MGE detailed information
MGE type: Genomic_island MGE length: 82968 bp
Accession: NZ_CP054232 Location: 3202427..3285394 Organism: Escherichia coli strain EcPF7 Replicon: chromosome
Accession: NZ_CP054232 Location: 3202427..3285394 Organism: Escherichia coli strain EcPF7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HR071_RS15350 () | 3199275..3199994 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| HR071_RS15355 () | 3199991..3201622 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| HR071_RS15360 () | 3201803..3202033 | + | 231 | WP_000371715.1 | (4Fe-4S)-binding protein | - |
| HR071_RS15365 () | 3202045..3202317 | + | 273 | WP_000405645.1 | N-acetyltransferase | - |
| HR071_RS15370 () | 3202427..3204964 | - | 2538 | WP_001296664.1 | fimbrial biogenesis outer membrane usher protein | - |
| HR071_RS15375 () | 3204997..3205689 | - | 693 | WP_000760483.1 | molecular chaperone | - |
| HR071_RS15380 () | 3205754..3206278 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| HR071_RS15385 () | 3206651..3210490 | + | 3840 | WP_059319597.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| HR071_RS15390 () | 3211388..3212218 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| HR071_RS15395 () | 3213372..3217301 | + | 3930 | WP_001080129.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| HR071_RS15400 () | 3217515..3217787 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| HR071_RS15405 () | 3218015..3218311 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| HR071_RS15410 () | 3218339..3218512 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| HR071_RS15415 () | 3218631..3220148 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| HR071_RS15420 () | 3220385..3221842 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| HR071_RS15425 () | 3221901..3224048 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| HR071_RS15430 () | 3224128..3225462 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| HR071_RS15435 () | 3225828..3227366 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| HR071_RS15440 () | 3228115..3228684 | - | 570 | WP_001560692.1 | DUF4942 domain-containing protein | - |
| HR071_RS15445 () | 3228781..3228978 | - | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| HR071_RS15450 () | 3228990..3229478 | - | 489 | WP_000777545.1 | hypothetical protein | - |
| HR071_RS15455 () | 3229475..3229849 | - | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| HR071_RS15460 () | 3229939..3230307 | - | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HR071_RS15465 () | 3230470..3230691 | - | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| HR071_RS15470 () | 3230754..3231230 | - | 477 | WP_001186786.1 | RadC family protein | - |
| HR071_RS15475 () | 3231246..3231731 | - | 486 | WP_000214398.1 | antirestriction protein | - |
| HR071_RS15480 () | 3231822..3232640 | - | 819 | WP_001773857.1 | DUF945 domain-containing protein | - |
| HR071_RS15485 () | 3232730..3232963 | - | 234 | WP_001278283.1 | DUF905 family protein | - |
| HR071_RS15490 () | 3232969..3233646 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| HR071_RS15495 () | 3233794..3234474 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| HR071_RS15500 () | 3234677..3235561 | - | 885 | WP_001116801.1 | 50S ribosome-binding GTPase | - |
| HR071_RS15505 () | 3235662..3236885 | + | 1224 | WP_021556275.1 | hypothetical protein | - |
| HR071_RS15510 () | 3238338..3239069 | + | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| HR071_RS15515 () | 3239416..3239991 | + | 576 | WP_032269762.1 | hypothetical protein | - |
| HR071_RS15520 () | 3240060..3240293 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| HR071_RS15525 () | 3240305..3240530 | + | 226 | Protein_3031 | hypothetical protein | - |
| HR071_RS15530 () | 3240592..3240858 | - | 267 | Protein_3032 | transposase | - |
| HR071_RS15535 () | 3240949..3242106 | + | 1158 | Protein_3033 | efflux RND transporter permease subunit | - |
| HR071_RS15540 () | 3242227..3242876 | + | 650 | Protein_3034 | TetR/AcrR family transcriptional regulator | - |
| HR071_RS15545 () | 3242848..3243193 | + | 346 | Protein_3035 | helix-turn-helix domain-containing protein | - |
