MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 161603 bp
Accession: NZ_CP054084        Location: 2344495..2506097         Organism: Bordetella pertussis strain NZ47       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HRJ99_RS11375 (HRJ99_11305) 2339692..2341593 + 1902 WP_010930517.1 TRAP transporter large permease subunit -
HRJ99_RS11380 (HRJ99_11310) 2341642..2342436 + 795 WP_010930516.1 enoyl-CoA hydratase/isomerase family protein -
HRJ99_RS11385 (HRJ99_11315) 2342449..2343450 - 1002 WP_010930515.1 LD-carboxypeptidase -
HRJ99_RS11390 (HRJ99_11320) 2343447..2343953 - 507 WP_004568494.1 tRNA adenosine(34) deaminase TadA -
HRJ99_RS11395 (HRJ99_11325) 2343946..2344794 - 849 WP_010930513.1 HAD family hydrolase -
HRJ99_RS11400 (HRJ99_11330) 2344892..2345434 - 543 WP_019247780.1 hypothetical protein -
HRJ99_RS11405 (HRJ99_11335) 2345478..2346428 - 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRJ99_RS11410 (HRJ99_11340) 2346584..2346910 - 327 WP_010930511.1 monovalent cation/H(+) antiporter subunit G -
HRJ99_RS11415 (HRJ99_11345) 2346907..2347191 - 285 WP_003810975.1 K+/H+ antiporter subunit F -
HRJ99_RS11420 (HRJ99_11350) 2347188..2347667 - 480 WP_010930510.1 Na+/H+ antiporter subunit E -
HRJ99_RS11425 (HRJ99_11355) 2347664..2349292 - 1629 WP_004568496.1 monovalent cation/H+ antiporter subunit D -
HRJ99_RS11430 (HRJ99_11360) 2349289..2349633 - 345 WP_003810969.1 Na+/H+ antiporter subunit C -
HRJ99_RS11435 (HRJ99_11365) 2349633..2352566 - 2934 WP_010930509.1 monovalent cation/H+ antiporter subunit A -
HRJ99_RS11440 (HRJ99_11370) 2352988..2353725 + 738 Protein_2251 tripartite tricarboxylate transporter substrate-binding protein -
HRJ99_RS11445 (HRJ99_11375) 2353725..2354675 - 951 WP_010930208.1 IS481 family transposase IS481v2 Transposase
HRJ99_RS11450 (HRJ99_11380) 2354774..2355070 - 297 WP_003811452.1 hypothetical protein -
HRJ99_RS11455 (HRJ99_11385) 2355192..2356094 + 903 WP_023995058.1 hypothetical protein VF
HRJ99_RS11460 (HRJ99_11390) 2356099..2356812 - 714 WP_010930507.1 hypothetical protein VF
HRJ99_RS11465 (HRJ99_11395) 2356826..2357797 - 972 WP_010930506.1 tripartite tricarboxylate transporter substrate binding protein -
HRJ99_RS11470 (HRJ99_11400) 2357922..2359250 - 1329 Protein_2257 amidohydrolase family protein -
HRJ99_RS11475 (HRJ99_11405) 2359517..2359897 + 381 WP_019249653.1 helix-turn-helix domain-containing protein -
HRJ99_RS11480 (HRJ99_11410) 2359901..2361088 + 1188 WP_010930504.1 MFS transporter -
HRJ99_RS11485 (HRJ99_11415) 2361112..2361534 + 423 Protein_2260 arsenate reductase (glutaredoxin) -
HRJ99_RS11490 (HRJ99_11420) 2361527..2362249 + 723 WP_010930503.1 arsenical resistance protein ArsH -
HRJ99_RS11495 (HRJ99_11425) 2362246..2362437 - 192 WP_023852764.1 hypothetical protein -
HRJ99_RS11500 (HRJ99_11430) 2362543..2363493 + 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRJ99_RS11505 (HRJ99_11435) 2363490..2363918 - 429 WP_019249376.1 hypothetical protein -
HRJ99_RS11510 (HRJ99_11440) 2363915..2365305 - 1391 Protein_2265 hypothetical protein VF
HRJ99_RS11515 (HRJ99_11445) 2365320..2366282 - 963 WP_003811538.1 tripartite tricarboxylate transporter substrate binding protein -
