MGE detailed information
MGE type: Genomic_island MGE length: 20242 bp
Accession: NZ_CP054345 Location: 4711105..4731346 Organism: Escherichia coli strain SCU-176 Replicon: chromosome
Accession: NZ_CP054345 Location: 4711105..4731346 Organism: Escherichia coli strain SCU-176 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPE52_RS22655 () | 4706129..4706458 | + | 330 | WP_000481835.1 | multidrug efflux SMR transporter | - |
| HPE52_RS22660 () | 4706682..4707008 | - | 327 | Protein_4431 | transposase | - |
| HPE52_RS22665 () | 4707108..4708052 | - | 945 | WP_001521641.1 | DNA-binding transcriptional regulator DsdC | - |
| HPE52_RS22670 () | 4708270..4709607 | + | 1338 | WP_174165899.1 | D-serine transporter DsdX | - |
| HPE52_RS22675 () | 4709625..4710956 | + | 1332 | WP_001521644.1 | D-serine ammonia-lyase | - |
| HPE52_RS22680 () | 4711132..4712285 | + | 1154 | Protein_4435 | IS3 family transposase | - |
| HPE52_RS22685 () | 4712298..4712633 | + | 336 | WP_171874368.1 | IS3 family transposase ISEcl1 | Transposase |
| HPE52_RS22690 () | 4712844..4713080 | - | 237 | WP_000958091.1 | AlpA family transcriptional regulator | - |
| HPE52_RS22695 () | 4713149..4713721 | - | 573 | WP_001521648.1 | hypothetical protein | - |
| HPE52_RS22700 () | 4713979..4714545 | - | 567 | WP_112917218.1 | inovirus-type Gp2 protein | - |
| HPE52_RS22705 () | 4715800..4716838 | + | 1039 | Protein_4440 | IS481 family transposase | - |
| HPE52_RS22710 () | 4716947..4718737 | - | 1791 | WP_001521654.1 | AAA family ATPase | - |
| HPE52_RS22715 () | 4719322..4720053 | - | 732 | WP_001075471.1 | inovirus Gp2 family protein | - |
| HPE52_RS22720 () | 4721554..4722684 | - | 1131 | WP_001521655.1 | hypothetical protein | - |
| HPE52_RS22725 () | 4722869..4723753 | + | 885 | WP_000010407.1 | 50S ribosome-binding GTPase | - |
| HPE52_RS22730 () | 4723956..4724636 | + | 681 | WP_073313349.1 | WYL domain-containing protein | - |
| HPE52_RS22735 () | 4724784..4725461 | + | 678 | WP_174165906.1 | hypothetical protein | - |
| HPE52_RS22740 () | 4725467..4725700 | + | 234 | WP_001521659.1 | DUF905 family protein | - |
| HPE52_RS22745 () | 4725799..4726617 | + | 819 | WP_174165900.1 | DUF945 domain-containing protein | - |
| HPE52_RS22750 () | 4726709..4727194 | + | 486 | WP_021524627.1 | antirestriction protein | - |
| HPE52_RS22755 () | 4727210..4727686 | + | 477 | WP_001186724.1 | RadC family protein | - |
| HPE52_RS22760 () | 4727772..4727993 | + | 222 | WP_001521666.1 | DUF987 domain-containing protein | - |
| HPE52_RS22765 () | 4728073..4728441 | + | 369 | WP_001285610.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HPE52_RS22770 () | 4728530..4728907 | + | 378 | WP_001521667.1 | TA system toxin CbtA family protein | Toxin Detail |
| HPE52_RS22775 () | 4728904..4729053 | + | 150 | Protein_4454 | hypothetical protein | - |
| HPE52_RS22780 () | 4729129..4729326 | + | 198 | WP_086795284.1 | DUF957 domain-containing protein | - |
| HPE52_RS22785 () | 4729411..4730253 | + | 843 | WP_001521669.1 | DUF4942 domain-containing protein | - |
| HPE52_RS22790 () | 4730849..4731346 | + | 498 | WP_097430550.1 | hypothetical protein | - |
| HPE52_RS22795 () | 4731513..4732436 | + | 924 | WP_097430551.1 | carboxylate/amino acid/amine transporter | - |
| HPE52_RS22800 () | 4732440..4733258 | - | 819 | WP_000779409.1 | lipoprotein NlpA | - |
| HPE52_RS22805 () | 4733480..4733773 | + | 294 | WP_001297978.1 | hypothetical protein | - |
| HPE52_RS22810 () | 4733814..4734911 | - | 1098 | WP_115766513.1 | purine ribonucleoside efflux pump NepI | - |
| HPE52_RS22815 () | 4735122..4735574 | - | 453 | WP_001295241.1 | DUF1198 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|