MGE detailed information
MGE type: Mobilizable plasmid MGE length: 123935 bp
Accession: NZ_CP054225 Location: 1..123935 Organism: Escherichia coli strain EcPF16 Replicon: plasmid p1
Accession: NZ_CP054225 Location: 1..123935 Organism: Escherichia coli strain EcPF16 Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HR074_RS22895 () | 1..1011 | + | 1011 | WP_000200071.1 | RepB family plasmid replication initiator protein | - |
| HR074_RS22900 () | 1478..2458 | + | 981 | WP_176321124.1 | IS5 family transposase ISKpn26 | Transposase |
| HR074_RS22905 () | 2928..3668 | - | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
| HR074_RS22910 () | 4357..4710 | + | 354 | WP_001114073.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| HR074_RS22915 () | 4758..5120 | + | 363 | WP_000783215.1 | arsenite efflux transporter metallochaperone ArsD | - |
| HR074_RS22920 () | 5138..6889 | + | 1752 | WP_001556710.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| HR074_RS22925 () | 6938..8227 | + | 1290 | WP_003026002.1 | arsenite efflux transporter membrane subunit ArsB | - |
| HR074_RS22930 () | 8240..8665 | + | 426 | WP_000065759.1 | glutaredoxin-dependent arsenate reductase | - |
| HR074_RS22935 () | 8696..9100 | - | 405 | WP_004118313.1 | arsenic transporter ATPase | - |
| HR074_RS22940 () | 9109..9681 | - | 573 | WP_001556711.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HR074_RS22945 () | 9845..12853 | + | 3009 | WP_021570618.1 | Tn3 family transposase ISEc63 | Transposase |
| HR074_RS22950 () | 12886..13284 | - | 399 | Protein_11 | PLP-dependent transferase | - |
| HR074_RS22955 () | 13366..14643 | - | 1278 | WP_001515737.1 | serine dehydratase subunit alpha family protein | - |
| HR074_RS22960 () | 14991..15632 | - | 642 | WP_000948259.1 | membrane integrity-associated transporter subunit PqiC | - |
| HR074_RS22965 () | 15632..16570 | - | 939 | WP_000449980.1 | MCE family protein | - |
| HR074_RS22970 () | 16572..17363 | - | 792 | WP_001325019.1 | putative ribonucleotide transport ATP-binding protein mkl | VF |
| HR074_RS22975 () | 17369..18514 | - | 1146 | WP_001325018.1 | ABC transporter permease | - |
| HR074_RS22980 () | 18628..18879 | - | 252 | WP_001515736.1 | hypothetical protein | - |
| HR074_RS22985 () | 18938..19642 | + | 705 | WP_001067845.1 | IS6-like element IS26 family transposase | - |
| HR074_RS22990 () | 19695..20237 | + | 543 | Protein_19 | hypothetical protein | VF |
| HR074_RS22995 () | 20361..20999 | + | 639 | Protein_20 | Type IV secretion system protein VirB11 | VF |
| HR074_RS23000 () | 20999..21532 | + | 534 | WP_000792636.1 | Phospholipase D | VF |
| HR074_RS23005 () | 21705..22019 | - | 315 | WP_000091613.1 | hypothetical protein | - |
| HR074_RS23010 () | 22274..22630 | - | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| HR074_RS23015 () | 22620..23021 | - | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| HR074_RS23020 () | 23018..23308 | - | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| HR074_RS23025 () | 23467..23640 | + | 174 | Protein_26 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| HR074_RS23030 () | 23673..24128 | - | 456 | WP_001166628.1 | IS607 family transposase ISChh1 | Transposase |
| HR074_RS23035 () | 24200..24550 | + | 351 | WP_001294660.1 | mercuric transport protein MerT | - |
