NZ_CP0541062343439..2505040

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 161602 bp
Accession: NZ_CP054106        Location: 2343439..2505040         Organism: Bordetella pertussis strain NZ24       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HRJ78_RS11300 (HRJ78_11300) 2338636..2340537 + 1902 WP_010930517.1 TRAP transporter large permease subunit -
HRJ78_RS11305 (HRJ78_11305) 2340586..2341380 + 795 WP_010930516.1 enoyl-CoA hydratase/isomerase family protein -
HRJ78_RS11310 (HRJ78_11310) 2341393..2342394 - 1002 WP_010930515.1 LD-carboxypeptidase -
HRJ78_RS11315 (HRJ78_11315) 2342391..2342897 - 507 WP_004568494.1 tRNA adenosine(34) deaminase TadA -
HRJ78_RS11320 (HRJ78_11320) 2342890..2343738 - 849 WP_010930513.1 HAD family hydrolase -
HRJ78_RS11325 (HRJ78_11325) 2343836..2344378 - 543 WP_019247780.1 hypothetical protein -
HRJ78_RS11330 (HRJ78_11330) 2344422..2345372 - 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRJ78_RS11335 (HRJ78_11335) 2345528..2345854 - 327 WP_010930511.1 monovalent cation/H(+) antiporter subunit G -
HRJ78_RS11340 (HRJ78_11340) 2345851..2346135 - 285 WP_003810975.1 K+/H+ antiporter subunit F -
HRJ78_RS11345 (HRJ78_11345) 2346132..2346611 - 480 WP_010930510.1 Na+/H+ antiporter subunit E -
HRJ78_RS11350 (HRJ78_11350) 2346608..2348236 - 1629 WP_004568496.1 monovalent cation/H+ antiporter subunit D -
HRJ78_RS11355 (HRJ78_11355) 2348233..2348577 - 345 WP_003810969.1 Na+/H+ antiporter subunit C -
HRJ78_RS11360 (HRJ78_11360) 2348577..2351510 - 2934 WP_010930509.1 monovalent cation/H+ antiporter subunit A -
HRJ78_RS11365 (HRJ78_11365) 2351932..2352669 + 738 Protein_2231 tripartite tricarboxylate transporter substrate-binding protein -
HRJ78_RS11370 (HRJ78_11370) 2352669..2353619 - 951 WP_010930208.1 IS481 family transposase IS481v2 Transposase
HRJ78_RS11375 (HRJ78_11375) 2353718..2354014 - 297 WP_003811452.1 hypothetical protein -
HRJ78_RS11380 (HRJ78_11380) 2354136..2355038 + 903 WP_023995058.1 HTH-type transcriptional regulator CynR VF
HRJ78_RS11385 (HRJ78_11385) 2355043..2355756 - 714 WP_010930507.1 Sulfoquinovose 1-dehydrogenase VF
HRJ78_RS11390 (HRJ78_11390) 2355770..2356741 - 972 WP_010930506.1 tripartite tricarboxylate transporter substrate binding protein -
HRJ78_RS11395 (HRJ78_11395) 2356866..2358194 - 1329 Protein_2237 amidohydrolase family protein -
HRJ78_RS11400 (HRJ78_11400) 2358461..2358841 + 381 WP_019249653.1 helix-turn-helix domain-containing protein -
HRJ78_RS11405 (HRJ78_11405) 2358845..2360032 + 1188 WP_010930504.1 MFS transporter -
HRJ78_RS11410 (HRJ78_11410) 2360056..2360478 + 423 Protein_2240 arsenate reductase (glutaredoxin) -
HRJ78_RS11415 (HRJ78_11415) 2360471..2361193 + 723 WP_010930503.1 arsenical resistance protein ArsH -
HRJ78_RS11420 (HRJ78_11420) 2361190..2361381 - 192 WP_023852764.1 hypothetical protein -
HRJ78_RS11425 (HRJ78_11425) 2361487..2362437 + 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRJ78_RS11430 (HRJ78_11430) 2362434..2362862 - 429 WP_019249376.1 hypothetical protein -
HRJ78_RS11435 (HRJ78_11435) 2362859..2364249 - 1391 Protein_2245 Arylsulfatase VF
HRJ78_RS11440 (HRJ78_11440) 2364264..2365226 - 963 WP_003811538.1 tripartite tricarboxylate transporter substrate binding protein -
