MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 161586 bp
Accession: NZ_CP054079 Location: 2344423..2506008 Organism: Bordetella pertussis strain NZ52 Replicon: chromosome
Accession: NZ_CP054079 Location: 2344423..2506008 Organism: Bordetella pertussis strain NZ52 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
HRK07_RS11365 (HRK07_11290) | 2339620..2341521 | + | 1902 | WP_010930517.1 | TRAP transporter large permease subunit | - |
HRK07_RS11370 (HRK07_11295) | 2341570..2342364 | + | 795 | WP_010930516.1 | enoyl-CoA hydratase/isomerase family protein | - |
HRK07_RS11375 (HRK07_11300) | 2342377..2343378 | - | 1002 | WP_010930515.1 | LD-carboxypeptidase | - |
HRK07_RS11380 (HRK07_11305) | 2343375..2343881 | - | 507 | WP_004568494.1 | tRNA adenosine(34) deaminase TadA | - |
HRK07_RS11385 (HRK07_11310) | 2343874..2344722 | - | 849 | WP_010930513.1 | HAD family hydrolase | - |
HRK07_RS11390 (HRK07_11315) | 2344820..2345362 | - | 543 | WP_019247780.1 | hypothetical protein | - |
HRK07_RS11395 (HRK07_11320) | 2345406..2346356 | - | 951 | WP_005013747.1 | IS481 family transposase IS481 | Transposase |
HRK07_RS11400 (HRK07_11325) | 2346512..2346838 | - | 327 | WP_010930511.1 | monovalent cation/H(+) antiporter subunit G | - |
HRK07_RS11405 (HRK07_11330) | 2346835..2347119 | - | 285 | WP_003810975.1 | K+/H+ antiporter subunit F | - |
HRK07_RS11410 (HRK07_11335) | 2347116..2347595 | - | 480 | WP_010930510.1 | Na+/H+ antiporter subunit E | - |
HRK07_RS11415 (HRK07_11340) | 2347592..2349220 | - | 1629 | WP_004568496.1 | monovalent cation/H+ antiporter subunit D | - |
HRK07_RS11420 (HRK07_11345) | 2349217..2349561 | - | 345 | WP_003810969.1 | Na+/H+ antiporter subunit C | - |
HRK07_RS11425 (HRK07_11350) | 2349561..2352494 | - | 2934 | WP_010930509.1 | monovalent cation/H+ antiporter subunit A | - |
HRK07_RS11430 (HRK07_11355) | 2352916..2353653 | + | 738 | Protein_2249 | tripartite tricarboxylate transporter substrate-binding protein | - |
HRK07_RS11435 (HRK07_11360) | 2353653..2354603 | - | 951 | WP_010929588.1 | IS481 family transposase IS481v1 | Transposase |
HRK07_RS11440 (HRK07_11365) | 2354702..2354998 | - | 297 | WP_003811452.1 | hypothetical protein | - |
HRK07_RS11445 (HRK07_11370) | 2355120..2356022 | + | 903 | WP_023995058.1 | hypothetical protein | VF |
HRK07_RS11450 (HRK07_11375) | 2356027..2356740 | - | 714 | WP_010930507.1 | hypothetical protein | VF |
HRK07_RS11455 (HRK07_11380) | 2356754..2357725 | - | 972 | WP_010930506.1 | tripartite tricarboxylate transporter substrate binding protein | - |
HRK07_RS11460 (HRK07_11385) | 2357850..2359178 | - | 1329 | Protein_2255 | amidohydrolase family protein | - |
HRK07_RS11465 (HRK07_11390) | 2359445..2359825 | + | 381 | WP_019249653.1 | helix-turn-helix domain-containing protein | - |
HRK07_RS11470 (HRK07_11395) | 2359829..2361016 | + | 1188 | WP_010930504.1 | MFS transporter | - |
HRK07_RS11475 (HRK07_11400) | 2361040..2361462 | + | 423 | Protein_2258 | arsenate reductase (glutaredoxin) | - |
HRK07_RS11480 (HRK07_11405) | 2361455..2362177 | + | 723 | WP_010930503.1 | arsenical resistance protein ArsH | - |
HRK07_RS11485 (HRK07_11410) | 2362174..2362362 | - | 189 | WP_033455115.1 | hypothetical protein | - |
HRK07_RS11490 (HRK07_11415) | 2362471..2363421 | + | 951 | WP_005013747.1 | IS481 family transposase IS481 | Transposase |
HRK07_RS11495 (HRK07_11420) | 2363418..2363846 | - | 429 | WP_019249376.1 | hypothetical protein | - |
HRK07_RS11500 (HRK07_11425) | 2363843..2365233 | - | 1391 | Protein_2263 | hypothetical protein | VF |
HRK07_RS11505 (HRK07_11430) | 2365248..2366210 | - | 963 | WP_003811538.1 | tripartite tricarboxylate transporter substrate binding protein | - |
HRK07_RS11510 (HRK07_11435) | 2366326..2367279 | + | 954 | WP_010930502.1 | LysR family transcriptional regulator | - |
HRK07_RS11515 (HRK07_11440) | 2367289..2368281 | - | 993 | WP_010930501.1 | tripartite tricarboxylate transporter substrate binding protein | - |