HRJ99_RS11520 (HRJ99_11450) 2366398..2367351 + 954 WP_010930502.1 LysR family transcriptional regulator -
HRJ99_RS11525 (HRJ99_11455) 2367361..2368353 - 993 WP_010930501.1 tripartite tricarboxylate transporter substrate binding protein -
HRJ99_RS11530 (HRJ99_11460) 2368405..2369136 - 732 WP_230457143.1 hypothetical protein VF
HRJ99_RS11535 (HRJ99_11465) 2369225..2369914 - 690 WP_010930499.1 SDR family oxidoreductase -
HRJ99_RS11540 (HRJ99_11470) 2369995..2371086 + 1092 WP_023997526.1 fumarylacetoacetate hydrolase family protein -
HRJ99_RS11545 (HRJ99_11475) 2371117..2372313 + 1197 WP_010930497.1 alpha-hydroxy acid oxidase -
HRJ99_RS11550 (HRJ99_11480) 2372310..2373083 + 774 WP_010930496.1 hypothetical protein VF
HRJ99_RS11555 (HRJ99_11485) 2373100..2374122 + 1023 WP_023852774.1 tripartite tricarboxylate transporter substrate binding protein -
HRJ99_RS11560 (HRJ99_11490) 2374208..2375152 + 945 WP_010930494.1 LysR family transcriptional regulator -
HRJ99_RS11565 (HRJ99_11495) 2375130..2375999 - 870 WP_010930493.1 TauD/TfdA family dioxygenase -
HRJ99_RS11570 (HRJ99_11500) 2376243..2376866 + 624 WP_010930492.1 glutathione S-transferase N-terminal domain-containing protein -
HRJ99_RS11575 (HRJ99_11505) 2376999..2377178 + 180 WP_225975616.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
HRJ99_RS11580 (HRJ99_11510) 2377181..2377480 + 300 WP_019247905.1 NadS family protein Antitoxin Detail
HRJ99_RS11585 (HRJ99_11515) 2377494..2380568 - 3075 WP_023995112.1 autotransporter SphB2 -
HRJ99_RS11590 (HRJ99_11520) 2380698..2381372 + 675 WP_010930489.1 hypothetical protein VF
HRJ99_RS11595 (HRJ99_11525) 2381365..2383179 + 1815 WP_019247865.1 7TM diverse intracellular signaling domain-containing protein -
HRJ99_RS11600 (HRJ99_11530) 2383233..2384180 - 948 WP_010930487.1 hypothetical protein -
HRJ99_RS11605 (HRJ99_11535) 2384285..2385235 + 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRJ99_RS11610 (HRJ99_11540) 2385251..2385709 - 459 Protein_2285 spermidine synthase -
HRJ99_RS11615 (HRJ99_11545) 2385788..2387413 - 1626 WP_023852967.1 hypothetical protein VF
HRJ99_RS11620 (HRJ99_11550) 2387463..2388497 - 1035 WP_010930475.1 HAD family hydrolase -
HRJ99_RS11625 (HRJ99_11555) 2388500..2389846 - 1347 WP_010930476.1 BatD family protein -
HRJ99_RS11630 (HRJ99_11560) 2389843..2391357 - 1515 WP_010930477.1 VWA domain-containing protein -
HRJ99_RS11635 (HRJ99_11565) 2391348..2392358 - 1011 WP_010930478.1 VWA domain-containing protein -
HRJ99_RS11640 (HRJ99_11570) 2392345..2392835 - 491 Protein_2291 DUF4381 domain-containing protein -
HRJ99_RS11645 (HRJ99_11575) 2392832..2393773 - 942 WP_010930479.1 DUF58 domain-containing protein -
HRJ99_RS11650 (HRJ99_11580) 2393782..2394750 - 969 WP_010930480.1 AAA family ATPase -
HRJ99_RS11655 (HRJ99_11585) 2394806..2395946 - 1141 Protein_2294 formylglycine-generating enzyme family protein -
HRJ99_RS11660 (HRJ99_11590) 2396290..2397258 + 969 WP_010930481.1 transporter -
HRJ99_RS11665 (HRJ99_11595) 2397436..2398425 + 990 WP_010930482.1 tripartite tricarboxylate transporter substrate binding protein -
