MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 135032 bp
Accession: NZ_CP054149 Location: 1..135032 Organism: Agrobacterium vaccinii strain B19.1.4 Replicon: plasmid pB19.1.4b
Accession: NZ_CP054149 Location: 1..135032 Organism: Agrobacterium vaccinii strain B19.1.4 Replicon: plasmid pB19.1.4b
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRS00_RS23480 (HRS00_23415) | 1..1215 | + | 1215 | WP_233138054.1 | Sporulation initiation inhibitor protein Soj | VF |
| HRS00_RS23485 (HRS00_23420) | 1261..2304 | + | 1044 | WP_233138055.1 | plasmid partitioning protein RepB | - |
| HRS00_RS23490 (HRS00_23425) | 2457..3671 | + | 1215 | WP_233138056.1 | plasmid replication protein RepC | - |
| HRS00_RS23495 (HRS00_23430) | 3732..4070 | + | 339 | Protein_3 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HRS00_RS23500 (HRS00_23435) | 4067..4372 | + | 306 | WP_233138057.1 | helix-turn-helix domain-containing protein | - |
| HRS00_RS23505 (HRS00_23440) | 4580..4813 | - | 234 | WP_233138058.1 | hypothetical protein | - |
| HRS00_RS23510 (HRS00_23445) | 4815..5366 | - | 552 | WP_233138059.1 | Photosystem I P700 chlorophyll a apoprotein A2 | VF |
| HRS00_RS23515 (HRS00_23450) | 5447..5896 | - | 450 | WP_233138060.1 | hypothetical protein | - |
| HRS00_RS23520 (HRS00_23455) | 5981..6229 | - | 249 | WP_233138061.1 | hypothetical protein | - |
| HRS00_RS23525 (HRS00_23460) | 6660..7607 | + | 948 | WP_233138062.1 | YiiG family protein | - |
| HRS00_RS23530 (HRS00_23465) | 7899..8825 | + | 927 | WP_233138063.1 | hypothetical protein | - |
| HRS00_RS23535 (HRS00_23470) | 9832..10062 | - | 231 | WP_233138064.1 | helix-turn-helix transcriptional regulator | - |
| HRS00_RS23540 (HRS00_23475) | 10203..10919 | + | 717 | WP_233138065.1 | hypothetical protein | - |
| HRS00_RS23545 (HRS00_23480) | 11000..11376 | + | 377 | Protein_13 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HRS00_RS23550 (HRS00_23485) | 11357..11692 | + | 336 | WP_233138066.1 | helix-turn-helix transcriptional regulator | - |
| HRS00_RS23555 (HRS00_23495) | 12591..15752 | + | 3162 | WP_233138067.1 | hypothetical protein | Relaxase |
| HRS00_RS23560 (HRS00_23500) | 15833..15997 | + | 165 | Protein_16 | HigA family addiction module antitoxin | - |
| HRS00_RS23565 (HRS00_23505) | 16106..16588 | + | 483 | Protein_17 | IS21 family transposase ISMdi27 | Transposase |
| HRS00_RS23570 (HRS00_23510) | 16601..16987 | + | 387 | WP_233138107.1 | IS21 family transposase ISMdi27 | Transposase |
| HRS00_RS23575 | 17134..17847 | + | 714 | WP_233138068.1 | hypothetical protein | - |
| HRS00_RS23580 (HRS00_23520) | 18720..19511 | - | 792 | WP_233138069.1 | hypothetical protein | - |
| HRS00_RS23585 (HRS00_23525) | 19539..19799 | - | 261 | WP_233138070.1 | hypothetical protein | - |
| HRS00_RS23590 (HRS00_23530) | 20034..20429 | + | 396 | WP_233138071.1 | hypothetical protein | - |
| HRS00_RS23595 (HRS00_23535) | 20589..21266 | + | 678 | WP_112500370.1 | Transcriptional activator protein CopR | VF |
| HRS00_RS23600 (HRS00_23540) | 21253..22626 | + | 1374 | WP_233138072.1 | HAMP domain-containing sensor histidine kinase | - |