| HR074_RS23040 () | 24566..24841 | + | 276 | WP_000732276.1 | mercury resistance system periplasmic binding protein MerP | - |
| HR074_RS23045 () | 24869..25276 | + | 408 | WP_000522993.1 | organomercurial transporter MerC | - |
| HR074_RS23050 () | 25315..26997 | + | 1683 | WP_000281123.1 | mercury(II) reductase | - |
| HR074_RS23055 () | 27015..27380 | + | 366 | WP_001277463.1 | mercury resistance co-regulator MerD | - |
| HR074_RS23060 () | 27377..27613 | + | 237 | WP_001087807.1 | broad-spectrum mercury transporter MerE | - |
| HR074_RS23065 () | 27679..27891 | + | 213 | WP_000993245.1 | DUF3330 domain-containing protein | - |
| HR074_RS23070 () | 28021..28578 | + | 558 | WP_001162010.1 | recombinase family protein | - |
| HR074_RS23075 () | 28663..29367 | + | 705 | WP_023312637.1 | IS6-like element IS26 family transposase | - |
| HR074_RS23080 () | 29472..30701 | + | 1230 | WP_000286799.1 | EAL domain-containing protein | - |
| HR074_RS23085 () | 30828..31525 | - | 698 | Protein_38 | IS1 family transposase IS1R | Transposase |
| HR074_RS23090 () | 31582..31824 | + | 243 | Protein_39 | IS3 family transposase ISEc14 | Transposase |
| HR074_RS23095 () | 31985..33136 | + | 1152 | WP_001000602.1 | Na+/H+ antiporter NhaA | - |
| HR074_RS23100 () | 33329..34033 | + | 705 | Protein_41 | IS6-like element IS26 family transposase | - |
| HR074_RS23105 () | 34303..34470 | + | 168 | Protein_42 | recombinase family protein | - |
| HR074_RS23110 () | 34524..35228 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HR074_RS23115 () | 35287..35847 | + | 561 | WP_097340349.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HR074_RS23120 () | 35855..37246 | + | 1392 | WP_004098990.1 | SIR2 family protein | - |
| HR074_RS23125 () | 37243..39309 | + | 2067 | WP_004098991.1 | DUF87 domain-containing protein | - |
| HR074_RS23130 () | 39637..39927 | - | 291 | WP_139815317.1 | hypothetical protein | - |
| HR074_RS23135 () | 40178..42799 | + | 2622 | WP_016156502.1 | hypothetical protein | - |
| HR074_RS23140 () | 43166..45373 | - | 2208 | WP_016156503.1 | hypothetical protein | - |
| HR074_RS23145 () | 45500..45940 | - | 441 | WP_016156504.1 | hypothetical protein | - |
| HR074_RS23150 () | 46025..46348 | - | 324 | Protein_51 | IS3 family transposase ISBcen15 | Transposase |
| HR074_RS23155 () | 46373..46660 | - | 288 | Protein_52 | IS3 family transposase ISBcen15 | Transposase |
| HR074_RS23160 () | 46828..47524 | + | 697 | Protein_53 | IS1 family transposase IS1X2 | Transposase |
| HR074_RS23165 () | 47536..47601 | - | 66 | Protein_54 | galactoside O-acetyltransferase | - |
| HR074_RS23170 () | 47676..48920 | - | 1245 | WP_038877734.1 | lactose permease | - |
| HR074_RS23175 () | 48972..52046 | - | 3075 | WP_176321125.1 | beta-galactosidase | - |
| HR074_RS23180 () | 52168..53250 | - | 1083 | WP_024241646.1 | DNA-binding transcriptional repressor LacI | - |
| HR074_RS23185 () | 53607..54305 | - | 699 | Protein_58 | arsenical resistance protein ArsH | - |
| HR074_RS23190 () | 54391..54711 | + | 321 | WP_004206577.1 | transcriptional regulator | - |
| HR074_RS23195 () | 54756..56045 | + | 1290 | WP_007898880.1 | arsenic transporter | - |
| HR074_RS23200 () | 56058..56483 | + | 426 | WP_007898882.1 | glutaredoxin-dependent arsenate reductase | - |
