MGE detailed information
MGE type: Genomic_island MGE length: 47361 bp
Accession: NZ_CP054236 Location: 4110213..4157573 Organism: Escherichia coli strain EcPF5 Replicon: chromosome
Accession: NZ_CP054236 Location: 4110213..4157573 Organism: Escherichia coli strain EcPF5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HR070_RS19775 () | 4106414..4107001 | + | 588 | WP_021517789.1 | transcriptional regulator BetI | - |
| HR070_RS19780 () | 4107015..4108487 | + | 1473 | WP_001443225.1 | betaine-aldehyde dehydrogenase | - |
| HR070_RS19785 () | 4108501..4110171 | + | 1671 | WP_001159142.1 | choline dehydrogenase | - |
| HR070_RS19790 () | 4111256..4111819 | + | 564 | WP_001295805.1 | Tyrosine recombinase XerD | VF |
| HR070_RS19795 () | 4112149..4112943 | + | 795 | WP_001304859.1 | LuxR family transcriptional regulator HyxR | - |
| HR070_RS19800 () | 4113097..4113858 | + | 762 | WP_001213046.1 | protein HyxA | - |
| HR070_RS19805 () | 4113900..4114982 | + | 1083 | Protein_3877 | hypothetical protein | - |
| HR070_RS19810 () | 4115004..4116197 | + | 1194 | WP_071787751.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| HR070_RS19815 () | 4116381..4117049 | + | 669 | WP_001005270.1 | membrane protein | - |
| HR070_RS19820 () | 4117292..4117987 | - | 696 | WP_001298555.1 | lactate utilization protein C | - |
| HR070_RS19825 () | 4117980..4119407 | - | 1428 | WP_000023919.1 | iron-sulfur cluster-binding protein | - |
| HR070_RS19830 () | 4119418..4120137 | - | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| HR070_RS19835 () | 4120663..4121517 | - | 855 | WP_021517788.1 | DNA-binding transcriptional regulator RclR | - |
| HR070_RS19840 () | 4121744..4123069 | + | 1326 | WP_001046333.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| HR070_RS19845 () | 4123178..4123414 | + | 237 | WP_000474088.1 | DUF1471 domain-containing protein | - |
| HR070_RS19850 () | 4123426..4124019 | + | 594 | WP_001298546.1 | reactive chlorine species resistance protein RclC | - |
| HR070_RS19855 () | 4124179..4125048 | - | 870 | WP_176324890.1 | aldo/keto reductase | - |
| HR070_RS19860 () | 4125296..4126153 | + | 858 | WP_000620996.1 | Right origin-binding protein | VF |
| HR070_RS19865 () | 4126278..4130528 | - | 4251 | WP_000092538.1 | Invasin | VF |
| HR070_RS19870 () | 4131094..4131945 | + | 852 | WP_001174452.1 | aldo/keto reductase | - |
| HR070_RS19875 () | 4131972..4132961 | + | 990 | WP_001172293.1 | aldo/keto reductase | - |
| HR070_RS19880 () | 4132992..4133885 | - | 894 | WP_001356933.1 | HTH-type transcriptional regulator PgrR | VF |
| HR070_RS19885 () | 4134085..4135011 | - | 927 | WP_001304867.1 | HTH-type transcriptional regulator PgrR | VF |
| HR070_RS19890 () | 4135168..4136088 | + | 921 | WP_000860032.1 | alpha/beta hydrolase | - |
| HR070_RS19895 () | 4136260..4137402 | + | 1143 | WP_000182341.1 | NADH-dependent flavin oxidoreductase | - |
| HR070_RS19900 () | 4137875..4137976 | + | 102 | WP_000662258.1 | hypothetical protein | - |
| HR070_RS19905 () | 4138341..4138604 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| HR070_RS19910 () | 4138604..4138744 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| HR070_RS19915 () | 4138814..4139004 | - | 191 | Protein_3899 | hypothetical protein | - |
| HR070_RS19920 () | 4139828..4140370 | + | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| HR070_RS19925 () | 4140445..4141032 | + | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| HR070_RS19930 () | 4141089..4141757 | + | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| HR070_RS19935 () | 4141783..4144308 | + | 2526 | WP_001131117.1 | putative outer membrane usher protein EcpC | VF |
| HR070_RS19940 () | 4144298..4145941 | + | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| HR070_RS19945 () | 4145910..4146620 | + | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| HR070_RS19950 () | 4146927..4147256 | + | 330 | WP_001443224.1 | YkgJ family cysteine cluster protein | - |
| HR070_RS19955 () | 4147268..4147431 | - | 164 | Protein_3907 | tail fiber assembly protein | - |
| HR070_RS19960 () | 4147505..4148119 | - | 615 | WP_001019923.1 | YagU family protein | - |
| HR070_RS19965 () | 4148382..4148519 | - | 138 | WP_000146239.1 | hypothetical protein | - |
| HR070_RS19970 () | 4148568..4148726 | + | 159 | Protein_3910 | integrase | - |
| HR070_RS19975 () | 4148943..4149636 | - | 694 | Protein_3911 | IS1 family transposase | - |
| HR070_RS19980 () | 4150229..4154359 | + | 4131 | WP_001034006.1 | Hemoglobin-binding protease hbp autotransporter | VF |
| HR070_RS19985 () | 4154515..4155009 | + | 495 | WP_001059463.1 | Transcriptional repressor MprA | VF |
| HR070_RS19990 () | 4155444..4155782 | - | 339 | WP_000772639.1 | Arm DNA-binding domain-containing protein | - |
| HR070_RS19995 () | 4156131..4156499 | - | 369 | WP_001094398.1 | TA system toxin CbtA family protein | Toxin Detail |
| HR070_RS20000 () | 4156520..4156825 | - | 306 | WP_077249034.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HR070_RS20005 () | 4156929..4157573 | - | 645 | WP_148458590.1 | antitoxin of toxin-antitoxin stability system | - |
| HR070_RS20010 () | 4157592..4157813 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| HR070_RS20015 () | 4157882..4158358 | - | 477 | WP_001424026.1 | RadC family protein | - |
| HR070_RS20020 () | 4158374..4158847 | - | 474 | WP_000855059.1 | antirestriction protein | - |
| HR070_RS20025 () | 4159189..4160010 | - | 822 | WP_176324891.1 | DUF945 domain-containing protein | - |
| HR070_RS20030 () | 4160110..4160343 | - | 234 | WP_001213776.1 | DUF905 family protein | - |
| HR070_RS20035 () | 4160461..4160913 | - | 453 | WP_000682723.1 | hypothetical protein | - |
| HR070_RS20040 () | 4161348..4161977 | - | 630 | WP_000680181.1 | hypothetical protein | - |
| HR070_RS20045 () | 4162033..4162539 | - | 507 | WP_000238685.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|