| HRS00_RS23605 (HRS00_23545) | 22698..23255 | + | 558 | WP_233138073.1 | dual specificity protein phosphatase family protein | - |
| HRS00_RS23610 (HRS00_23550) | 23337..23711 | - | 375 | WP_233138074.1 | PepSY domain-containing protein | - |
| HRS00_RS23615 (HRS00_23555) | 23812..24564 | - | 753 | WP_233138075.1 | Phosphatidylglycerophosphatase B | VF |
| HRS00_RS23620 (HRS00_23560) | 24659..25045 | - | 387 | WP_233138076.1 | diacylglycerol kinase | - |
| HRS00_RS23625 (HRS00_23565) | 25042..26697 | - | 1656 | WP_233138077.1 | Phosphoethanolamine transferase EptA | VF |
| HRS00_RS23630 (HRS00_23570) | 26886..27470 | + | 585 | WP_233138078.1 | putative iron export ATP-binding protein FetA | VF |
| HRS00_RS23635 (HRS00_23575) | 27467..28270 | + | 804 | WP_233138079.1 | ABC transporter permease | - |
| HRS00_RS24255 (HRS00_23580) | 28702..30534 | + | 1833 | WP_277880534.1 | Methyl-accepting chemotaxis protein II | VF |
| HRS00_RS23645 (HRS00_23585) | 30703..31968 | - | 1266 | WP_233138080.1 | glycerate kinase | - |
| HRS00_RS23650 (HRS00_23590) | 32007..32858 | - | 852 | WP_233138081.1 | 2-hydroxy-3-oxopropionate reductase | - |
| HRS00_RS23655 (HRS00_23595) | 32862..33647 | - | 786 | WP_233138082.1 | hydroxypyruvate isomerase | - |
| HRS00_RS23660 (HRS00_23600) | 33658..35370 | - | 1713 | WP_233138083.1 | Glutathione import ATP-binding protein GsiA | VF |
| HRS00_RS23665 (HRS00_23605) | 35381..36556 | - | 1176 | WP_233138084.1 | ABC transporter permease | - |
| HRS00_RS23670 (HRS00_23610) | 36566..37552 | - | 987 | WP_233138085.1 | ABC transporter permease | - |
| HRS00_RS23675 (HRS00_23615) | 37581..39695 | - | 2115 | WP_233138086.1 | family 10 glycosylhydrolase | - |
| HRS00_RS23680 (HRS00_23620) | 39799..41727 | - | 1929 | WP_233138087.1 | ABC transporter substrate-binding protein | - |
| HRS00_RS23685 (HRS00_23625) | 41934..42947 | + | 1014 | WP_233138088.1 | LacI family DNA-binding transcriptional regulator | - |
| HRS00_RS23690 (HRS00_23630) | 43015..43296 | - | 282 | WP_233138089.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HRS00_RS23695 (HRS00_23635) | 43296..43550 | - | 255 | WP_042619849.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| HRS00_RS23700 (HRS00_23640) | 43752..44228 | + | 477 | WP_233138090.1 | VOC family protein | - |
| HRS00_RS23705 (HRS00_23645) | 44737..45951 | + | 1215 | WP_233138091.1 | GGDEF domain-containing protein | - |
| HRS00_RS23710 (HRS00_23650) | 46385..46753 | - | 369 | WP_206591641.1 | response regulator | - |
| HRS00_RS23715 (HRS00_23655) | 46907..47947 | - | 1041 | WP_103588143.1 | sensor histidine kinase | - |
| HRS00_RS23720 (HRS00_23660) | 47944..49386 | - | 1443 | WP_233138092.1 | gas vesicle protein GvpD | - |
| HRS00_RS23725 (HRS00_23665) | 49489..53091 | - | 3603 | WP_233138093.1 | Blue-light-activated protein | VF |
| HRS00_RS23730 | 53583..53795 | - | 213 | Protein_50 | MFS transporter | - |
| HRS00_RS23735 (HRS00_23670) | 53891..54580 | - | 690 | WP_233138094.1 | DUF72 domain-containing protein | - |
