NZ_CP0540872340775..2502346

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 161572 bp
Accession: NZ_CP054087        Location: 2340775..2502346         Organism: Bordetella pertussis strain NZ44       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HRJ98_RS11290 (HRJ98_11200) 2335972..2337873 + 1902 WP_010930517.1 TRAP transporter large permease subunit -
HRJ98_RS11295 (HRJ98_11205) 2337922..2338716 + 795 WP_010930516.1 enoyl-CoA hydratase/isomerase family protein -
HRJ98_RS11300 (HRJ98_11210) 2338729..2339730 - 1002 WP_010930515.1 LD-carboxypeptidase -
HRJ98_RS11305 (HRJ98_11215) 2339727..2340233 - 507 WP_004568494.1 tRNA adenosine(34) deaminase TadA -
HRJ98_RS11310 (HRJ98_11220) 2340226..2341074 - 849 WP_010930513.1 HAD family hydrolase -
HRJ98_RS11315 (HRJ98_11225) 2341172..2341714 - 543 WP_019247780.1 hypothetical protein -
HRJ98_RS11320 (HRJ98_11230) 2341758..2342708 - 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRJ98_RS11325 (HRJ98_11235) 2342862..2343188 - 327 WP_010930511.1 monovalent cation/H(+) antiporter subunit G -
HRJ98_RS11330 (HRJ98_11240) 2343185..2343469 - 285 WP_003810975.1 K+/H+ antiporter subunit F -
HRJ98_RS11335 (HRJ98_11245) 2343466..2343945 - 480 WP_010930510.1 Na+/H+ antiporter subunit E -
HRJ98_RS11340 (HRJ98_11250) 2343942..2345570 - 1629 WP_004568496.1 monovalent cation/H+ antiporter subunit D -
HRJ98_RS11345 (HRJ98_11255) 2345567..2345911 - 345 WP_003810969.1 Na+/H+ antiporter subunit C -
HRJ98_RS11350 (HRJ98_11260) 2345911..2348844 - 2934 WP_010930509.1 monovalent cation/H+ antiporter subunit A -
HRJ98_RS11355 (HRJ98_11265) 2349266..2350003 + 738 Protein_2225 tripartite tricarboxylate transporter substrate-binding protein -
HRJ98_RS11360 (HRJ98_11270) 2350003..2350951 - 949 Protein_2226 IS481 family transposase IS481v1 Transposase
HRJ98_RS11365 (HRJ98_11275) 2351049..2351345 - 297 WP_003811452.1 hypothetical protein -
HRJ98_RS11370 (HRJ98_11280) 2351467..2352369 + 903 WP_023995058.1 HTH-type transcriptional regulator CynR VF
HRJ98_RS11375 (HRJ98_11285) 2352374..2353087 - 714 WP_010930507.1 Sulfoquinovose 1-dehydrogenase VF
HRJ98_RS11380 (HRJ98_11290) 2353101..2354072 - 972 WP_010930506.1 tripartite tricarboxylate transporter substrate binding protein -
HRJ98_RS11385 (HRJ98_11295) 2354133..2355524 - 1392 WP_232806621.1 D-aminoacylase VF
HRJ98_RS11390 (HRJ98_11300) 2355791..2356171 + 381 WP_019249653.1 helix-turn-helix domain-containing protein -
HRJ98_RS11395 (HRJ98_11305) 2356175..2357362 + 1188 WP_010930504.1 MFS transporter -
HRJ98_RS11400 (HRJ98_11310) 2357386..2357808 + 423 Protein_2234 arsenate reductase (glutaredoxin) -
HRJ98_RS11405 (HRJ98_11315) 2357801..2358523 + 723 WP_010930503.1 arsenical resistance protein ArsH -
HRJ98_RS11410 (HRJ98_11320) 2358520..2358711 - 192 WP_023852764.1 hypothetical protein -
HRJ98_RS11415 (HRJ98_11325) 2358816..2359766 + 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRJ98_RS11420 (HRJ98_11330) 2359763..2360191 - 429 WP_019249376.1 hypothetical protein -
HRJ98_RS11425 (HRJ98_11335) 2360188..2361578 - 1391 Protein_2239 Arylsulfatase VF
HRJ98_RS11430 (HRJ98_11340) 2361593..2362555 - 963 WP_003811538.1 tripartite tricarboxylate transporter substrate binding protein -
HRJ98_RS11435 (HRJ98_11345) 2362670..2363623 + 954 WP_010930502.1 LysR family transcriptional regulator -