HRJ78_RS11445 (HRJ78_11445) 2365342..2366295 + 954 WP_010930502.1 LysR family transcriptional regulator -
HRJ78_RS11450 (HRJ78_11450) 2366305..2367297 - 993 WP_010930501.1 tripartite tricarboxylate transporter substrate binding protein -
HRJ78_RS11455 (HRJ78_11455) 2367349..2368104 - 756 WP_010930500.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG VF
HRJ78_RS11460 (HRJ78_11460) 2368169..2368849 - 681 WP_019248752.1 SDR family oxidoreductase -
HRJ78_RS11465 (HRJ78_11465) 2368939..2370030 + 1092 WP_023997526.1 fumarylacetoacetate hydrolase family protein -
HRJ78_RS11470 (HRJ78_11470) 2370061..2371257 + 1197 WP_010930497.1 alpha-hydroxy acid oxidase -
HRJ78_RS11475 (HRJ78_11475) 2371254..2372027 + 774 WP_010930496.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG VF
HRJ78_RS11480 (HRJ78_11480) 2372044..2373066 + 1023 WP_023852774.1 tripartite tricarboxylate transporter substrate binding protein -
HRJ78_RS11485 (HRJ78_11485) 2373152..2374096 + 945 WP_010930494.1 LysR family transcriptional regulator -
HRJ78_RS11490 (HRJ78_11490) 2374074..2374943 - 870 WP_010930493.1 TauD/TfdA family dioxygenase -
HRJ78_RS11495 (HRJ78_11495) 2375187..2375810 + 624 WP_010930492.1 glutathione S-transferase N-terminal domain-containing protein -
HRJ78_RS11500 (HRJ78_11500) 2375943..2376122 + 180 WP_225975616.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
HRJ78_RS11505 (HRJ78_11505) 2376125..2376424 + 300 WP_019247905.1 NadS family protein Antitoxin Detail
HRJ78_RS11510 (HRJ78_11510) 2376438..2379512 - 3075 WP_023995112.1 autotransporter SphB2 -
HRJ78_RS11515 (HRJ78_11515) 2379642..2380316 + 675 WP_010930489.1 putative transcriptional regulatory protein NarL VF
HRJ78_RS11520 (HRJ78_11520) 2380309..2382123 + 1815 WP_019247865.1 7TM diverse intracellular signaling domain-containing protein -
HRJ78_RS11525 (HRJ78_11525) 2382177..2383124 - 948 WP_010930487.1 hypothetical protein -
HRJ78_RS11530 (HRJ78_11530) 2383229..2384179 + 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRJ78_RS11535 (HRJ78_11535) 2384195..2384653 - 459 Protein_2265 spermidine synthase -
HRJ78_RS11540 (HRJ78_11540) 2384732..2386357 - 1626 WP_023852967.1 Arylsulfatase VF
HRJ78_RS11545 (HRJ78_11545) 2386407..2387441 - 1035 WP_010930475.1 HAD family hydrolase -
HRJ78_RS11550 (HRJ78_11550) 2387444..2388790 - 1347 WP_010930476.1 BatD family protein -
HRJ78_RS11555 (HRJ78_11555) 2388787..2390301 - 1515 WP_010930477.1 VWA domain-containing protein -
HRJ78_RS11560 (HRJ78_11560) 2390292..2391302 - 1011 WP_010930478.1 VWA domain-containing protein -
HRJ78_RS11565 (HRJ78_11565) 2391289..2391779 - 491 Protein_2271 DUF4381 domain-containing protein -
HRJ78_RS11570 (HRJ78_11570) 2391776..2392717 - 942 WP_010930479.1 DUF58 domain-containing protein -
HRJ78_RS11575 (HRJ78_11575) 2392726..2393694 - 969 WP_010930480.1 AAA family ATPase -
HRJ78_RS11580 (HRJ78_11580) 2393750..2394890 - 1141 Protein_2274 formylglycine-generating enzyme family protein -
HRJ78_RS11585 (HRJ78_11585) 2395234..2396202 + 969 WP_010930481.1 transporter -
HRJ78_RS11590 (HRJ78_11590) 2396380..2397369 + 990 WP_010930482.1 tripartite tricarboxylate transporter substrate binding protein -
HRJ78_RS11595 (HRJ78_11595) 2397416..2398174 + 759 WP_010926609.1 Dihydroanticapsin 7-dehydrogenase VF