| HRS00_RS23740 (HRS00_23675) | 54749..54934 | + | 186 | WP_233138108.1 | DUF3072 domain-containing protein | - |
| HRS00_RS23745 (HRS00_23680) | 55095..55667 | - | 573 | WP_233138095.1 | WHG domain-containing protein | - |
| HRS00_RS23750 (HRS00_23685) | 55805..56155 | + | 351 | WP_233138096.1 | DoxX family protein | - |
| HRS00_RS23755 (HRS00_23690) | 56254..56841 | + | 588 | WP_233138097.1 | flavodoxin family protein | - |
| HRS00_RS23760 (HRS00_23695) | 56928..57788 | - | 861 | WP_233138098.1 | alpha/beta hydrolase | - |
| HRS00_RS23765 (HRS00_23700) | 58110..59273 | - | 1164 | WP_233138099.1 | zinc-dependent alcohol dehydrogenase | - |
| HRS00_RS23770 | 59649..59714 | + | 66 | Protein_58 | DUF2934 domain-containing protein | - |
| HRS00_RS23775 (HRS00_23710) | 59981..60196 | + | 216 | WP_233138100.1 | SemiSWEET family transporter | - |
| HRS00_RS23780 (HRS00_23715) | 60275..60526 | - | 252 | WP_233138101.1 | hypothetical protein | - |
| HRS00_RS23785 (HRS00_23720) | 60554..60736 | - | 183 | WP_080803717.1 | hypothetical protein | - |
| HRS00_RS23790 (HRS00_23725) | 61166..63289 | - | 2124 | WP_233138102.1 | putative signaling protein | VF |
| HRS00_RS23795 (HRS00_23730) | 64179..64463 | + | 285 | WP_233138103.1 | hypothetical protein | - |
| HRS00_RS23800 (HRS00_23735) | 64736..65632 | - | 897 | WP_233138104.1 | fructose bisphosphate aldolase | - |
| HRS00_RS23805 (HRS00_23740) | 65743..66558 | - | 816 | WP_233138105.1 | GNAT family N-acetyltransferase | - |
| HRS00_RS23810 (HRS00_23745) | 66598..67071 | - | 474 | WP_233138106.1 | nuclear transport factor 2 family protein | - |
| HRS00_RS23815 (HRS00_23750) | 67068..67691 | - | 624 | WP_013637151.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| HRS00_RS23820 (HRS00_23755) | 67779..68765 | - | 987 | WP_112192467.1 | MBL fold metallo-hydrolase | - |
| HRS00_RS23825 (HRS00_23760) | 68897..69607 | - | 711 | WP_077122533.1 | alpha/beta hydrolase | - |
| HRS00_RS23830 (HRS00_23765) | 69931..71823 | + | 1893 | WP_077122496.1 | PAS domain S-box protein | - |
| HRS00_RS23835 (HRS00_23770) | 71820..72440 | + | 621 | WP_233138003.1 | response regulator | - |
| HRS00_RS23840 (HRS00_23775) | 72561..73469 | - | 909 | WP_077122498.1 | HTH-type transcriptional regulator DmlR | VF |
| HRS00_RS23845 (HRS00_23780) | 73603..74082 | + | 480 | WP_077122499.1 | carboxymuconolactone decarboxylase family protein | - |
| HRS00_RS23850 (HRS00_23785) | 74151..74903 | + | 753 | WP_112192465.1 | SDR family oxidoreductase | - |
| HRS00_RS23855 (HRS00_23790) | 74943..75365 | + | 423 | WP_077122501.1 | cupin domain-containing protein | - |
| HRS00_RS23860 (HRS00_23795) | 75432..76436 | + | 1005 | WP_233138004.1 | mechanosensitive ion channel family protein | - |
| HRS00_RS23865 (HRS00_23800) | 76433..76921 | - | 489 | WP_077122503.1 | Rrf2 family transcriptional regulator | - |
| HRS00_RS23870 (HRS00_23805) | 77264..77584 | + | 321 | Protein_78 | hypothetical protein | - |
| HRS00_RS23875 (HRS00_23810) | 77596..77946 | + | 351 | WP_112500381.1 | RidA family protein | - |
| HRS00_RS23880 (HRS00_23815) | 78071..78610 | - | 540 | WP_233138005.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| HRS00_RS23885 (HRS00_23820) | 78970..79116 | + | 147 | WP_159442799.1 | hypothetical protein | - |
| HRS00_RS23890 (HRS00_23825) | 79120..80913 | - | 1794 | WP_233138006.1 | hypothetical protein | - |
| HRS00_RS23895 (HRS00_23830) | 81199..84459 | - | 3261 | WP_233138007.1 | error-prone DNA polymerase | - |
| HRS00_RS23900 (HRS00_23835) | 84456..85967 | - | 1512 | WP_233138008.1 | DNA polymerase Y family protein | - |
| HRS00_RS23905 (HRS00_23840) | 85888..86640 | - | 753 | WP_233138009.1 | ImuA family protein | - |
| HRS00_RS23910 (HRS00_23845) | 86923..87975 | + | 1053 | WP_233138010.1 | non-homologous end-joining DNA ligase | - |
| HRS00_RS23915 (HRS00_23850) | 88321..88629 | + | 309 | WP_233138011.1 | hypothetical protein | - |
| HRS00_RS23920 (HRS00_23855) | 89184..90308 | - | 1125 | WP_233138012.1 | helix-turn-helix transcriptional regulator | - |
| HRS00_RS23925 (HRS00_23860) | 90713..91408 | + | 696 | WP_233138013.1 | SDR family oxidoreductase | - |
| HRS00_RS23930 (HRS00_23865) | 91491..91892 | + | 402 | WP_233138014.1 | VOC family protein | - |
| HRS00_RS23935 (HRS00_23870) | 92122..92987 | + | 866 | Protein_91 | multidrug DMT transporter permease | - |
| HRS00_RS23940 (HRS00_23875) | 93381..93935 | - | 555 | WP_233138015.1 | NUDIX hydrolase | - |
| HRS00_RS23945 (HRS00_23880) | 94130..95032 | - | 903 | WP_233138016.1 | HTH-type transcriptional regulator DmlR | VF |
| HRS00_RS23950 (HRS00_23885) | 95133..95759 | + | 627 | WP_233138017.1 | NAD(P)-binding domain-containing protein | - |
| HRS00_RS23955 (HRS00_23890) | 95824..96780 | - | 957 | WP_233138018.1 | NmrA/HSCARG family protein | - |
| HRS00_RS23960 (HRS00_23895) | 96892..97791 | + | 900 | WP_233138109.1 | LysR family transcriptional regulator | - |
| HRS00_RS23965 (HRS00_23900) | 98098..99120 | - | 1023 | WP_233138019.1 | transcriptional regulator FtrA | - |
| HRS00_RS23970 (HRS00_23905) | 99190..99576 | + | 387 | WP_233138020.1 | nuclear transport factor 2 family protein | - |
| HRS00_RS23975 (HRS00_23910) | 99907..100293 | + | 387 | WP_233138021.1 | VOC family protein | - |
| HRS00_RS23980 (HRS00_23915) | 100454..101434 | - | 981 | WP_233138110.1 | aldehyde reductase | - |
| HRS00_RS23985 (HRS00_23920) | 101523..101903 | + | 381 | WP_233138022.1 | helix-turn-helix domain-containing protein | - |
| HRS00_RS23990 (HRS00_23925) | 101922..102827 | - | 906 | WP_233138023.1 | HTH-type transcriptional regulator DmlR | VF |
| HRS00_RS23995 (HRS00_23930) | 102942..103694 | + | 753 | WP_233138024.1 | 3-alpha-hydroxycholanate dehydrogenase (NADP(+)) | VF |
| HRS00_RS24000 (HRS00_23935) | 103766..104182 | + | 417 | WP_233138025.1 | nuclear transport factor 2 family protein | - |
| HRS00_RS24005 (HRS00_23940) | 104804..105124 | + | 321 | WP_174041071.1 | hypothetical protein | - |
| HRS00_RS24010 (HRS00_23945) | 105297..106100 | + | 804 | WP_233138026.1 | hypothetical protein | - |
| HRS00_RS24015 (HRS00_23950) | 106141..106473 | + | 333 | WP_233138027.1 | hypothetical protein | - |
| HRS00_RS24020 (HRS00_23955) | 106457..109435 | - | 2979 | WP_233138028.1 | AAA family ATPase | - |
| HRS00_RS24025 (HRS00_23960) | 109502..110815 | - | 1314 | WP_233138029.1 | hypothetical protein | - |
| HRS00_RS24030 (HRS00_23965) | 110838..111344 | - | 507 | WP_233138030.1 | hypothetical protein | - |
| HRS00_RS24035 (HRS00_23970) | 111539..112231 | - | 693 | WP_233138031.1 | hypothetical protein | - |
| HRS00_RS24040 (HRS00_23975) | 112373..113314 | - | 942 | WP_233138032.1 | DUF4238 domain-containing protein | - |
| HRS00_RS24045 (HRS00_23980) | 113486..114112 | - | 627 | WP_233138033.1 | hypothetical protein | - |
| HRS00_RS24050 | 114178..114603 | - | 426 | Protein_114 | nucleotide-binding protein | - |
| HRS00_RS24055 (HRS00_23990) | 115148..116275 | - | 1128 | WP_233138034.1 | nucleotide-binding protein | - |
| HRS00_RS24060 (HRS00_23995) | 116793..117659 | + | 867 | WP_233138035.1 | hypothetical protein | - |
| HRS00_RS24065 (HRS00_24000) | 117709..118836 | - | 1128 | WP_233138036.1 | RHE_PE00001 family protein | - |
| HRS00_RS24070 (HRS00_24005) | 119025..119312 | + | 288 | WP_233138037.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| HRS00_RS24075 (HRS00_24010) | 119309..119686 | + | 378 | WP_233138038.1 | type II toxin-antitoxin system VapC family toxin | - |
| HRS00_RS24080 (HRS00_24015) | 119694..119942 | + | 249 | WP_233138039.1 | prevent-host-death family protein | - |
| HRS00_RS24085 (HRS00_24020) | 119939..121066 | + | 1128 | WP_233138040.1 | tyrosine-type recombinase/integrase | - |
| HRS00_RS24090 (HRS00_24025) | 121090..121536 | + | 447 | WP_233138041.1 | hypothetical protein | - |
| HRS00_RS24095 (HRS00_24030) | 121719..122540 | - | 822 | WP_233138042.1 | LON peptidase substrate-binding domain-containing protein | - |
| HRS00_RS24100 (HRS00_24035) | 122739..123557 | - | 819 | WP_233138043.1 | hypothetical protein | - |
| HRS00_RS24105 (HRS00_24040) | 123894..126341 | + | 2448 | WP_233138044.1 | type VI secretion system tip protein TssI/VgrG | - |
| HRS00_RS24110 (HRS00_24045) | 126343..127305 | + | 963 | WP_233138045.1 | hypothetical protein | - |
| HRS00_RS24115 (HRS00_24050) | 127306..128079 | + | 774 | WP_233138046.1 | hypothetical protein | - |
| HRS00_RS24120 (HRS00_24055) | 128090..128941 | + | 852 | WP_233138047.1 | hypothetical protein | - |
| HRS00_RS24125 (HRS00_24060) | 129227..130180 | + | 954 | WP_233138048.1 | DUF4123 domain-containing protein | - |
| HRS00_RS24130 (HRS00_24065) | 130180..130836 | + | 657 | WP_233138049.1 | hypothetical protein | - |
| HRS00_RS24135 (HRS00_24070) | 130846..131805 | + | 960 | WP_233138050.1 | hypothetical protein | - |
| HRS00_RS24140 (HRS00_24075) | 132019..132384 | + | 366 | WP_233138051.1 | GNAT family N-acetyltransferase | - |
| HRS00_RS24145 (HRS00_24080) | 132412..132714 | + | 303 | WP_233138052.1 | PAAR domain-containing protein | - |
| HRS00_RS24150 (HRS00_24085) | 132900..134108 | + | 1209 | WP_233138053.1 | transglutaminase domain-containing protein | - |
| HRS00_RS24155 | 134382..134548 | + | 167 | Protein_135 | IS6 family transposase ISBj7 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|