MGE detailed information
MGE type: Genomic_island MGE length: 40384 bp
Accession: NZ_CP054087 Location: 2720879..2761262 Organism: Bordetella pertussis strain NZ44 Replicon: chromosome
Accession: NZ_CP054087 Location: 2720879..2761262 Organism: Bordetella pertussis strain NZ44 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRJ98_RS13165 (HRJ98_13080) | 2716561..2717802 | - | 1242 | WP_010931022.1 | MFS transporter | - |
| HRJ98_RS13170 (HRJ98_13085) | 2717846..2718877 | - | 1032 | WP_010931023.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| HRJ98_RS13175 (HRJ98_13090) | 2718874..2720043 | - | 1170 | WP_010931024.1 | FAD-dependent oxidoreductase | - |
| HRJ98_RS13180 (HRJ98_13095) | 2720037..2720717 | - | 681 | WP_010931025.1 | cupin domain-containing protein | - |
| HRJ98_RS13185 (HRJ98_13100) | 2720879..2721796 | + | 918 | Protein_2588 | Glycine cleavage system transcriptional activator | VF |
| HRJ98_RS13190 (HRJ98_13105) | 2721884..2722855 | - | 972 | WP_010931027.1 | helix-turn-helix domain-containing protein | - |
| HRJ98_RS13195 (HRJ98_13110) | 2723027..2723905 | + | 879 | WP_010931028.1 | MBL fold metallo-hydrolase | - |
| HRJ98_RS13200 (HRJ98_13115) | 2723928..2724998 | - | 1071 | WP_010931029.1 | FUSC family protein | - |
| HRJ98_RS13205 (HRJ98_13120) | 2725039..2725989 | - | 951 | WP_005013747.1 | IS481 family transposase IS481 | Transposase |
| HRJ98_RS13210 (HRJ98_13125) | 2726282..2727640 | - | 1359 | WP_010931030.1 | MBL fold metallo-hydrolase | - |
| HRJ98_RS13215 (HRJ98_13130) | 2727752..2729479 | + | 1728 | WP_010931031.1 | sulfate permease | - |
| HRJ98_RS13220 (HRJ98_13135) | 2729540..2730103 | + | 564 | Protein_2595 | DJ-1/PfpI family protein | - |
| HRJ98_RS13225 (HRJ98_13140) | 2730101..2731051 | - | 951 | WP_005013747.1 | IS481 family transposase IS481 | Transposase |
| HRJ98_RS13230 | 2731171..2731488 | - | 318 | WP_019247980.1 | hypothetical protein | - |
| HRJ98_RS13235 (HRJ98_13150) | 2731799..2732143 | - | 345 | WP_223851199.1 | DUF126 domain-containing protein | - |
| HRJ98_RS13240 (HRJ98_13155) | 2732226..2733461 | - | 1236 | WP_003816890.1 | aconitase X | - |
| HRJ98_RS13245 (HRJ98_13160) | 2733469..2734263 | - | 795 | WP_010931033.1 | ABC transporter permease | - |
| HRJ98_RS13250 (HRJ98_13165) | 2734260..2735063 | - | 804 | WP_010931034.1 | Bicarbonate transport ATP-binding protein CmpD | VF |
| HRJ98_RS13255 (HRJ98_13170) | 2735090..2736067 | - | 978 | WP_010931035.1 | ABC transporter substrate-binding protein | - |
| HRJ98_RS13260 (HRJ98_13175) | 2736096..2737643 | - | 1548 | WP_224019491.1 | amidohydrolase | - |
| HRJ98_RS13265 (HRJ98_13180) | 2737678..2738481 | - | 804 | WP_019248072.1 | IclR family transcriptional regulator | - |
| HRJ98_RS13270 (HRJ98_13185) | 2738914..2739992 | - | 1079 | Protein_2605 | tellurite resistance/C4-dicarboxylate transporter family protein | - |
| HRJ98_RS13275 (HRJ98_13190) | 2740224..2741654 | - | 1431 | WP_019247976.1 | MFS transporter | - |
| HRJ98_RS13280 (HRJ98_13195) | 2741667..2742356 | + | 690 | WP_010931038.1 | TetR/AcrR family transcriptional regulator | - |
| HRJ98_RS13285 (HRJ98_13200) | 2742452..2743792 | - | 1341 | WP_003816876.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| HRJ98_RS13290 (HRJ98_13205) | 2743794..2744051 | - | 258 | WP_019247974.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| HRJ98_RS13295 (HRJ98_13210) | 2744405..2745997 | - | 1593 | WP_010931040.1 | glutamine-hydrolyzing GMP synthase | - |
| HRJ98_RS13300 (HRJ98_13215) | 2746094..2747554 | - | 1461 | WP_003812368.1 | IMP dehydrogenase | - |
| HRJ98_RS13305 (HRJ98_13220) | 2747777..2748388 | + | 612 | WP_010931041.1 | DUF2239 family protein | - |
| HRJ98_RS13310 (HRJ98_13225) | 2748385..2750553 | - | 2169 | Protein_2613 | autotransporter domain-containing protein | - |
| HRJ98_RS13315 | 2750803..2751441 | - | 639 | WP_019247971.1 | helix-turn-helix transcriptional regulator | - |
| HRJ98_RS13320 | 2751611..2751949 | + | 339 | WP_225719671.1 | hypothetical protein | - |
| HRJ98_RS13325 (HRJ98_13235) | 2752135..2753083 | - | 949 | Protein_2616 | IS481 family transposase IS481v1 | Transposase |
| HRJ98_RS13330 (HRJ98_13240) | 2753182..2753427 | + | 246 | Protein_2617 | tripartite tricarboxylate transporter substrate-binding protein | - |
| HRJ98_RS13335 (HRJ98_13245) | 2753498..2756134 | - | 2637 | WP_010931042.1 | AAA family ATPase | - |
| HRJ98_RS13340 (HRJ98_13250) | 2756131..2757255 | - | 1125 | WP_014486086.1 | DNA repair exonuclease | - |
| HRJ98_RS13345 (HRJ98_13255) | 2757252..2758634 | - | 1383 | WP_019247521.1 | D-amino acid dehydrogenase | - |
| HRJ98_RS13350 (HRJ98_13260) | 2758770..2759237 | + | 468 | WP_003810957.1 | winged helix-turn-helix transcriptional regulator | - |
| HRJ98_RS13355 (HRJ98_13265) | 2759359..2760102 | + | 744 | WP_167562453.1 | DUF502 domain-containing protein | - |
| HRJ98_RS13360 | 2760156..2761289 | + | 1134 | Protein_2623 | hypothetical protein | - |
| HRJ98_RS13365 (HRJ98_13275) | 2761302..2763032 | - | 1731 | WP_010931046.1 | ABC transporter substrate-binding protein | - |
| HRJ98_RS13370 (HRJ98_13280) | 2763150..2763458 | - | 309 | WP_004568502.1 | DUF2160 domain-containing protein | - |
| HRJ98_RS13375 (HRJ98_13285) | 2763471..2764283 | - | 813 | WP_010931047.1 | carbohydrate ABC transporter permease | - |
| HRJ98_RS13380 (HRJ98_13290) | 2764276..2765167 | - | 892 | Protein_2627 | sugar ABC transporter permease | - |
| HRJ98_RS13385 (HRJ98_13295) | 2765164..2766252 | - | 1089 | WP_010931048.1 | ABC transporter ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|