HRJ78_RS11600 (HRJ78_11600) 2398364..2399101 + 738 WP_010930483.1 TerC family protein -
HRJ78_RS11605 (HRJ78_11605) 2399200..2400150 + 951 WP_005012808.1 IS481 family transposase IS481v2 Transposase
HRJ78_RS11610 (HRJ78_11615) 2400335..2401117 + 783 WP_003816696.1 ABC transporter ATP-binding protein -
HRJ78_RS11615 (HRJ78_11620) 2401111..2401812 + 702 WP_003810743.1 High-affinity branched-chain amino acid transport ATP-binding protein LivF VF
HRJ78_RS11620 (HRJ78_11625) 2402052..2402654 + 603 WP_003810741.1 TetR/AcrR family transcriptional regulator -
HRJ78_RS11625 (HRJ78_11630) 2402630..2403544 - 915 WP_010930484.1 FAD-dependent oxidoreductase -
HRJ78_RS11630 (HRJ78_11635) 2403981..2404931 + 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRJ78_RS11635 (HRJ78_11640) 2404928..2406484 - 1557 WP_014486074.1 hypothetical protein VF
HRJ78_RS11640 (HRJ78_11645) 2406477..2407250 - 774 WP_010930486.1 putative oxidoreductase VF
HRJ78_RS11645 (HRJ78_11650) 2407309..2408259 - 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRJ78_RS11650 (HRJ78_11655) 2408341..2409516 - 1176 WP_023852812.1 hypothetical protein VF
HRJ78_RS11655 (HRJ78_11660) 2409530..2411587 - 2058 WP_010930473.1 hypothetical protein VF
HRJ78_RS11660 (HRJ78_11665) 2411584..2412609 - 1026 WP_010930472.1 UDP-N-acetylglucosamine 4-epimerase VF
HRJ78_RS11665 (HRJ78_11670) 2412621..2413910 - 1290 WP_010930471.1 UDP-N-acetyl-D-glucosamine 6-dehydrogenase VF
HRJ78_RS11670 (HRJ78_11675) 2413933..2415030 - 1098 WP_010930470.1 hypothetical protein VF
HRJ78_RS11675 (HRJ78_11680) 2415027..2415917 - 891 WP_003811224.1 capsular polysaccharide biosynthesis protein -
HRJ78_RS11680 (HRJ78_11685) 2415914..2417998 - 2085 WP_010930469.1 Putative glycosyltransferase EpsF VF
HRJ78_RS11685 (HRJ78_11690) 2418030..2419199 - 1170 WP_010930468.1 capsule polysaccharide transporter -
HRJ78_RS11690 (HRJ78_11695) 2419241..2419981 - 741 WP_014486073.1 Polysialic acid transport ATP-binding protein KpsT VF
HRJ78_RS11695 (HRJ78_11700) 2419981..2420751 - 771 WP_010930466.1 Polysialic acid transport protein KpsM VF
HRJ78_RS11700 (HRJ78_11705) 2421076..2421243 + 168 WP_019247171.1 hypothetical protein -
HRJ78_RS11705 (HRJ78_11710) 2421511..2422392 + 882 WP_023995078.1 Putative glycosyltransferase EpsH VF
HRJ78_RS11710 (HRJ78_11715) 2422419..2424503 + 2085 WP_010930464.1 hypothetical protein -
HRJ78_RS11715 (HRJ78_11720) 2424641..2426626 + 1986 WP_010930463.1 hypothetical protein VF
HRJ78_RS11720 (HRJ78_11725) 2426950..2427450 - 501 WP_003811209.1 DNA protection during starvation protein 2 VF
HRJ78_RS11725 (HRJ78_11730) 2427549..2429075 - 1527 WP_010930461.1 CoA-acylating methylmalonate-semialdehyde dehydrogenase -
HRJ78_RS11730 (HRJ78_11735) 2429213..2430100 + 888 WP_010930460.1 HTH-type transcriptional regulator DmlR VF
HRJ78_RS11735 (HRJ78_11740) 2430115..2431068 - 954 WP_003811203.1 Hydrogen peroxide-inducible genes activator VF
HRJ78_RS11740 (HRJ78_11745) 2431120..2433210 - 2091 WP_033446218.1 ATP-dependent DNA helicase RecG -
HRJ78_RS11745 (HRJ78_11750) 2433226..2433612 - 387 WP_010930458.1 Rid family detoxifying hydrolase -
HRJ78_RS11750 (HRJ78_11755) 2433789..2436142 - 2354 Protein_2308 Pertactin autotransporter VF
HRJ78_RS11755 (HRJ78_11760) 2436306..2437109 - 804 WP_010930457.1 2,5-didehydrogluconate reductase DkgB -