HRJ99_RS11670 (HRJ99_11600) 2398472..2399230 + 759 WP_010926609.1 hypothetical protein VF
HRJ99_RS11675 (HRJ99_11605) 2399420..2400157 + 738 WP_010930483.1 TerC family protein -
HRJ99_RS11680 (HRJ99_11610) 2400256..2401206 + 951 WP_005012808.1 IS481 family transposase IS481v2 Transposase
HRJ99_RS11685 (HRJ99_11620) 2401391..2402173 + 783 WP_003816696.1 ABC transporter ATP-binding protein -
HRJ99_RS11690 (HRJ99_11625) 2402167..2402868 + 702 WP_003810743.1 hypothetical protein VF
HRJ99_RS11695 (HRJ99_11630) 2403108..2403710 + 603 WP_003810741.1 TetR/AcrR family transcriptional regulator -
HRJ99_RS11700 (HRJ99_11635) 2403686..2404600 - 915 WP_010930484.1 FAD-dependent oxidoreductase -
HRJ99_RS11705 (HRJ99_11640) 2405037..2405987 + 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRJ99_RS11710 (HRJ99_11645) 2405984..2407540 - 1557 WP_014486074.1 hypothetical protein VF
HRJ99_RS11715 (HRJ99_11650) 2407533..2408306 - 774 WP_010930486.1 hypothetical protein VF
HRJ99_RS11720 (HRJ99_11655) 2408365..2409315 - 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRJ99_RS11725 (HRJ99_11660) 2409397..2410572 - 1176 WP_023852812.1 hypothetical protein VF
HRJ99_RS11730 (HRJ99_11665) 2410586..2412643 - 2058 WP_010930473.1 hypothetical protein VF
HRJ99_RS11735 (HRJ99_11670) 2412640..2413665 - 1026 WP_010930472.1 hypothetical protein VF
HRJ99_RS11740 (HRJ99_11675) 2413677..2414966 - 1290 WP_010930471.1 hypothetical protein VF
HRJ99_RS11745 (HRJ99_11680) 2414989..2416086 - 1098 WP_010930470.1 hypothetical protein VF
HRJ99_RS11750 (HRJ99_11685) 2416083..2416973 - 891 WP_003811224.1 capsular polysaccharide biosynthesis protein -
HRJ99_RS11755 (HRJ99_11690) 2416970..2419054 - 2085 WP_010930469.1 hypothetical protein VF
HRJ99_RS11760 (HRJ99_11695) 2419086..2420255 - 1170 WP_010930468.1 capsule polysaccharide transporter -
HRJ99_RS11765 (HRJ99_11700) 2420297..2421037 - 741 WP_014486073.1 hypothetical protein VF
HRJ99_RS11770 (HRJ99_11705) 2421037..2421807 - 771 WP_010930466.1 hypothetical protein VF
HRJ99_RS11775 (HRJ99_11710) 2422132..2422299 + 168 WP_019247171.1 hypothetical protein -
HRJ99_RS11780 (HRJ99_11715) 2422567..2423448 + 882 WP_023995078.1 hypothetical protein VF
HRJ99_RS11785 (HRJ99_11720) 2423475..2425559 + 2085 WP_010930464.1 hypothetical protein -
HRJ99_RS11790 (HRJ99_11725) 2425697..2427682 + 1986 WP_010930463.1 hypothetical protein VF
HRJ99_RS11795 (HRJ99_11730) 2428006..2428506 - 501 WP_003811209.1 hypothetical protein VF
HRJ99_RS11800 (HRJ99_11735) 2428605..2430131 - 1527 WP_010930461.1 CoA-acylating methylmalonate-semialdehyde dehydrogenase -
HRJ99_RS11805 (HRJ99_11740) 2430269..2431156 + 888 WP_010930460.1 hypothetical protein VF
HRJ99_RS11810 (HRJ99_11745) 2431171..2432124 - 954 WP_003811203.1 hypothetical protein VF
HRJ99_RS11815 (HRJ99_11750) 2432176..2434266 - 2091 WP_033446218.1 ATP-dependent DNA helicase RecG -
HRJ99_RS11820 (HRJ99_11755) 2434282..2434668 - 387 WP_010930458.1 Rid family detoxifying hydrolase -
HRJ99_RS11825 (HRJ99_11760) 2434845..2437198 - 2354 Protein_2328 hypothetical protein VF
HRJ99_RS11830 (HRJ99_11765) 2437362..2438165 - 804 WP_010930457.1 2,5-didehydrogluconate reductase DkgB -