HRJ98_RS11440 (HRJ98_11350) 2363633..2364625 - 993 WP_010930501.1 tripartite tricarboxylate transporter substrate binding protein -
HRJ98_RS11445 (HRJ98_11355) 2364677..2365408 - 732 WP_230457143.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG VF
HRJ98_RS11450 (HRJ98_11360) 2365497..2366177 - 681 WP_019248752.1 SDR family oxidoreductase -
HRJ98_RS11455 (HRJ98_11365) 2366252..2367358 + 1107 WP_023995519.1 fumarylacetoacetate hydrolase family protein -
HRJ98_RS11460 (HRJ98_11370) 2367389..2368585 + 1197 WP_010930497.1 alpha-hydroxy acid oxidase -
HRJ98_RS11465 (HRJ98_11375) 2368582..2369355 + 774 WP_010930496.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG VF
HRJ98_RS11470 (HRJ98_11380) 2369372..2370394 + 1023 WP_023852774.1 tripartite tricarboxylate transporter substrate binding protein -
HRJ98_RS11475 (HRJ98_11385) 2370480..2371424 + 945 WP_010930494.1 LysR family transcriptional regulator -
HRJ98_RS11480 (HRJ98_11390) 2371402..2372271 - 870 WP_010930493.1 TauD/TfdA family dioxygenase -
HRJ98_RS11485 (HRJ98_11395) 2372515..2373138 + 624 WP_010930492.1 glutathione S-transferase N-terminal domain-containing protein -
HRJ98_RS11490 (HRJ98_11400) 2373271..2373450 + 180 WP_225975616.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
HRJ98_RS11495 (HRJ98_11405) 2373453..2373752 + 300 WP_019247905.1 NadS family protein Antitoxin Detail
HRJ98_RS11500 (HRJ98_11410) 2373766..2376840 - 3075 WP_023995112.1 autotransporter SphB2 -
HRJ98_RS11505 (HRJ98_11415) 2376970..2377644 + 675 WP_010930489.1 putative transcriptional regulatory protein NarL VF
HRJ98_RS11510 (HRJ98_11420) 2377637..2379451 + 1815 WP_019247865.1 7TM diverse intracellular signaling domain-containing protein -
HRJ98_RS11515 (HRJ98_11425) 2379505..2380452 - 948 WP_010930487.1 hypothetical protein -
HRJ98_RS11520 (HRJ98_11430) 2380557..2381507 + 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRJ98_RS11525 (HRJ98_11435) 2381523..2381981 - 459 Protein_2259 spermidine synthase -
HRJ98_RS11530 (HRJ98_11440) 2382060..2383685 - 1626 WP_023852967.1 Arylsulfatase VF
HRJ98_RS11535 (HRJ98_11445) 2383735..2384769 - 1035 WP_010930475.1 HAD family hydrolase -
HRJ98_RS11540 (HRJ98_11450) 2384772..2386118 - 1347 WP_010930476.1 BatD family protein -
HRJ98_RS11545 (HRJ98_11455) 2386115..2387629 - 1515 WP_010930477.1 VWA domain-containing protein -
HRJ98_RS11550 (HRJ98_11460) 2387620..2388630 - 1011 WP_010930478.1 VWA domain-containing protein -
HRJ98_RS11555 (HRJ98_11465) 2388617..2389107 - 491 Protein_2265 DUF4381 domain-containing protein -
HRJ98_RS11560 (HRJ98_11470) 2389104..2390045 - 942 WP_010930479.1 DUF58 domain-containing protein -
HRJ98_RS11565 (HRJ98_11475) 2390054..2391022 - 969 WP_010930480.1 AAA family ATPase -
HRJ98_RS11570 (HRJ98_11480) 2391078..2392218 - 1141 Protein_2268 formylglycine-generating enzyme family protein -
HRJ98_RS11575 (HRJ98_11485) 2392562..2393530 + 969 WP_010930481.1 transporter -
HRJ98_RS11580 (HRJ98_11490) 2393708..2394697 + 990 WP_010930482.1 tripartite tricarboxylate transporter substrate binding protein -
HRJ98_RS11585 (HRJ98_11495) 2394744..2395502 + 759 WP_010926609.1 Dihydroanticapsin 7-dehydrogenase VF
HRJ98_RS11590 (HRJ98_11500) 2395692..2396429 + 738 WP_010930483.1 TerC family protein -
HRJ98_RS11595 (HRJ98_11505) 2396527..2397477 + 951 WP_005012808.1 IS481 family transposase IS481v2 Transposase
HRJ98_RS11600 (HRJ98_11515) 2397662..2398444 + 783 WP_003816696.1 ABC transporter ATP-binding protein -
HRJ98_RS11605 (HRJ98_11520) 2398438..2399139 + 702 WP_003810743.1 High-affinity branched-chain amino acid transport ATP-binding protein LivF VF
HRJ98_RS11610 (HRJ98_11525) 2399379..2399981 + 603 WP_003810741.1 TetR/AcrR family transcriptional regulator -
HRJ98_RS11615 (HRJ98_11530) 2399957..2400871 - 915 WP_010930484.1 FAD-dependent oxidoreductase -
HRJ98_RS11620 (HRJ98_11535) 2401308..2402258 + 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRJ98_RS11625 (HRJ98_11540) 2402255..2403811 - 1557 WP_014486074.1 hypothetical protein VF
HRJ98_RS11630 (HRJ98_11545) 2403804..2404577 - 774 WP_010930486.1 putative oxidoreductase VF
HRJ98_RS11635 (HRJ98_11550) 2404636..2405586 - 951 WP_010931070.1 IS481 family transposase IS481v1 Transposase
HRJ98_RS11640 (HRJ98_11555) 2405666..2406841 - 1176 WP_023852812.1 hypothetical protein VF
HRJ98_RS11645 (HRJ98_11560) 2406855..2408912 - 2058 WP_010930473.1 hypothetical protein VF
HRJ98_RS11650 (HRJ98_11565) 2408909..2409934 - 1026 WP_010930472.1 UDP-N-acetylglucosamine 4-epimerase VF
HRJ98_RS11655 (HRJ98_11570) 2409946..2411235 - 1290 WP_010930471.1 UDP-N-acetyl-D-glucosamine 6-dehydrogenase VF
HRJ98_RS11660 (HRJ98_11575) 2411258..2412355 - 1098 WP_010930470.1 hypothetical protein VF
HRJ98_RS11665 (HRJ98_11580) 2412352..2413236 - 885 WP_225719642.1 capsular biosynthesis protein -
HRJ98_RS11670 (HRJ98_11585) 2413239..2415323 - 2085 WP_010930469.1 Putative glycosyltransferase EpsF VF
HRJ98_RS11675 (HRJ98_11590) 2415355..2416524 - 1170 WP_010930468.1 capsule polysaccharide transporter -
HRJ98_RS11680 (HRJ98_11595) 2416566..2417306 - 741 WP_014486073.1 Polysialic acid transport ATP-binding protein KpsT VF
HRJ98_RS11685 (HRJ98_11600) 2417306..2418076 - 771 WP_010930466.1 Polysialic acid transport protein KpsM VF
HRJ98_RS11690 (HRJ98_11605) 2418401..2418568 + 168 WP_019247171.1 hypothetical protein -
HRJ98_RS11695 (HRJ98_11610) 2419080..2419715 + 636 WP_236586185.1 glycosyltransferase family A protein -
HRJ98_RS11700 (HRJ98_11615) 2419742..2421826 + 2085 WP_010930464.1 hypothetical protein -
HRJ98_RS11705 2421964..2422227 + 264 WP_227339481.1 hypothetical protein VF
HRJ98_RS11710 (HRJ98_11620) 2422206..2423948 + 1743 WP_227339482.1 capsular biosynthesis protein -
HRJ98_RS11715 (HRJ98_11625) 2424272..2424772 - 501 WP_003811209.1 DNA protection during starvation protein 2 VF
HRJ98_RS11720 (HRJ98_11630) 2424871..2426397 - 1527 WP_010930461.1 CoA-acylating methylmalonate-semialdehyde dehydrogenase -
HRJ98_RS11725 (HRJ98_11635) 2426535..2427422 + 888 WP_010930460.1 HTH-type transcriptional regulator DmlR VF
HRJ98_RS11730 (HRJ98_11640) 2427437..2428390 - 954 WP_003811203.1 Hydrogen peroxide-inducible genes activator VF
HRJ98_RS11735 (HRJ98_11645) 2428442..2430532 - 2091 WP_033446218.1 ATP-dependent DNA helicase RecG -
HRJ98_RS11740 (HRJ98_11650) 2430548..2430934 - 387 WP_010930458.1 Rid family detoxifying hydrolase -
HRJ98_RS11745 (HRJ98_11655) 2431111..2433464 - 2354 Protein_2303 Pertactin autotransporter VF
HRJ98_RS11750 (HRJ98_11660) 2433628..2434431 - 804 WP_010930457.1 2,5-didehydrogluconate reductase DkgB -
