MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 89178 bp
Accession: NZ_CP054215 Location: 1..89178 Organism: Escherichia coli strain EcPF40 Replicon: plasmid p1
Accession: NZ_CP054215 Location: 1..89178 Organism: Escherichia coli strain EcPF40 Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HR076_RS24305 () | 1..978 | + | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| HR076_RS24310 () | 1221..1961 | - | 741 | WP_001066952.1 | tyrosine-type recombinase/integrase | - |
| HR076_RS24315 () | 2082..2270 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| HR076_RS24320 () | 2637..3806 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| HR076_RS24325 () | 4032..4207 | - | 176 | Protein_4 | IS3 family transposase | - |
| HR076_RS24330 () | 4653..4925 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| HR076_RS24335 () | 5450..5886 | - | 437 | Protein_6 | IS3 family transposase IS2 | Transposase |
| HR076_RS24340 () | 6168..8138 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| HR076_RS24345 () | 8145..8936 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| HR076_RS24350 () | 8999..9607 | - | 609 | Protein_9 | IS66 family transposase ISEc22 | Transposase |
| HR076_RS24355 () | 9675..10454 | - | 780 | WP_001323403.1 | IS21 family transposase IS100kyp | Transposase |
| HR076_RS24360 () | 10454..11476 | - | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| HR076_RS24365 () | 11562..12507 | - | 946 | Protein_12 | IS66 family transposase ISEc8 | Transposase |
| HR076_RS24370 () | 12556..12903 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| HR076_RS24375 () | 12900..13304 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| HR076_RS24380 () | 13333..13716 | - | 384 | Protein_15 | IS3 family transposase IS629 | Transposase |
| HR076_RS24385 () | 13806..15029 | - | 1224 | Protein_16 | group II intron reverse transcriptase/maturase | - |
| HR076_RS24390 () | 15096..15269 | + | 174 | Protein_17 | transposase | - |
| HR076_RS24395 () | 15419..16052 | - | 634 | Protein_18 | histidine-type phosphatase | - |
| HR076_RS24400 () | 16174..16659 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| HR076_RS24405 () | 16684..17169 | - | 486 | WP_001267176.1 | TlpA family protein disulfide reductase | - |
| HR076_RS24410 () | 17156..17851 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| HR076_RS24415 () | 17856..18986 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| HR076_RS24420 () | 18976..20259 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| HR076_RS24425 () | 20262..21641 | - | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| HR076_RS24430 () | 21745..22272 | - | 528 | WP_000178050.1 | iron transporter | - |
| HR076_RS24435 () | 22313..24199 | - | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| HR076_RS24440 () | 24546..25361 | - | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| HR076_RS24445 () | 25544..26050 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| HR076_RS24450 () | 26040..26198 | - | 159 | WP_000449408.1 | DsbA family protein | - |
| HR076_RS24455 () | 26661..27268 | + | 608 | Protein_30 | IS1 family transposase | - |
| HR076_RS24460 () | 27322..28026 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HR076_RS24465 () | 28090..28428 | + | 339 | Protein_32 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HR076_RS24470 () | 28611..29471 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| HR076_RS24475 () | 29621..29899 | + | 279 | Protein_34 | IS91 family transposase | - |
| HR076_RS24480 () | 30069..30773 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HR076_RS24485 () | 30834..31670 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| HR076_RS24490 () | 31670..32473 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| HR076_RS24495 () | 32534..33349 | - | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| HR076_RS24500 () | 33657..34508 | - | 852 | WP_000240536.1 | replication protein | - |
| HR076_RS24505 () | 34495..35214 | - | 720 | Protein_40 | AAA family ATPase | - |
| HR076_RS24510 () | 35264..35968 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HR076_RS24515 () | 36033..36128 | + | 96 | Protein_42 | IS1 family transposase | - |
| HR076_RS24520 () | 36143..37306 | + | 1164 | Protein_43 | IS4 family transposase IS10R | Transposase |
| HR076_RS24525 () | 37322..37732 | - | 411 | Protein_44 | Transposon Tn10 TetD protein | VF |
| HR076_RS24530 () | 37820..38413 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| HR076_RS24535 () | 38526..39731 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| HR076_RS24540 () | 39813..40436 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| HR076_RS24545 () | 40414..40506 | - | 93 | Protein_48 | ArsR family transcriptional regulator | - |
| HR076_RS24550 () | 40557..41254 | + | 698 | Protein_49 | IS1 family transposase IS1R | Transposase |