HRJ99_RS11835 (HRJ99_11770) 2438237..2439357 - 1121 Protein_2330 MFS transporter -
HRJ99_RS11840 (HRJ99_11775) 2439459..2440361 + 903 WP_010930456.1 hypothetical protein VF
HRJ99_RS11845 (HRJ99_11780) 2440426..2441202 - 777 WP_003811187.1 ferredoxin--NADP reductase -
HRJ99_RS11850 (HRJ99_11785) 2441524..2442573 + 1050 WP_010930455.1 Fe(3+) ABC transporter substrate-binding protein -
HRJ99_RS11855 (HRJ99_11790) 2442697..2444367 + 1671 WP_010930454.1 iron ABC transporter permease -
HRJ99_RS11860 (HRJ99_11795) 2444372..2445166 + 795 WP_019248220.1 hypothetical protein VF
HRJ99_RS11865 (HRJ99_11800) 2445265..2446215 + 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRJ99_RS11870 (HRJ99_11805) 2446235..2447140 - 906 WP_010930453.1 pirin family protein -
HRJ99_RS11875 (HRJ99_11810) 2447218..2447916 - 699 WP_003811176.1 pirin family protein -
HRJ99_RS11880 (HRJ99_11815) 2448076..2449020 + 945 WP_010930452.1 hypothetical protein VF
HRJ99_RS11885 (HRJ99_11820) 2449030..2450517 - 1488 WP_010930451.1 hypothetical protein VF
HRJ99_RS11890 (HRJ99_11825) 2450517..2451584 - 1068 WP_003811167.1 nitrogen regulation protein NR(II) -
HRJ99_RS11895 (HRJ99_11830) 2451648..2453060 - 1413 WP_003811164.1 type I glutamate--ammonia ligase -
HRJ99_RS11900 (HRJ99_11835) 2453246..2454466 - 1221 WP_010930450.1 hypothetical protein VF
HRJ99_RS11905 (HRJ99_11840) 2454488..2455438 - 951 WP_005012808.1 IS481 family transposase IS481v2 Transposase
HRJ99_RS11910 (HRJ99_11845) 2455537..2456178 - 642 WP_010930449.1 hypothetical protein VF
HRJ99_RS11915 (HRJ99_11850) 2456305..2458107 + 1803 WP_010930448.1 EAL domain-containing protein -
HRJ99_RS11920 (HRJ99_11855) 2458246..2459676 - 1431 Protein_2347 hypothetical protein VF
HRJ99_RS11925 (HRJ99_11860) 2459759..2460664 - 906 WP_003811152.1 LysR family transcriptional regulator -
HRJ99_RS11930 (HRJ99_11865) 2460846..2462222 + 1377 WP_010930446.1 MmgE/PrpD family protein -
HRJ99_RS11935 (HRJ99_11870) 2462389..2463129 - 741 WP_003811149.1 ribonuclease PH -
HRJ99_RS11940 (HRJ99_11875) 2463266..2464192 + 927 WP_003811148.1 YicC/YloC family endoribonuclease -
HRJ99_RS11945 (HRJ99_11880) 2464465..2464620 + 156 WP_010930445.1 hypothetical protein -
HRJ99_RS19980 2464633..2464761 + 129 WP_010928840.1 hypothetical protein -
HRJ99_RS11950 (HRJ99_11885) 2464758..2465042 + 285 WP_010926696.1 helix-turn-helix domain-containing protein -
HRJ99_RS11955 (HRJ99_11890) 2465101..2466591 - 1491 WP_003811138.1 AMP nucleosidase -
HRJ99_RS11960 (HRJ99_11895) 2466836..2467435 + 600 WP_003811137.1 hypothetical protein VF
HRJ99_RS11965 (HRJ99_11900) 2467440..2468210 - 771 WP_003811135.1 hypothetical protein VF
HRJ99_RS11970 (HRJ99_11905) 2468448..2469161 + 714 WP_010930444.1 hypothetical protein VF
HRJ99_RS11975 (HRJ99_11910) 2469158..2470075 + 918 WP_010930443.1 c-type cytochrome -
HRJ99_RS11980 (HRJ99_11915) 2470211..2470843 + 633 WP_010930442.1 guanylate kinase -
HRJ99_RS11985 (HRJ99_11920) 2470885..2471088 + 204 WP_010930441.1 DNA-directed RNA polymerase subunit omega -
HRJ99_RS11990 (HRJ99_11925) 2471113..2473392 + 2280 WP_010930440.1 hypothetical protein VF
