MGE detailed information
MGE type: Prophage MGE length: 57109 bp
Accession: NZ_CP054198 Location: 1197548..1254656 Organism: Glaesserella parasuis strain YHP170504 Replicon: chromosome
Accession: NZ_CP054198 Location: 1197548..1254656 Organism: Glaesserella parasuis strain YHP170504 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HQ939_RS06020 () | 1193478..1194392 | - | 915 | WP_010786955.1 | DMT family transporter | - |
| HQ939_RS06025 () | 1194464..1195651 | + | 1188 | WP_075621218.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| HQ939_RS06030 () | 1195715..1196596 | - | 882 | WP_021116899.1 | N-acetylneuraminate lyase | - |
| HQ939_RS06035 () | 1196680..1197546 | - | 867 | WP_021109517.1 | MurR/RpiR family transcriptional regulator | - |
| HQ939_RS06040 () | 1197548..1198018 | - | 471 | WP_016527934.1 | YhcH/YjgK/YiaL family protein | - |
| HQ939_RS06045 () | 1198346..1198621 | - | 276 | WP_042905847.1 | hypothetical protein | - |
| HQ939_RS06050 () | 1199184..1199480 | - | 297 | WP_035491741.1 | hypothetical protein | - |
| HQ939_RS06055 () | 1199558..1204882 | - | 5325 | WP_173632049.1 | DUF1983 domain-containing protein | - |
| HQ939_RS06060 () | 1205001..1205825 | - | 825 | WP_075592529.1 | phage antirepressor N-terminal domain-containing protein | - |
| HQ939_RS06065 () | 1205870..1206037 | + | 168 | WP_021118892.1 | hypothetical protein | - |
| HQ939_RS06070 () | 1206620..1207138 | - | 519 | WP_012621823.1 | tail assembly protein | - |
| HQ939_RS06075 () | 1207168..1207920 | - | 753 | WP_173632050.1 | C40 family peptidase | - |
| HQ939_RS06080 () | 1207922..1208659 | - | 738 | WP_021118486.1 | phage minor tail protein L | - |
| HQ939_RS06085 () | 1208927..1209448 | - | 522 | WP_075592533.1 | Rha family transcriptional regulator | - |
| HQ939_RS06090 () | 1209526..1209858 | - | 333 | WP_075606003.1 | phage tail protein | - |
| HQ939_RS06095 () | 1209903..1213466 | - | 3564 | WP_173632051.1 | tape measure protein | - |
| HQ939_RS06100 () | 1213528..1213794 | - | 267 | WP_075606005.1 | hypothetical protein | - |
| HQ939_RS06105 () | 1213894..1214073 | - | 180 | WP_075606006.1 | hypothetical protein | - |
| HQ939_RS06110 () | 1214149..1214376 | - | 228 | WP_075606007.1 | DUF4035 domain-containing protein | - |
| HQ939_RS06115 () | 1214421..1214822 | - | 402 | WP_075606008.1 | hypothetical protein | - |
| HQ939_RS06120 () | 1215091..1215756 | - | 666 | WP_075606009.1 | hypothetical protein | - |
| HQ939_RS06125 () | 1215759..1216178 | - | 420 | WP_075606010.1 | phage tail protein | - |
| HQ939_RS06130 () | 1216178..1216711 | - | 534 | WP_075606011.1 | phage tail protein | - |
| HQ939_RS06135 () | 1216715..1217017 | - | 303 | WP_075606012.1 | phage tail protein | - |
| HQ939_RS06140 () | 1217010..1217336 | - | 327 | WP_021110719.1 | DUF2190 family protein | - |
| HQ939_RS06145 () | 1217436..1219403 | - | 1968 | WP_075606013.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| HQ939_RS06150 () | 1219414..1219581 | - | 168 | WP_160433244.1 | photosystem I reaction center subunit PsaK | - |
| HQ939_RS06155 () | 1219658..1221151 | - | 1494 | WP_160442000.1 | phage portal protein | - |
| HQ939_RS06160 () | 1221152..1221373 | - | 222 | WP_005714374.1 | hypothetical protein | - |
| HQ939_RS06165 () | 1221512..1222138 | - | 627 | WP_173632052.1 | KilA-N domain-containing protein | - |
| HQ939_RS06170 () | 1222397..1222924 | - | 528 | WP_173632053.1 | Rha family transcriptional regulator | - |
| HQ939_RS06175 () | 1223045..1225180 | - | 2136 | WP_160442001.1 | phage terminase large subunit family protein | - |
| HQ939_RS06180 () | 1225180..1225647 | - | 468 | WP_005714379.1 | DUF1441 family protein | - |
| HQ939_RS06185 () | 1225962..1226246 | - | 285 | WP_075593094.1 | hypothetical protein | - |
| HQ939_RS06190 () | 1226140..1226484 | - | 345 | WP_021110725.1 | DUF2570 family protein | - |
| HQ939_RS06195 () | 1226457..1227002 | - | 546 | WP_021116913.1 | lysozyme | - |
| HQ939_RS06200 () | 1226977..1227276 | - | 300 | WP_021116914.1 | hypothetical protein | - |
| HQ939_RS06205 () | 1227388..1227837 | + | 450 | WP_042905676.1 | hypothetical protein | - |
| HQ939_RS06210 () | 1227800..1227994 | - | 195 | WP_021110729.1 | hypothetical protein | - |
| HQ939_RS06215 () | 1228194..1229018 | - | 825 | WP_021116916.1 | phage antirepressor N-terminal domain-containing protein | - |
| HQ939_RS06220 () | 1229333..1229500 | - | 168 | WP_021110921.1 | hypothetical protein | - |
| HQ939_RS06225 () | 1229797..1230015 | + | 219 | WP_021116917.1 | hypothetical protein | - |
| HQ939_RS06230 () | 1230068..1230886 | - | 819 | WP_043895698.1 | damage-inducible protein D | - |
| HQ939_RS06235 () | 1231251..1231436 | + | 186 | WP_021116919.1 | hypothetical protein | - |
| HQ939_RS06240 () | 1231445..1231822 | - | 378 | WP_021116920.1 | hypothetical protein | - |
| HQ939_RS06245 () | 1231819..1232223 | - | 405 | WP_021116921.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HQ939_RS06250 () | 1232220..1232510 | - | 291 | WP_021110734.1 | DUF1364 domain-containing protein | - |
| HQ939_RS06255 () | 1232603..1232785 | + | 183 | WP_005714427.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| HQ939_RS06260 () | 1232824..1233231 | + | 408 | WP_021110735.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| HQ939_RS06265 () | 1233265..1233693 | - | 429 | WP_021110736.1 | recombination protein NinB | - |
| HQ939_RS06270 () | 1233792..1233989 | - | 198 | Protein_1164 | hypothetical protein | - |
| HQ939_RS06275 () | 1234012..1234683 | - | 672 | WP_173632054.1 | holin | - |
| HQ939_RS06280 () | 1234683..1235468 | - | 786 | WP_021110739.1 | replication protein | - |
| HQ939_RS06285 () | 1235465..1236100 | - | 636 | WP_052316815.1 | phage regulatory protein/antirepressor Ant | - |
| HQ939_RS06290 () | 1236196..1236471 | - | 276 | WP_021116926.1 | hypothetical protein | - |
| HQ939_RS06295 () | 1236492..1236698 | - | 207 | WP_012621794.1 | helix-turn-helix transcriptional regulator | - |
| HQ939_RS06300 () | 1236834..1237487 | + | 654 | WP_021110742.1 | LexA family transcriptional regulator | - |
| HQ939_RS06305 () | 1237562..1238635 | + | 1074 | WP_021110743.1 | hypothetical protein | - |
