE49_RS17655 () | 3666210..3666482 | - | 273 | WP_042106720.1 | hypothetical protein | - |
| HPE49_RS17660 () | 3666479..3667022 | - | 544 | Protein_3446 | hypothetical protein | - |
| HPE49_RS17665 () | 3667207..3668414 | + | 1208 | WP_085948812.1 | IS3 family transposase ISEc48 | Transposase |
| HPE49_RS17670 () | 3669044..3669727 | + | 684 | WP_042106716.1 | WYL domain-containing protein | - |
| HPE49_RS17675 () | 3669766..3670779 | + | 1014 | WP_042106715.1 | 50S ribosome-binding GTPase | - |
| HPE49_RS17680 () | 3670791..3671576 | + | 786 | WP_042106714.1 | hypothetical protein | - |
| HPE49_RS17685 () | 3671791..3672009 | - | 219 | WP_042106713.1 | AlpA family transcriptional regulator | - |
| HPE49_RS17690 () | 3672127..3672741 | - | 615 | WP_000772910.1 | inovirus Gp2 family protein | - |
| HPE49_RS17695 () | 3673334..3674286 | + | 953 | Protein_3453 | hypothetical protein | - |
| HPE49_RS17700 () | 3674523..3675341 | + | 819 | WP_024223204.1 | DUF945 domain-containing protein | - |
| HPE49_RS17705 () | 3675371..3675844 | + | 474 | WP_001296921.1 | DNA repair protein RadC | - |
| HPE49_RS17710 () | 3675844..3676179 | + | 336 | WP_001296928.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HPE49_RS17715 () | 3676210..3676551 | + | 342 | WP_001683515.1 | TA system toxin CbtA family protein | Toxin Detail |
| HPE49_RS17720 () | 3676666..3677499 | + | 834 | WP_032218973.1 | DUF4942 domain-containing protein | - |
| HPE49_RS17725 () | 3677576..3677824 | + | 249 | WP_032218975.1 | ribbon-helix-helix domain-containing protein | - |
| HPE49_RS17730 () | 3677828..3678103 | + | 276 | WP_032218977.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HPE49_RS17735 () | 3678217..3679014 | + | 798 | WP_032218979.1 | hypothetical protein | VF |
| HPE49_RS17740 () | 3679834..3681870 | + | 2037 | WP_000417002.1 | hypothetical protein | - |
| HPE49_RS17745 () | 3682493..3683365 | - | 873 | WP_000168564.1 | HNH endonuclease | - |
| HPE49_RS17750 () | 3683502..3684152 | + | 651 | WP_001037972.1 | HNH endonuclease | - |
| HPE49_RS17755 () | 3684160..3685140 | - | 981 | WP_000991418.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| HPE49_RS17760 () | 3685205..3686311 | - | 1107 | WP_001317598.1 | N-acetylneuraminate epimerase | - |
| HPE49_RS17765 () | 3686331..3687047 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HPE49_RS17770 () | 3688503..3689105 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| HPE49_RS17775 () | 3689583..3690179 | + | 597 | WP_000044710.1 | Tyrosine recombinase XerD | VF |
| HPE49_RS17780 () | 3690660..3691208 | + | 549 | WP_000695543.1 | type 1 fimbrial major subunit FimA | - |
| HPE49_RS17785 () | 3691273..3691806 | + | 534 | WP_077775838.1 | type 1 fimbrial protein | - |
| HPE49_RS17790 () | 3691843..3692568 | + | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|