| HR074_RS23205 () | 56664..57686 | + | 1023 | WP_021570628.1 | IS110 family transposase IS5708 | Transposase |
| HR074_RS23210 () | 58021..59025 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| HR074_RS23215 () | 59287..59565 | + | 279 | WP_004118253.1 | EAL domain-containing protein | - |
| HR074_RS23220 () | 59594..59821 | - | 228 | Protein_65 | IS66 family transposase | - |
| HR074_RS23225 () | 59896..60189 | - | 294 | WP_016156511.1 | IS66 family transposase ISSgsp1 | Transposase |
| HR074_RS23230 () | 60288..61055 | - | 768 | WP_004152282.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| HR074_RS23235 () | 61056..62012 | - | 957 | WP_004118246.1 | Fe(3+) dicitrate transport system permease protein FecD | VF |
| HR074_RS23240 () | 62009..63007 | - | 999 | WP_016156512.1 | Fe(3+) dicitrate transport system permease protein FecC | VF |
| HR074_RS23245 () | 63004..63906 | - | 903 | WP_016156513.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| HR074_RS23250 () | 63951..66275 | - | 2325 | WP_007898891.1 | Fe(3+) dicitrate transport protein FecA | - |
| HR074_RS23255 () | 66362..67315 | - | 954 | WP_004118237.1 | fec operon regulator FecR | - |
| HR074_RS23260 () | 67312..67833 | - | 522 | WP_016151347.1 | putative RNA polymerase sigma factor FecI | VF |
| HR074_RS23265 () | 68204..68899 | - | 696 | Protein_74 | IS1 family transposase | - |
| HR074_RS23270 () | 69007..69975 | + | 969 | WP_016156514.1 | IS5 family transposase IS903B | Transposase |
| HR074_RS23275 () | 70438..72747 | + | 2310 | WP_029404135.1 | TerB N-terminal domain-containing protein | - |
| HR074_RS23280 () | 72751..74067 | + | 1317 | WP_004152291.1 | ATP-binding protein | - |
| HR074_RS23285 () | 74064..76259 | + | 2196 | WP_000093087.1 | DEAD/DEAH box helicase | - |
| HR074_RS23290 () | 76813..78348 | - | 1536 | WP_001000406.1 | IS66 family transposase ISSgsp1 | Transposase |
| HR074_RS23295 () | 78398..78745 | - | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| HR074_RS23300 () | 78742..79125 | - | 384 | WP_001201739.1 | IS66 family transposase IS682 | Transposase |
| HR074_RS23305 () | 79913..80373 | - | 461 | Protein_82 | IS1 family transposase IS1X4 | Transposase |
| HR074_RS23310 () | 80642..81397 | - | 756 | WP_000807690.1 | replication initiation protein RepE | - |
| HR074_RS23315 () | 81931..82029 | + | 99 | Protein_84 | IS1 family transposase | - |
| HR074_RS23320 () | 82316..83338 | - | 1023 | WP_016156516.1 | IS110 family transposase IS1618 | Transposase |
| HR074_RS23325 () | 83521..84537 | + | 1017 | WP_077769566.1 | IS5 family transposase ISKpn26 | Transposase |
| HR074_RS23330 () | 84686..86290 | - | 1605 | Protein_87 | diguanylate cyclase | - |
| HR074_RS23335 () | 86321..87441 | - | 1121 | Protein_88 | IS3-like element ISSen4 family transposase | - |
| HR074_RS23340 () | 87733..88119 | + | 387 | WP_101430433.1 | hypothetical protein | - |
| HR074_RS23345 () | 88369..88590 | - | 222 | WP_001124949.1 | hypothetical protein | - |
| HR074_RS23350 () | 88802..89118 | + | 317 | Protein_91 | DUF4113 domain-containing protein | - |
| HR074_RS23355 () | 89165..89947 | - | 783 | WP_016156521.1 | DsbA family protein | - |
| HR074_RS23360 () | 90079..90522 | + | 444 | Protein_93 | hypothetical protein | - |
| HR074_RS23365 () | 90578..91275 | + | 698 | Protein_94 | IS1 family transposase IS1G | Transposase |