| HQ939_RS06310 () | 1238649..1238984 | + | 336 | WP_075606019.1 | DUF4325 domain-containing protein | - |
| HQ939_RS06315 () | 1238974..1239399 | + | 426 | WP_075606020.1 | hypothetical protein | - |
| HQ939_RS06320 () | 1239491..1240087 | - | 597 | WP_075606021.1 | hypothetical protein | - |
| HQ939_RS06325 () | 1240776..1241417 | + | 642 | WP_042905667.1 | DUF3560 domain-containing protein | - |
| HQ939_RS06330 () | 1241473..1241793 | + | 321 | WP_021110750.1 | hypothetical protein | - |
| HQ939_RS06335 () | 1241790..1242011 | + | 222 | WP_021110751.1 | hypothetical protein | - |
| HQ939_RS06340 () | 1241998..1242204 | + | 207 | WP_021110752.1 | hypothetical protein | - |
| HQ939_RS06345 () | 1242284..1242760 | + | 477 | WP_021110753.1 | siphovirus Gp157 family protein | - |
| HQ939_RS06350 () | 1242924..1243949 | + | 1026 | WP_021110754.1 | hypothetical protein | - |
| HQ939_RS06355 () | 1244054..1244710 | + | 657 | WP_075606022.1 | AAA family ATPase | - |
| HQ939_RS06360 () | 1244712..1245350 | + | 639 | WP_075606023.1 | hypothetical protein | - |
| HQ939_RS06365 () | 1245417..1245605 | - | 189 | WP_005823354.1 | hypothetical protein | - |
| HQ939_RS06370 () | 1245974..1246333 | + | 360 | WP_173632055.1 | hypothetical protein | - |
| HQ939_RS06375 () | 1246364..1247161 | + | 798 | WP_173632056.1 | DUF2303 family protein | - |
| HQ939_RS06380 () | 1247241..1247504 | + | 264 | WP_021116938.1 | hypothetical protein | - |
| HQ939_RS06385 () | 1247518..1248207 | + | 690 | WP_075606024.1 | hypothetical protein | - |
| HQ939_RS06390 () | 1248220..1248375 | + | 156 | WP_160442013.1 | DUF551 domain-containing protein | - |
| HQ939_RS06395 () | 1248584..1248802 | - | 219 | WP_012621817.1 | hypothetical protein | - |
| HQ939_RS06400 () | 1249346..1250164 | + | 819 | WP_173632057.1 | hypothetical protein | - |
| HQ939_RS06405 () | 1250369..1250662 | + | 294 | WP_043894432.1 | hypothetical protein | - |
| HQ939_RS06410 () | 1250694..1250984 | + | 291 | WP_173632058.1 | hypothetical protein | - |
| HQ939_RS06415 () | 1250981..1251979 | - | 999 | WP_005712908.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| HQ939_RS06425 () | 1252282..1252611 | - | 330 | WP_005712907.1 | preprotein translocase subunit SecG | - |
| HQ939_RS06430 () | 1252737..1254656 | - | 1920 | WP_075606026.1 | DNA topoisomerase III | - |
| HQ939_RS06435 () | 1254664..1255488 | - | 825 | WP_075606027.1 | penicillin-insensitive murein endopeptidase | - |
| HQ939_RS06440 () | 1255503..1256579 | - | 1077 | WP_075606028.1 | 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM | - |
| HQ939_RS06445 () | 1256579..1256977 | - | 399 | WP_021110771.1 | DUF423 domain-containing protein | - |
| HQ939_RS06450 () | 1257283..1258302 | + | 1020 | WP_075606029.1 | GTP 3',8-cyclase MoaA | - |
| HQ939_RS06455 () | 1258416..1258895 | + | 480 | WP_021114994.1 | cyclic pyranopterin monophosphate synthase MoaC | - |
| HQ939_RS06460 () | 1258961..1259206 | + | 246 | WP_021113554.1 | molybdopterin synthase sulfur carrier subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|