| HR071_RS15550 () | 3243550..3244095 | - | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| HR071_RS15555 () | 3244140..3245291 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| HR071_RS15560 () | 3245420..3246475 | - | 1056 | WP_000494233.1 | propanediol utilization response regulator transcription factor GrpQ | - |
| HR071_RS15565 () | 3246492..3247721 | - | 1230 | WP_032269763.1 | propanediol utilization sensor histidine kinase GrpP | - |
| HR071_RS15570 () | 3248304..3248825 | - | 522 | WP_000237741.1 | maturase | - |
| HR071_RS15575 () | 3248853..3249392 | - | 540 | WP_001332064.1 | maturase | - |
| HR071_RS15580 () | 3249878..3250783 | - | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| HR071_RS15585 () | 3250920..3251837 | - | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| HR071_RS15590 () | 3251946..3254498 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| HR071_RS15595 () | 3254547..3255122 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| HR071_RS15600 () | 3255133..3255432 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| HR071_RS15605 () | 3255456..3256973 | - | 1518 | WP_000997839.1 | propanediol utilization system aldehyde dehydrogenase GrpJ | - |
| HR071_RS15610 () | 3257034..3257780 | - | 747 | WP_176316569.1 | propanediol utilization microcompartment protein GrpI | - |
| HR071_RS15615 () | 3257826..3258523 | - | 698 | Protein_3049 | IS1 family transposase | - |
| HR071_RS15620 () | 3258706..3259169 | + | 464 | Protein_3050 | DNA-binding protein | - |
| HR071_RS15625 () | 3259265..3259498 | + | 234 | WP_000124176.1 | hypothetical protein | - |
| HR071_RS15630 () | 3259551..3259742 | - | 192 | WP_001287878.1 | DUF4222 domain-containing protein | - |
| HR071_RS15635 () | 3260404..3260772 | + | 369 | WP_001350801.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| HR071_RS15640 () | 3260742..3261242 | + | 501 | WP_072145580.1 | type VI secretion protein ImpA | - |
| HR071_RS15645 () | 3261481..3262620 | + | 1140 | WP_113966943.1 | hypothetical protein | - |
| HR071_RS15650 () | 3262752..3264536 | + | 1785 | WP_000269403.1 | KAP family P-loop domain protein | - |
| HR071_RS15655 () | 3264536..3265288 | + | 753 | WP_000537317.1 | hypothetical protein | - |
| HR071_RS15660 () | 3265270..3266589 | + | 1320 | WP_000508958.1 | hypothetical protein | - |
| HR071_RS15665 () | 3266586..3267311 | + | 726 | WP_000020778.1 | TatD family hydrolase | - |
| HR071_RS15670 () | 3267864..3268439 | - | 576 | WP_001774140.1 | SLATT domain-containing protein | - |
| HR071_RS15675 () | 3268447..3269775 | - | 1329 | WP_000019624.1 | nucleotidyltransferase | - |
| HR071_RS15680 () | 3269910..3270095 | - | 186 | Protein_3062 | transposase domain-containing protein | - |
| HR071_RS15685 () | 3270116..3271272 | - | 1157 | Protein_3063 | IS3 family transposase | - |
| HR071_RS15690 () | 3271342..3271689 | - | 348 | WP_000477079.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| HR071_RS15695 () | 3272307..3273000 | - | 694 | Protein_3065 | IS1 family transposase | - |
| HR071_RS15700 () | 3273253..3274722 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| HR071_RS15705 () | 3274827..3277196 | + | 2370 | WP_000671169.1 | arginine decarboxylase | - |
| HR071_RS15710 () | 3277271..3278770 | + | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| HR071_RS15715 () | 3278913..3279610 | + | 698 | Protein_3069 | IS1 family transposase | - |
| HR071_RS15720 () | 3279627..3280418 | + | 792 | Protein_3070 | IS3 family transposase | - |
| HR071_RS15725 () | 3280585..3281136 | + | 552 | WP_001774069.1 | HTH-type transcriptional regulator PapX | - |
| HR071_RS15730 () | 3281603..3282300 | - | 698 | Protein_3072 | IS1 family transposase | - |
| HR071_RS15735 () | 3282830..3283873 | - | 1044 | WP_176316570.1 | tetratricopeptide repeat protein | - |
| HR071_RS15740 () | 3284129..3285394 | - | 1266 | WP_176316571.1 | integrase arm-type DNA-binding domain-containing protein | - |
| HR071_RS15750 () | 3285774..3286349 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| HR071_RS15755 () | 3286386..3288083 | - | 1698 | WP_000068941.1 | protein-disulfide reductase DsbD | - |
| HR071_RS15760 () | 3288059..3288397 | - | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| HR071_RS15765 () | 3288513..3289814 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|