| HR074_RS23370 () | 91386..92186 | - | 801 | WP_001515712.1 | hypothetical protein | - |
| HR074_RS23375 () | 92944..93429 | + | 486 | WP_000045622.1 | hypothetical protein | - |
| HR074_RS23380 () | 93426..93743 | + | 318 | Protein_97 | hypothetical protein | - |
| HR074_RS23385 () | 93892..94872 | - | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| HR074_RS23390 () | 95105..95239 | + | 135 | Protein_99 | recombinase family protein | - |
| HR074_RS23395 () | 95301..95513 | + | 213 | Protein_100 | IS6 family transposase IS15DII | Transposase |
| HR074_RS23400 () | 95579..96207 | + | 629 | Protein_101 | IS3 family transposase ISEc36 | Transposase |
| HR074_RS23405 () | 96467..96697 | + | 231 | Protein_102 | IS3 family transposase ISEc27 | Transposase |
| HR074_RS23410 () | 96757..97496 | + | 740 | Protein_103 | IS3 family transposase IS629 | Transposase |
| HR074_RS23415 () | 98169..99677 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| HR074_RS23420 () | 99767..100240 | + | 474 | Protein_105 | IS3 family transposase IS629 | Transposase |
| HR074_RS23425 () | 100285..100761 | - | 477 | Protein_106 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| HR074_RS23430 () | 100814..101518 | - | 705 | WP_009364894.1 | IS6-like element IS26 family transposase | - |
| HR074_RS23435 () | 101620..102039 | - | 420 | WP_000990392.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| HR074_RS23440 () | 102036..102347 | - | 312 | WP_176321126.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| HR074_RS23445 () | 102577..105468 | - | 2892 | Protein_110 | Tn3 family transposase ISEc63 | Transposase |
| HR074_RS23450 () | 105522..106226 | - | 705 | WP_009364894.1 | IS6-like element IS26 family transposase | - |
| HR074_RS23455 () | 106217..106405 | + | 189 | WP_176321123.1 | hypothetical protein | - |
| HR074_RS23460 () | 106423..108651 | - | 2229 | WP_047400458.1 | Mov34/MPN/PAD-1 family protein | - |
| HR074_RS23465 () | 108648..109829 | - | 1182 | WP_047400456.1 | hypothetical protein | - |
| HR074_RS23470 () | 109966..110826 | + | 861 | WP_008324213.1 | WYL domain-containing protein | - |
| HR074_RS23475 () | 110834..111352 | + | 519 | WP_047400454.1 | hypothetical protein | - |
| HR074_RS23480 () | 111391..113601 | - | 2211 | WP_075594652.1 | tyrosine-type recombinase/integrase | - |
| HR074_RS23485 () | 113585..114592 | - | 1008 | WP_008325196.1 | Tyrosine recombinase XerC | VF |
| HR074_RS23490 () | 114654..115796 | + | 1143 | Protein_119 | translesion error-prone DNA polymerase V subunit UmuC | - |
| HR074_RS23495 () | 115875..116126 | + | 252 | WP_004118488.1 | plasmid stabilization protein | - |
| HR074_RS23500 () | 116180..116485 | + | 306 | WP_016156495.1 | hypothetical protein | - |
| HR074_RS23505 () | 117596..118567 | - | 972 | WP_016156498.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HR074_RS23510 () | 118567..119733 | - | 1167 | WP_000523813.1 | Sporulation initiation inhibitor protein Soj | VF |
| HR074_RS23515 () | 120130..120866 | + | 737 | Protein_124 | IS3 family transposase IS629 | Transposase |
| HR074_RS23520 () | 121539..123047 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| HR074_RS23525 () | 123137..123610 | + | 474 | Protein_126 | IS3 family transposase ISEc25 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|