HRJ99_RS11995 (HRJ99_11930) 2473405..2474133 - 729 WP_003811113.1 hypothetical protein VF
HRJ99_RS12000 (HRJ99_11935) 2474130..2474789 - 660 WP_003811112.1 glutamine ABC transporter permease GlnP -
HRJ99_RS12005 (HRJ99_11940) 2474858..2475610 - 753 WP_010930439.1 glutamine ABC transporter substrate-binding protein GlnH -
HRJ99_RS12010 (HRJ99_11945) 2475792..2476742 - 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRJ99_RS12015 (HRJ99_11950) 2476901..2477549 + 649 Protein_2367 site-2 protease family protein -
HRJ99_RS12020 (HRJ99_11955) 2477635..2478540 + 906 WP_033446216.1 4-hydroxy-tetrahydrodipicolinate synthase -
HRJ99_RS12025 (HRJ99_11960) 2478552..2479679 + 1128 WP_010930437.1 outer membrane protein assembly factor BamC -
HRJ99_RS12030 (HRJ99_11965) 2479768..2480382 - 615 WP_010930436.1 hypothetical protein VF
HRJ99_RS12035 (HRJ99_11970) 2481038..2482225 - 1188 WP_010930435.1 cupin domain-containing protein -
HRJ99_RS12040 (HRJ99_11975) 2482222..2484819 - 2598 WP_033446228.1 DNA mismatch repair protein MutS -
HRJ99_RS12045 (HRJ99_11980) 2485074..2485289 + 216 WP_010930433.1 dodecin family protein -
HRJ99_RS12050 (HRJ99_11985) 2485745..2486299 - 555 WP_010930432.1 NAD(P)H-dependent oxidoreductase -
HRJ99_RS12055 (HRJ99_11990) 2486567..2487127 + 561 WP_010930431.1 membrane protein -
HRJ99_RS12060 (HRJ99_11995) 2487239..2488543 + 1305 WP_023853587.1 imelysin family protein -
HRJ99_RS12065 (HRJ99_12000) 2488540..2490051 + 1512 WP_019247498.1 di-heme oxidoredictase family protein -
HRJ99_RS12070 (HRJ99_12005) 2490103..2491158 + 1056 WP_224019495.1 imelysin family protein -
HRJ99_RS12075 (HRJ99_12010) 2491148..2492260 + 1113 WP_019249265.1 DUF1513 domain-containing protein -
HRJ99_RS12080 (HRJ99_12015) 2492359..2493309 + 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRJ99_RS12085 (HRJ99_12020) 2493306..2493932 - 627 WP_010928449.1 L-threonylcarbamoyladenylate synthase -
HRJ99_RS12090 (HRJ99_12025) 2493992..2494843 + 852 WP_010930427.1 neutral zinc metallopeptidase -
HRJ99_RS12095 (HRJ99_12030) 2494947..2495546 + 600 WP_010930426.1 hypothetical protein -
HRJ99_RS12100 (HRJ99_12035) 2495543..2496307 + 765 WP_010930425.1 hypothetical protein -
HRJ99_RS12105 (HRJ99_12040) 2496377..2497327 - 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRJ99_RS12110 (HRJ99_12045) 2497426..2498034 - 609 WP_010930424.1 recombination mediator RecR -
HRJ99_RS12115 (HRJ99_12050) 2498085..2498411 - 327 WP_010930423.1 YbaB/EbfC family nucleoid-associated protein -
HRJ99_RS12120 (HRJ99_12055) 2498458..2500548 - 2091 WP_010930422.1 DNA polymerase III subunit gamma/tau -
HRJ99_RS12130 (HRJ99_12065) 2501351..2504755 - 3405 WP_010930421.1 UvrD-helicase domain-containing protein -
HRJ99_RS12135 (HRJ99_12070) 2504768..2507428 - 2661 WP_010930420.1 PD-(D/E)XK nuclease family protein -
HRJ99_RS12140 (HRJ99_12075) 2507450..2507596 - 147 WP_004568212.1 hypothetical protein -
HRJ99_RS12145 (HRJ99_12080) 2507632..2508834 - 1203 WP_010930419.1 MFS transporter -
HRJ99_RS12155 (HRJ99_12090) 2509521..2510633 + 1113 WP_023994932.1 D-alanyl-D-alanine endopeptidase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance