MGE detailed information
MGE type: Genomic_island MGE length: 11946 bp
Accession: NZ_CP054353 Location: 4487277..4499222 Organism: Escherichia coli strain SCU-172 Replicon: chromosome
Accession: NZ_CP054353 Location: 4487277..4499222 Organism: Escherichia coli strain SCU-172 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPE50_RS22175 () | 4483602..4484810 | - | 1209 | WP_001001866.1 | propionate kinase | - |
| HPE50_RS22180 () | 4484836..4486167 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| HPE50_RS22185 () | 4486189..4487178 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| HPE50_RS22190 () | 4487277..4488215 | - | 939 | WP_000104197.1 | transcriptional regulator TdcA | - |
| HPE50_RS22195 () | 4488404..4488748 | + | 345 | WP_000145829.1 | transcriptional activator TdcR | - |
| HPE50_RS22200 () | 4489004..4489543 | + | 540 | WP_000675744.1 | hypothetical protein | - |
| HPE50_RS22205 () | 4489565..4490740 | + | 1176 | WP_087900223.1 | YhaC family protein | - |
| HPE50_RS22215 () | 4491269..4492414 | - | 1146 | WP_001330125.1 | glycerate 2-kinase | - |
| HPE50_RS22220 () | 4492511..4493401 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| HPE50_RS22225 () | 4493431..4494201 | - | 771 | WP_001058217.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| HPE50_RS22230 () | 4494217..4495551 | - | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| HPE50_RS22235 () | 4496018..4496715 | - | 698 | Protein_4335 | IS1 family transposase IS1G | Transposase |
| HPE50_RS22240 () | 4496772..4498274 | + | 1503 | Protein_4336 | galactarate dehydratase | - |
| HPE50_RS22245 () | 4498423..4498758 | + | 336 | WP_001571956.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| HPE50_RS22250 () | 4498758..4499222 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| HPE50_RS22255 () | 4499277..4500086 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| HPE50_RS22260 () | 4500335..4501615 | + | 1281 | WP_000681958.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| HPE50_RS22265 () | 4501638..4502111 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| HPE50_RS22270 () | 4502122..4502901 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| HPE50_RS22275 () | 4502891..4503769 | + | 879 | WP_174183276.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| HPE50_RS22280 () | 4503787..4504221 | + | 435 | WP_000948834.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|