MGE detailed information
MGE type: Genomic_island MGE length: 37952 bp
Accession: NZ_CP054345 Location: 3792454..3830405 Organism: Escherichia coli strain SCU-176 Replicon: chromosome
Accession: NZ_CP054345 Location: 3792454..3830405 Organism: Escherichia coli strain SCU-176 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPE52_RS18250 () | 3788480..3789205 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| HPE52_RS18255 () | 3789242..3789781 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| HPE52_RS18260 () | 3789846..3790394 | - | 549 | WP_000695543.1 | type 1 fimbrial major subunit FimA | - |
| HPE52_RS18265 () | 3790873..3791469 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| HPE52_RS18270 () | 3791947..3792354 | - | 408 | Protein_3574 | type 1 fimbria regulatory protein FimB | - |
| HPE52_RS18275 () | 3792454..3792972 | + | 519 | WP_000115885.1 | hypothetical protein | VF |
| HPE52_RS18280 () | 3792991..3794211 | + | 1221 | WP_000343765.1 | ISL3 family transposase ISEc53 | Transposase |
| HPE52_RS18285 () | 3794239..3794442 | - | 204 | Protein_3577 | Tyrosine recombinase XerD | VF |
| HPE52_RS18290 () | 3795896..3796612 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HPE52_RS18295 () | 3796632..3797738 | + | 1107 | WP_001295733.1 | N-acetylneuraminate epimerase | - |
| HPE52_RS18300 () | 3797802..3798782 | + | 981 | WP_000991462.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| HPE52_RS18305 () | 3799365..3800408 | - | 1044 | WP_001363826.1 | hypothetical protein | - |
| HPE52_RS18310 () | 3800534..3801681 | + | 1148 | WP_085949154.1 | IS3 family transposase ISEc52 | Transposase |
| HPE52_RS18315 () | 3802570..3804645 | + | 2076 | WP_000366620.1 | AAA family ATPase | - |
| HPE52_RS18320 () | 3804638..3805924 | + | 1287 | WP_000504875.1 | McrC family protein | - |
| HPE52_RS18325 () | 3806034..3807773 | + | 1740 | WP_097430644.1 | Alw26I/Eco31I/Esp3I family type II restriction endonuclease | - |
| HPE52_RS18330 () | 3807786..3808976 | - | 1191 | WP_001295727.1 | DNA cytosine methyltransferase | - |
| HPE52_RS18335 () | 3808969..3810609 | - | 1641 | WP_001332039.1 | Alw26I/Eco31I/Esp3I family type II restriction adenine-specific DNA-methyltransferase | - |
| HPE52_RS18340 () | 3811005..3811751 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| HPE52_RS18345 () | 3811766..3813307 | - | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| HPE52_RS18350 () | 3813901..3814077 | - | 177 | Protein_3590 | IS3 family transposase ISSen1 | Transposase |
| HPE52_RS18355 () | 3814441..3814599 | - | 159 | WP_001467148.1 | hypothetical protein | - |
| HPE52_RS18360 () | 3814591..3814781 | - | 191 | Protein_3592 | hypothetical protein | - |
| HPE52_RS18365 () | 3814699..3814875 | - | 177 | WP_000839286.1 | DUF957 domain-containing protein | - |
| HPE52_RS18370 () | 3814892..3815380 | - | 489 | WP_000761690.1 | hypothetical protein | - |
| HPE52_RS18375 () | 3815377..3815754 | - | 378 | WP_000854759.1 | TA system toxin CbtA family protein | Toxin Detail |
| HPE52_RS18380 () | 3815844..3816212 | - | 369 | WP_001295723.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HPE52_RS18385 () | 3816375..3816596 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| HPE52_RS18390 () | 3816659..3817135 | - | 477 | WP_001186775.1 | RadC family protein | - |
| HPE52_RS18395 () | 3817151..3817624 | - | 474 | WP_001350782.1 | antirestriction protein | - |
| HPE52_RS18400 () | 3817719..3817966 | - | 248 | Protein_3600 | antirestriction protein | - |
| HPE52_RS18405 () | 3817966..3818784 | - | 819 | WP_001234738.1 | DUF945 domain-containing protein | - |
| HPE52_RS18410 () | 3818939..3819097 | - | 159 | WP_001323397.1 | DUF905 family protein | - |
| HPE52_RS18415 () | 3819168..3822014 | - | 2847 | WP_174165886.1 | Ag43/Cah family autotransporter adhesin | - |
| HPE52_RS18420 () | 3822386..3823258 | - | 873 | WP_001069743.1 | GTPase family protein | - |
| HPE52_RS18425 () | 3823343..3824260 | - | 918 | WP_000250228.1 | hypothetical protein | - |
| HPE52_RS18430 () | 3825461..3826063 | - | 603 | WP_000813435.1 | hypothetical protein | - |
| HPE52_RS18435 () | 3826159..3826365 | - | 207 | WP_000211308.1 | helix-turn-helix domain-containing protein | - |
| HPE52_RS18440 () | 3827139..3827288 | + | 150 | WP_071526287.1 | hemolysin activation protein | - |
| HPE52_RS18445 () | 3827621..3827818 | - | 198 | WP_001547002.1 | hypothetical protein | - |
| HPE52_RS18450 () | 3827940..3828026 | + | 87 | Protein_3610 | inovirus Gp2 family protein | - |
| HPE52_RS18455 () | 3828018..3828587 | + | 570 | WP_000221530.1 | inovirus Gp2 family protein | - |
| HPE52_RS18460 () | 3828847..3829248 | + | 402 | WP_000270962.1 | hypothetical protein | - |
| HPE52_RS18465 () | 3829236..3829670 | + | 435 | WP_001221615.1 | zinc-ribbon domain-containing protein | - |
| HPE52_RS18470 () | 3830016..3830405 | + | 390 | WP_001282144.1 | IS66 family transposase ISEc8 | Transposase |
| HPE52_RS18475 () | 3830402..3830749 | + | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| HPE52_RS18480 () | 3830799..3832184 | + | 1386 | WP_000998019.1 | IS66 family transposase | - |
| HPE52_RS18485 () | 3832423..3833781 | - | 1359 | WP_000823243.1 | esterase-like activity of phytase family protein | - |
| HPE52_RS18490 () | 3834062..3834193 | + | 132 | Protein_3618 | IS3 family transposase | - |
| HPE52_RS18495 () | 3834353..3835050 | - | 698 | Protein_3619 | IS1 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|