| HR076_RS24555 () | 41304..41777 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| HR076_RS24560 () | 41935..42948 | + | 1014 | WP_000845046.1 | IS91 family transposase ISAzo26 | Transposase |
| HR076_RS24565 () | 43151..43501 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| HR076_RS24570 () | 43627..44187 | + | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| HR076_RS24575 () | 44190..47156 | + | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| HR076_RS24580 () | 47451..48155 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HR076_RS24585 () | 48220..49470 | - | 1251 | Protein_56 | transposase | - |
| HR076_RS24590 () | 49545..50213 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| HR076_RS24595 () | 50249..50485 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| HR076_RS24600 () | 50482..50844 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| HR076_RS24605 () | 50862..52556 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| HR076_RS24610 () | 52608..53030 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| HR076_RS24615 () | 53066..53341 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| HR076_RS24620 () | 53355..53705 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| HR076_RS24625 () | 53777..54211 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| HR076_RS24630 () | 54318..55015 | - | 698 | Protein_65 | IS1 family transposase IS1R | Transposase |
| HR076_RS24635 () | 55264..55665 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HR076_RS24640 () | 55598..55855 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HR076_RS24645 () | 55948..56601 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| HR076_RS24650 () | 57064..57603 | - | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| HR076_RS24655 () | 58246..58452 | - | 207 | WP_001774176.1 | hypothetical protein | - |
| HR076_RS24660 () | 58478..59041 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| HR076_RS24665 () | 59089..60449 | - | 1361 | Protein_72 | DUF3560 domain-containing protein | - |
| HR076_RS24670 () | 60501..60731 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| HR076_RS24675 () | 61766..61957 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| HR076_RS24680 () | 61954..62376 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| HR076_RS24685 () | 62423..62725 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| HR076_RS24690 () | 63265..64041 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| HR076_RS24695 () | 64092..64526 | - | 435 | WP_000274437.1 | DUF1380 family protein | - |
| HR076_RS24700 () | 64540..64761 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| HR076_RS24705 () | 64762..65445 | - | 684 | WP_000086185.1 | DNA methylase | - |
| HR076_RS24710 () | 65522..65826 | - | 305 | Protein_81 | hypothetical protein | - |
| HR076_RS24715 () | 65830..66732 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| HR076_RS24720 () | 67599..68570 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HR076_RS24725 () | 68570..69736 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| HR076_RS24730 () | 70324..71079 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| HR076_RS24735 () | 71853..72659 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| HR076_RS24740 () | 72660..72965 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HR076_RS24745 () | 72967..73185 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HR076_RS24750 () | 73752..74264 | + | 513 | WP_000151784.1 | hypothetical protein | - |
| HR076_RS24755 () | 74298..75431 | - | 1134 | WP_001542067.1 | DUF3800 domain-containing protein | - |
| HR076_RS24760 () | 75598..76371 | - | 774 | WP_000905949.1 | hypothetical protein | - |
| HR076_RS24765 () | 76384..76884 | - | 501 | WP_001773886.1 | hypothetical protein | - |
| HR076_RS24770 () | 77149..77379 | + | 231 | WP_001261278.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| HR076_RS24775 () | 77376..77792 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HR076_RS24780 () | 77837..81631 | - | 3795 | WP_001144732.1 | hypothetical protein | - |
| HR076_RS24785 () | 82012..82242 | + | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| HR076_RS24790 () | 82239..82655 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HR076_RS24795 () | 82730..84295 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| HR076_RS24800 () | 84280..85302 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| HR076_RS24805 () | 85556..86253 | - | 698 | Protein_100 | IS1 family transposase IS1A | Transposase |
| HR076_RS24810 () | 86556..87253 | + | 698 | Protein_101 | IS1 family transposase IS1A | Transposase |
| HR076_RS24815 () | 87433..87946 | - | 514 | Protein_102 | DUF4113 domain-containing protein | - |
| HR076_RS24820 () | 88007..88111 | - | 105 | Protein_103 | AAA family ATPase | - |
| HR076_RS24825 () | 88113..88436 | - | 324 | Protein_104 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|