HRJ78_RS11760 (HRJ78_11765) 2437181..2438301 - 1121 Protein_2310 MFS transporter -
HRJ78_RS11765 (HRJ78_11770) 2438403..2439305 + 903 WP_010930456.1 HTH-type transcriptional regulator DmlR VF
HRJ78_RS11770 (HRJ78_11775) 2439370..2440146 - 777 WP_003811187.1 ferredoxin--NADP reductase -
HRJ78_RS11775 (HRJ78_11780) 2440468..2441517 + 1050 WP_010930455.1 Fe(3+) ABC transporter substrate-binding protein -
HRJ78_RS11780 (HRJ78_11785) 2441641..2443311 + 1671 WP_010930454.1 iron ABC transporter permease -
HRJ78_RS11785 (HRJ78_11790) 2443316..2444110 + 795 WP_019248220.1 Sulfate/thiosulfate import ATP-binding protein CysA VF
HRJ78_RS11790 (HRJ78_11795) 2444209..2445159 + 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRJ78_RS11795 (HRJ78_11800) 2445179..2446084 - 906 WP_010930453.1 pirin family protein -
HRJ78_RS11800 (HRJ78_11805) 2446162..2446860 - 699 WP_003811176.1 pirin family protein -
HRJ78_RS11805 (HRJ78_11810) 2447020..2447964 + 945 WP_010930452.1 HTH-type transcriptional regulator YhaJ VF
HRJ78_RS11810 (HRJ78_11815) 2447974..2449461 - 1488 WP_010930451.1 DNA-binding transcriptional regulator NtrC VF
HRJ78_RS11815 (HRJ78_11820) 2449461..2450528 - 1068 WP_003811167.1 nitrogen regulation protein NR(II) -
HRJ78_RS11820 (HRJ78_11825) 2450592..2452004 - 1413 WP_003811164.1 type I glutamate--ammonia ligase -
HRJ78_RS11825 (HRJ78_11830) 2452190..2453410 - 1221 WP_010930450.1 Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR VF
HRJ78_RS11830 (HRJ78_11835) 2453432..2454382 - 951 WP_005012808.1 IS481 family transposase IS481v2 Transposase
HRJ78_RS11835 (HRJ78_11840) 2454481..2455122 - 642 WP_010930449.1 dITP/XTP pyrophosphatase VF
HRJ78_RS11840 (HRJ78_11845) 2455249..2457051 + 1803 WP_010930448.1 EAL domain-containing protein -
HRJ78_RS11845 (HRJ78_11850) 2457190..2458620 - 1431 Protein_2327 Methyl-accepting chemotaxis protein I VF
HRJ78_RS11850 (HRJ78_11855) 2458703..2459608 - 906 WP_003811152.1 LysR family transcriptional regulator -
HRJ78_RS11855 (HRJ78_11860) 2459790..2461166 + 1377 WP_010930446.1 MmgE/PrpD family protein -
HRJ78_RS11860 (HRJ78_11865) 2461333..2462073 - 741 WP_003811149.1 ribonuclease PH -
HRJ78_RS11865 (HRJ78_11870) 2462210..2463136 + 927 WP_003811148.1 YicC/YloC family endoribonuclease -
HRJ78_RS11870 (HRJ78_11875) 2463409..2463564 + 156 WP_010930445.1 hypothetical protein -
HRJ78_RS19815 2463577..2463705 + 129 WP_010928840.1 hypothetical protein -
HRJ78_RS11875 (HRJ78_11880) 2463702..2463986 + 285 WP_010926696.1 helix-turn-helix domain-containing protein -
HRJ78_RS11880 (HRJ78_11885) 2464045..2465535 - 1491 WP_003811138.1 AMP nucleosidase -
HRJ78_RS11885 (HRJ78_11890) 2465780..2466379 + 600 WP_003811137.1 Murein DD-endopeptidase MepH VF
HRJ78_RS11890 (HRJ78_11895) 2466384..2467154 - 771 WP_003811135.1 3-beta-hydroxycholanate 3-dehydrogenase (NADP(+)) VF
HRJ78_RS11895 (HRJ78_11900) 2467392..2468105 + 714 WP_010930444.1 Cytochrome c4 VF
HRJ78_RS11900 (HRJ78_11905) 2468102..2469019 + 918 WP_010930443.1 c-type cytochrome -
HRJ78_RS11905 (HRJ78_11910) 2469155..2469787 + 633 WP_010930442.1 guanylate kinase -
HRJ78_RS11910 (HRJ78_11915) 2469829..2470032 + 204 WP_010930441.1 DNA-directed RNA polymerase subunit omega -
HRJ78_RS11915 (HRJ78_11920) 2470057..2472336 + 2280 WP_010930440.1 Bifunctional (p)ppGpp synthase/hydrolase SpoT VF
HRJ78_RS11920 (HRJ78_11925) 2472349..2473077 - 729 WP_003811113.1 Glutamine transport ATP-binding protein GlnQ VF
HRJ78_RS11925 (HRJ78_11930) 2473074..2473733 - 660 WP_003811112.1 glutamine ABC transporter permease GlnP -
HRJ78_RS11930 (HRJ78_11935) 2473802..2474554 - 753 WP_010930439.1 glutamine ABC transporter substrate-binding protein GlnH -
HRJ78_RS11935 (HRJ78_11940) 2474736..2475686 - 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRJ78_RS11940 (HRJ78_11945) 2475845..2476493 + 649 Protein_2347 site-2 protease family protein -
HRJ78_RS11945 (HRJ78_11950) 2476579..2477484 + 906 WP_033446216.1 4-hydroxy-tetrahydrodipicolinate synthase -
HRJ78_RS11950 (HRJ78_11955) 2477496..2478623 + 1128 WP_010930437.1 outer membrane protein assembly factor BamC -
HRJ78_RS11955 (HRJ78_11960) 2478712..2479326 - 615 WP_010930436.1 Major fimbrial subunit SMF-1 VF
HRJ78_RS11960 (HRJ78_11965) 2479981..2481168 - 1188 WP_010930435.1 cupin domain-containing protein -
HRJ78_RS11965 (HRJ78_11970) 2481165..2483762 - 2598 WP_033446228.1 DNA mismatch repair protein MutS -
HRJ78_RS11970 (HRJ78_11975) 2484017..2484232 + 216 WP_010930433.1 dodecin family protein -
HRJ78_RS11975 (HRJ78_11980) 2484688..2485242 - 555 WP_010930432.1 NAD(P)H-dependent oxidoreductase -
HRJ78_RS11980 (HRJ78_11985) 2485510..2486070 + 561 WP_010930431.1 membrane protein -
HRJ78_RS11985 (HRJ78_11990) 2486182..2487486 + 1305 WP_023853587.1 imelysin family protein -
HRJ78_RS11990 (HRJ78_11995) 2487483..2488994 + 1512 WP_019247498.1 di-heme oxidoredictase family protein -
HRJ78_RS11995 (HRJ78_12000) 2489046..2490101 + 1056 WP_224019495.1 imelysin family protein -
HRJ78_RS12000 (HRJ78_12005) 2490091..2491203 + 1113 WP_019249265.1 DUF1513 domain-containing protein -
HRJ78_RS12005 (HRJ78_12010) 2491302..2492252 + 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRJ78_RS12010 (HRJ78_12015) 2492249..2492875 - 627 WP_240080843.1 L-threonylcarbamoyladenylate synthase -
HRJ78_RS12015 (HRJ78_12020) 2492935..2493786 + 852 WP_010930427.1 neutral zinc metallopeptidase -
HRJ78_RS12020 (HRJ78_12025) 2493890..2494489 + 600 WP_010930426.1 hypothetical protein -
HRJ78_RS12025 (HRJ78_12030) 2494486..2495250 + 765 WP_010930425.1 hypothetical protein -
HRJ78_RS12030 (HRJ78_12035) 2495320..2496270 - 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRJ78_RS12035 (HRJ78_12040) 2496369..2496977 - 609 WP_010930424.1 recombination mediator RecR -
HRJ78_RS12040 (HRJ78_12045) 2497028..2497354 - 327 WP_010930423.1 YbaB/EbfC family nucleoid-associated protein -
HRJ78_RS12045 (HRJ78_12050) 2497401..2499491 - 2091 WP_010930422.1 DNA polymerase III subunit gamma/tau -
HRJ78_RS12055 (HRJ78_12060) 2500294..2503698 - 3405 WP_010930421.1 UvrD-helicase domain-containing protein -
HRJ78_RS12060 (HRJ78_12065) 2503711..2506371 - 2661 WP_010930420.1 PD-(D/E)XK nuclease family protein -
HRJ78_RS12065 (HRJ78_12070) 2506393..2506539 - 147 WP_004568212.1 hypothetical protein -
HRJ78_RS12070 (HRJ78_12075) 2506575..2507777 - 1203 WP_010930419.1 MFS transporter -
HRJ78_RS12080 (HRJ78_12085) 2508464..2509576 + 1113 WP_023994932.1 D-alanyl-D-alanine endopeptidase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance