MGE detailed information
MGE type: Conjugative plasmid MGE length: 86740 bp
Accession: NZ_CP054221 Location: 1..86740 Organism: Escherichia coli strain EcPF18 Replicon: plasmid p2
Accession: NZ_CP054221 Location: 1..86740 Organism: Escherichia coli strain EcPF18 Replicon: plasmid p2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HR075_RS24965 () | 1..1032 | + | 1032 | WP_176305159.1 | replication initiation protein | - |
| HR075_RS24970 () | 2101..2610 | - | 510 | WP_000045394.1 | hypothetical protein | - |
| HR075_RS24975 () | 2666..3268 | - | 603 | WP_000517692.1 | hypothetical protein | - |
| HR075_RS24980 () | 3622..4968 | + | 1347 | WP_001132033.1 | hypothetical protein | - |
| HR075_RS24985 () | 5247..7127 | + | 1881 | WP_176305160.1 | colicin | - |
| HR075_RS24990 () | 7149..7484 | - | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| HR075_RS24995 () | 7613..7960 | + | 348 | WP_000142451.1 | hypothetical protein | - |
| HR075_RS25000 () | 7980..8570 | - | 591 | WP_000194576.1 | hypothetical protein | - |
| HR075_RS25005 () | 8570..8827 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| HR075_RS25010 () | 9395..9808 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| HR075_RS25015 () | 9810..10589 | + | 780 | WP_001164201.1 | site-specific integrase | - |
| HR075_RS25020 () | 10769..11413 | + | 645 | WP_001144036.1 | ParA family protein | - |
| HR075_RS25025 () | 11500..11808 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| HR075_RS25030 () | 12222..13202 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| HR075_RS25035 () | 13195..13611 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| HR075_RS25040 () | 13613..14887 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| HR075_RS25045 () | 14887..15324 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HR075_RS25050 () | 15321..15569 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| HR075_RS25055 () | 15987..16889 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| HR075_RS25060 () | 16886..17197 | + | 312 | WP_031942433.1 | hypothetical protein | - |
| HR075_RS25065 () | 17273..17956 | + | 684 | WP_000086147.1 | DNA methylase | - |
| HR075_RS25070 () | 17957..18178 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| HR075_RS25075 () | 18192..18626 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| HR075_RS25080 () | 18672..19448 | + | 777 | WP_001005023.1 | hypothetical protein | - |
| HR075_RS25085 () | 19983..20285 | + | 303 | WP_072275141.1 | antirestriction protein | - |
| HR075_RS25090 () | 20332..20754 | + | 423 | WP_000271744.1 | DUF1380 family protein | - |
| HR075_RS25095 () | 20751..20942 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| HR075_RS25100 () | 21013..21327 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| HR075_RS25105 () | 21711..22238 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| HR075_RS25110 () | 22296..22529 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| HR075_RS25115 () | 22588..24546 | + | 1959 | WP_001145483.1 | ParB/RepB/Spo0J family partition protein | - |
| HR075_RS25120 () | 24601..25035 | + | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| HR075_RS25125 () | 25032..25751 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| HR075_RS25130 () | 25748..26344 | + | 597 | WP_176305161.1 | hypothetical protein | - |
| HR075_RS25135 () | 26806..27306 | + | 501 | WP_000117612.1 | antirestriction protein ArdA | - |
| HR075_RS25140 () | 28035..28469 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| HR075_RS25145 () | 28563..28829 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| HR075_RS25150 () | 28894..29832 | + | 939 | WP_000038336.1 | Recombination-promoting nuclease RpnA | VF |
| HR075_RS25155 () | 29832..30077 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| HR075_RS25160 () | 30108..30359 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| HR075_RS25165 () | 30393..30590 | - | 198 | WP_001161115.1 | hypothetical protein | - |
| HR075_RS25170 () | 30939..31787 | + | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| HR075_RS25175 () | 31873..32208 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| HR075_RS25180 () | 32442..32774 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| HR075_RS25185 () | 32785..35484 | + | 2700 | WP_001405892.1 | Protein TraI | Relaxase |
| HR075_RS25190 () | 35521..37812 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| HR075_RS25195 () | 37805..38875 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| HR075_RS25200 () | 38894..40102 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 40266..40323 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 40266..40323 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 40266..40323 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 40266..40323 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| HR075_RS25205 () | 40378..40530 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| HR075_RS25210 () | 40602..40853 | - | 252 | WP_176305162.1 | hypothetical protein | - |