HRJ98_RS11755 (HRJ98_11665) 2434503..2435623 - 1121 Protein_2305 MFS transporter -
HRJ98_RS11760 (HRJ98_11670) 2435725..2436627 + 903 WP_010930456.1 HTH-type transcriptional regulator DmlR VF
HRJ98_RS11765 (HRJ98_11675) 2436692..2437468 - 777 WP_003811187.1 ferredoxin--NADP reductase -
HRJ98_RS11770 (HRJ98_11680) 2437790..2438839 + 1050 WP_010930455.1 Fe(3+) ABC transporter substrate-binding protein -
HRJ98_RS11775 (HRJ98_11685) 2438963..2440633 + 1671 WP_010930454.1 iron ABC transporter permease -
HRJ98_RS11780 (HRJ98_11690) 2440638..2441432 + 795 WP_019248220.1 Sulfate/thiosulfate import ATP-binding protein CysA VF
HRJ98_RS11785 (HRJ98_11695) 2441531..2442481 + 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRJ98_RS11790 (HRJ98_11700) 2442501..2443406 - 906 WP_010930453.1 pirin family protein -
HRJ98_RS11795 (HRJ98_11705) 2443484..2444182 - 699 WP_003811176.1 pirin family protein -
HRJ98_RS11800 (HRJ98_11710) 2444326..2445285 + 960 WP_235610868.1 HTH-type transcriptional regulator YhaJ VF
HRJ98_RS11805 (HRJ98_11715) 2445295..2446782 - 1488 WP_010930451.1 DNA-binding transcriptional regulator NtrC VF
HRJ98_RS11810 (HRJ98_11720) 2446782..2447849 - 1068 WP_003811167.1 nitrogen regulation protein NR(II) -
HRJ98_RS11815 (HRJ98_11725) 2447913..2449325 - 1413 WP_003811164.1 type I glutamate--ammonia ligase -
HRJ98_RS11820 (HRJ98_11730) 2449511..2450731 - 1221 WP_010930450.1 Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR VF
HRJ98_RS11825 (HRJ98_11735) 2450753..2451703 - 951 WP_005012808.1 IS481 family transposase IS481v2 Transposase
HRJ98_RS11830 (HRJ98_11740) 2451801..2452442 - 642 WP_010930449.1 dITP/XTP pyrophosphatase VF
HRJ98_RS11835 (HRJ98_11745) 2452569..2454371 + 1803 WP_010930448.1 EAL domain-containing protein -
HRJ98_RS11840 (HRJ98_11750) 2454510..2455940 - 1431 Protein_2322 Methyl-accepting chemotaxis protein I VF
HRJ98_RS11845 (HRJ98_11755) 2456023..2456928 - 906 WP_003811152.1 LysR family transcriptional regulator -
HRJ98_RS11850 (HRJ98_11760) 2457110..2458486 + 1377 WP_010930446.1 MmgE/PrpD family protein -
HRJ98_RS11855 (HRJ98_11765) 2458653..2459393 - 741 WP_003811149.1 ribonuclease PH -
HRJ98_RS11860 (HRJ98_11770) 2459530..2460456 + 927 WP_003811148.1 YicC/YloC family endoribonuclease -
HRJ98_RS11865 (HRJ98_11775) 2460729..2460884 + 156 WP_010930445.1 hypothetical protein -
HRJ98_RS19825 2460897..2461025 + 129 WP_010928840.1 hypothetical protein -
HRJ98_RS11870 (HRJ98_11780) 2461022..2461306 + 285 WP_010926696.1 helix-turn-helix domain-containing protein -
HRJ98_RS11875 (HRJ98_11785) 2461365..2462855 - 1491 WP_003811138.1 AMP nucleosidase -
HRJ98_RS11880 (HRJ98_11790) 2463100..2463699 + 600 WP_003811137.1 Murein DD-endopeptidase MepH VF
HRJ98_RS11885 (HRJ98_11795) 2463704..2464474 - 771 WP_003811135.1 3-beta-hydroxycholanate 3-dehydrogenase (NADP(+)) VF
HRJ98_RS11890 (HRJ98_11800) 2464712..2465425 + 714 WP_010930444.1 Cytochrome c4 VF
HRJ98_RS11895 (HRJ98_11805) 2465422..2466339 + 918 WP_010930443.1 c-type cytochrome -
HRJ98_RS11900 (HRJ98_11810) 2466475..2467107 + 633 WP_010930442.1 guanylate kinase -
HRJ98_RS11905 (HRJ98_11815) 2467149..2467352 + 204 WP_010930441.1 DNA-directed RNA polymerase subunit omega -
HRJ98_RS11910 (HRJ98_11820) 2467377..2469656 + 2280 WP_010930440.1 Bifunctional (p)ppGpp synthase/hydrolase SpoT VF
HRJ98_RS11915 (HRJ98_11825) 2469669..2470397 - 729 WP_003811113.1 Glutamine transport ATP-binding protein GlnQ VF
HRJ98_RS11920 (HRJ98_11830) 2470394..2471053 - 660 WP_003811112.1 glutamine ABC transporter permease GlnP -
HRJ98_RS11925 (HRJ98_11835) 2471122..2471874 - 753 WP_010930439.1 glutamine ABC transporter substrate-binding protein GlnH -
HRJ98_RS11930 (HRJ98_11840) 2472056..2473006 - 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRJ98_RS11935 (HRJ98_11845) 2473163..2473811 + 649 Protein_2342 site-2 protease family protein -
HRJ98_RS11940 (HRJ98_11850) 2473897..2474802 + 906 WP_033446216.1 4-hydroxy-tetrahydrodipicolinate synthase -
HRJ98_RS11945 (HRJ98_11855) 2474814..2475941 + 1128 WP_010930437.1 outer membrane protein assembly factor BamC -
HRJ98_RS11950 (HRJ98_11860) 2476030..2476644 - 615 WP_010930436.1 Major fimbrial subunit SMF-1 VF
HRJ98_RS11955 (HRJ98_11865) 2476691..2477026 - 336 WP_240076245.1 hypothetical protein -
HRJ98_RS11960 (HRJ98_11870) 2477295..2478482 - 1188 WP_010930435.1 cupin domain-containing protein -
HRJ98_RS11965 (HRJ98_11875) 2478479..2481076 - 2598 WP_033446228.1 DNA mismatch repair protein MutS -
HRJ98_RS11970 (HRJ98_11880) 2481331..2481546 + 216 WP_010930433.1 dodecin family protein -
HRJ98_RS11975 (HRJ98_11885) 2482002..2482556 - 555 WP_010930432.1 NAD(P)H-dependent oxidoreductase -
HRJ98_RS11980 (HRJ98_11890) 2482823..2483383 + 561 WP_010930431.1 membrane protein -
HRJ98_RS11985 (HRJ98_11895) 2483495..2484799 + 1305 WP_023853587.1 imelysin family protein -
HRJ98_RS11990 (HRJ98_11900) 2484796..2486307 + 1512 WP_019247498.1 di-heme oxidoredictase family protein -
HRJ98_RS11995 (HRJ98_11905) 2486359..2487414 + 1056 WP_224019495.1 imelysin family protein -
HRJ98_RS12000 (HRJ98_11910) 2487404..2488516 + 1113 WP_019249265.1 DUF1513 domain-containing protein -
HRJ98_RS12005 (HRJ98_11915) 2488615..2489565 + 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRJ98_RS12010 (HRJ98_11920) 2489562..2490188 - 627 WP_010928449.1 L-threonylcarbamoyladenylate synthase -
HRJ98_RS12015 (HRJ98_11925) 2490248..2491099 + 852 WP_010930427.1 neutral zinc metallopeptidase -
HRJ98_RS12020 (HRJ98_11930) 2491203..2491802 + 600 WP_010930426.1 hypothetical protein -
HRJ98_RS12025 (HRJ98_11935) 2491799..2492563 + 765 WP_010930425.1 hypothetical protein -
HRJ98_RS12030 (HRJ98_11940) 2492633..2493583 - 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRJ98_RS12035 (HRJ98_11945) 2493682..2494290 - 609 WP_010930424.1 recombination mediator RecR -
HRJ98_RS12040 (HRJ98_11950) 2494341..2494667 - 327 WP_010930423.1 YbaB/EbfC family nucleoid-associated protein -
HRJ98_RS12045 (HRJ98_11955) 2494714..2496804 - 2091 WP_010930422.1 DNA polymerase III subunit gamma/tau -
HRJ98_RS12055 (HRJ98_11965) 2497600..2501004 - 3405 WP_010930421.1 UvrD-helicase domain-containing protein -
HRJ98_RS12060 (HRJ98_11970) 2501017..2503677 - 2661 WP_010930420.1 PD-(D/E)XK nuclease family protein -
HRJ98_RS12065 (HRJ98_11975) 2503699..2503845 - 147 WP_004568212.1 hypothetical protein -
HRJ98_RS12070 (HRJ98_11980) 2503881..2505083 - 1203 WP_010930419.1 MFS transporter -
HRJ98_RS12080 (HRJ98_11990) 2505770..2506882 + 1113 WP_023994932.1 D-alanyl-D-alanine endopeptidase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance