MGE detailed information
MGE type: Prophage MGE length: 19372 bp
Accession: NZ_CP054224 Location: 3583719..3603090 Organism: Escherichia coli strain EcPF16 Replicon: chromosome
Accession: NZ_CP054224 Location: 3583719..3603090 Organism: Escherichia coli strain EcPF16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HR074_RS17280 () | 3579697..3580848 | + | 1152 | WP_000323729.1 | trypsin-like peptidase domain-containing protein | - |
| HR074_RS17285 () | 3581073..3581642 | - | 570 | Protein_3385 | IS5 family transposase | - |
| HR074_RS17290 () | 3581638..3582332 | - | 695 | Protein_3386 | WYL domain-containing protein | - |
| HR074_RS17295 () | 3582764..3583627 | + | 864 | WP_032238618.1 | GTPase family protein | - |
| HR074_RS17300 () | 3583719..3584540 | + | 822 | WP_000197387.1 | DUF945 domain-containing protein | - |
| HR074_RS17305 () | 3584757..3585458 | + | 702 | WP_176321062.1 | WYL domain-containing protein | - |
| HR074_RS17310 () | 3585499..3585735 | + | 237 | WP_001144031.1 | hypothetical protein | - |
| HR074_RS17315 () | 3585735..3586178 | + | 444 | WP_000649865.1 | hypothetical protein | - |
| HR074_RS17320 () | 3586201..3586668 | + | 468 | WP_032238643.1 | hypothetical protein | - |
| HR074_RS17330 () | 3588185..3588430 | + | 246 | WP_176321063.1 | DUF905 domain-containing protein | - |
| HR074_RS17335 () | 3588528..3588986 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| HR074_RS17340 () | 3589002..3589478 | + | 477 | WP_000811693.1 | RadC family protein | - |
| HR074_RS17345 () | 3589487..3589708 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| HR074_RS17350 () | 3589727..3590044 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| HR074_RS17355 () | 3590065..3590406 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| HR074_RS17360 () | 3591072..3591281 | + | 210 | Protein_3400 | IS3 family transposase ISEc48 | Transposase |
| HR074_RS17365 () | 3591323..3592066 | - | 744 | WP_032238641.1 | AraC family transcriptional regulator | - |
| HR074_RS17370 () | 3592454..3593365 | - | 912 | WP_073527469.1 | IS5 family transposase ISKpn26 | Transposase |
| HR074_RS17375 () | 3593718..3594782 | + | 1065 | WP_072003692.1 | hypothetical protein | VF |
| HR074_RS17380 () | 3594814..3595179 | - | 366 | WP_176321064.1 | tail fiber assembly protein | - |
| HR074_RS17385 () | 3595848..3595946 | - | 99 | Protein_3405 | carbohydrate kinase | - |
| HR074_RS17390 () | 3595949..3596260 | - | 312 | Protein_3406 | glycoside hydrolase family protein | - |
| HR074_RS17395 () | 3596247..3596552 | - | 306 | WP_000544528.1 | phage holin family protein | - |
| HR074_RS17400 () | 3596873..3597562 | - | 690 | WP_039022184.1 | antitermination protein | - |
| HR074_RS17405 () | 3597608..3598393 | - | 786 | Protein_3409 | hypothetical protein | - |
| HR074_RS17410 () | 3598585..3598881 | + | 297 | WP_000564503.1 | hypothetical protein | - |
| HR074_RS17415 () | 3599038..3599418 | + | 381 | WP_126325741.1 | hypothetical protein | - |
| HR074_RS17420 () | 3599415..3599723 | + | 309 | WP_063154656.1 | host cell division inhibitory peptide Kil | - |
| HR074_RS17425 () | 3599723..3599983 | + | 261 | WP_176321065.1 | hypothetical protein | - |
| HR074_RS17430 () | 3600058..3600954 | + | 897 | Protein_3414 | hypothetical protein | - |
| HR074_RS17435 () | 3601043..3601456 | + | 414 | WP_176320978.1 | hypothetical protein | - |
| HR074_RS17440 () | 3601459..3601677 | + | 219 | WP_085451699.1 | TraR/DksA family transcriptional regulator | - |
| HR074_RS17445 () | 3601927..3603090 | + | 1164 | WP_021242885.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| HR074_RS17455 () | 3603295..3604548 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| HR074_RS17460 () | 3604560..3605663 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| HR074_RS17465 () | 3605951..3607006 | + | 1056 | WP_176321066.1 | phosphoporin PhoE | - |
| HR074_RS17470 () | 3607045..3607446 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|