| HR075_RS25215 () | 41512..41688 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| HR075_RS25220 () | 42080..42289 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| HR075_RS25225 () | 42361..43011 | - | 651 | WP_001178507.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HR075_RS25230 () | 43085..45253 | - | 2169 | WP_000698358.1 | DotA/TraY family protein | - |
| HR075_RS25235 () | 45350..45934 | - | 585 | WP_001037982.1 | IncI1-type conjugal transfer protein TraX | - |
| HR075_RS25240 () | 45963..47165 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| HR075_RS25245 () | 47132..47746 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| HR075_RS25250 () | 47746..50790 | - | 3045 | WP_001024782.1 | IncI1-type conjugal transfer protein TraU | - |
| HR075_RS25255 () | 50880..51680 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| HR075_RS25260 () | 51664..51852 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| HR075_RS25265 () | 51916..52320 | - | 405 | WP_000086959.1 | IncI1-type conjugal transfer protein TraR | - |
| HR075_RS25270 () | 52371..52898 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| HR075_RS25275 () | 52898..53602 | - | 705 | WP_000801919.1 | IncI1-type conjugal transfer protein TraP | - |
| HR075_RS25280 () | 53602..54891 | - | 1290 | WP_001272000.1 | conjugal transfer protein TraO | - |
| HR075_RS25285 () | 54894..55877 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| HR075_RS25290 () | 55888..56580 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| HR075_RS25295 () | 56577..56924 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| HR075_RS25300 () | 56942..60709 | - | 3768 | WP_001141526.1 | hypothetical protein | - |
| HR075_RS25305 () | 60799..61350 | - | 552 | WP_176305163.1 | Phospholipase D | VF |
| HR075_RS25310 () | 61365..61655 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| HR075_RS25315 () | 61652..62800 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| HR075_RS25320 () | 62797..63615 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| HR075_RS25325 () | 63612..64070 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| HR075_RS25330 () | 64465..65049 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| HR075_RS25335 () | 65109..66311 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| HR075_RS25340 () | 66396..67220 | - | 825 | WP_001238939.1 | hypothetical protein | - |
| HR075_RS25345 () | 67371..68525 | - | 1155 | WP_001139957.1 | integrase | - |
| HR075_RS25350 () | 69010..69150 | - | 141 | WP_176305164.1 | hypothetical protein | - |
| HR075_RS25355 () | 69214..69432 | - | 219 | WP_071527775.1 | shufflon protein D' | - |
| HR075_RS25360 () | 69815..70045 | - | 231 | WP_176305165.1 | hypothetical protein | - |
| HR075_RS25365 () | 70599..71699 | - | 1101 | Protein_80 | hypothetical protein | VF |
| HR075_RS25370 () | 71699..72355 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| HR075_RS25375 () | 72340..72900 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| HR075_RS25380 () | 72910..73524 | - | 615 | WP_000959786.1 | hypothetical protein | VF |
| HR075_RS25385 () | 73542..74639 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HR075_RS25390 () | 74652..76205 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| HR075_RS25395 () | 76216..76668 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| HR075_RS25400 () | 76655..77950 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| HR075_RS25405 () | 77943..79625 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| HR075_RS25410 () | 79639..80076 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| HR075_RS25415 () | 80076..81143 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| HR075_RS25420 () | 81767..82063 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| HR075_RS25425 () | 82248..82502 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| HR075_RS25430 () | 82664..83215 | - | 552 | WP_176305166.1 | hypothetical protein | - |
| HR075_RS25435 () | 83388..84071 | - | 684 | WP_000213858.1 | hypothetical protein | - |
| HR075_RS25440 () | 84325..84858 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| HR075_RS25445 () | 85300..85587 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| HR075_RS25450 () | 85505..85768 | - | 264 | WP_001387472.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|