HRK07_RS11520 (HRK07_11445) | 2368333..2369088 | - | 756 | WP_010930500.1 | hypothetical protein | VF |
HRK07_RS11525 (HRK07_11450) | 2369153..2369842 | - | 690 | WP_010930499.1 | SDR family oxidoreductase | - |
HRK07_RS11530 (HRK07_11455) | 2369923..2371014 | + | 1092 | WP_023997526.1 | fumarylacetoacetate hydrolase family protein | - |
HRK07_RS11535 (HRK07_11460) | 2371045..2372241 | + | 1197 | WP_010930497.1 | alpha-hydroxy acid oxidase | - |
HRK07_RS11540 (HRK07_11465) | 2372238..2373011 | + | 774 | WP_010930496.1 | hypothetical protein | VF |
HRK07_RS11545 (HRK07_11470) | 2373028..2374050 | + | 1023 | WP_023852774.1 | tripartite tricarboxylate transporter substrate binding protein | - |
HRK07_RS11550 (HRK07_11475) | 2374136..2375080 | + | 945 | WP_010930494.1 | LysR family transcriptional regulator | - |
HRK07_RS11555 (HRK07_11480) | 2375058..2375927 | - | 870 | WP_010930493.1 | TauD/TfdA family dioxygenase | - |
HRK07_RS11560 (HRK07_11485) | 2376171..2376794 | + | 624 | WP_010930492.1 | glutathione S-transferase N-terminal domain-containing protein | - |
HRK07_RS11565 (HRK07_11490) | 2376927..2377106 | + | 180 | WP_225975616.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
HRK07_RS11570 (HRK07_11495) | 2377109..2377408 | + | 300 | WP_019247905.1 | NadS family protein | Antitoxin Detail |
HRK07_RS11575 (HRK07_11500) | 2377422..2380496 | - | 3075 | WP_023995112.1 | autotransporter SphB2 | - |
HRK07_RS11580 (HRK07_11505) | 2380626..2381300 | + | 675 | WP_010930489.1 | hypothetical protein | VF |
HRK07_RS11585 (HRK07_11510) | 2381293..2383107 | + | 1815 | WP_019247865.1 | 7TM diverse intracellular signaling domain-containing protein | - |
HRK07_RS11590 (HRK07_11515) | 2383161..2384108 | - | 948 | WP_010930487.1 | hypothetical protein | - |
HRK07_RS11595 (HRK07_11520) | 2384213..2385163 | + | 951 | WP_005012067.1 | IS481 family transposase IS481v2 | Transposase |
HRK07_RS11600 (HRK07_11525) | 2385179..2385637 | - | 459 | Protein_2283 | spermidine synthase | - |
HRK07_RS11605 (HRK07_11530) | 2385716..2387341 | - | 1626 | WP_023852967.1 | hypothetical protein | VF |
HRK07_RS11610 (HRK07_11535) | 2387391..2388425 | - | 1035 | WP_010930475.1 | HAD family hydrolase | - |
HRK07_RS11615 (HRK07_11540) | 2388428..2389774 | - | 1347 | WP_010930476.1 | BatD family protein | - |
HRK07_RS11620 (HRK07_11545) | 2389771..2391285 | - | 1515 | WP_010930477.1 | VWA domain-containing protein | - |
HRK07_RS11625 (HRK07_11550) | 2391276..2392286 | - | 1011 | WP_010930478.1 | VWA domain-containing protein | - |
HRK07_RS11630 (HRK07_11555) | 2392273..2392763 | - | 491 | Protein_2289 | DUF4381 domain-containing protein | - |
HRK07_RS11635 (HRK07_11560) | 2392760..2393701 | - | 942 | WP_010930479.1 | DUF58 domain-containing protein | - |
HRK07_RS11640 (HRK07_11565) | 2393710..2394678 | - | 969 | WP_010930480.1 | AAA family ATPase | - |
HRK07_RS11645 (HRK07_11570) | 2394734..2395874 | - | 1141 | Protein_2292 | formylglycine-generating enzyme family protein | - |
HRK07_RS11650 (HRK07_11575) | 2396218..2397186 | + | 969 | WP_010930481.1 | transporter | - |
HRK07_RS11655 (HRK07_11580) | 2397364..2398353 | + | 990 | WP_010930482.1 | tripartite tricarboxylate transporter substrate binding protein | - |
HRK07_RS11660 (HRK07_11585) | 2398400..2399158 | + | 759 | WP_010926609.1 | hypothetical protein | VF |
HRK07_RS11665 (HRK07_11590) | 2399348..2400085 | + | 738 | WP_010930483.1 | TerC family protein | - |
HRK07_RS11670 (HRK07_11595) | 2400184..2401134 | + | 951 | WP_005012808.1 | IS481 family transposase IS481v2 | Transposase |
HRK07_RS11675 (HRK07_11605) | 2401319..2402101 | + | 783 | WP_003816696.1 | ABC transporter ATP-binding protein | - |
HRK07_RS11680 (HRK07_11610) | 2402095..2402796 | + | 702 | WP_003810743.1 | hypothetical protein | VF |
HRK07_RS11685 (HRK07_11615) | 2403036..2403638 | + | 603 | WP_003810741.1 | TetR/AcrR family transcriptional regulator | - |
HRK07_RS11690 (HRK07_11620) | 2403614..2404528 | - | 915 | WP_010930484.1 | FAD-dependent oxidoreductase | - |
HRK07_RS11695 (HRK07_11625) | 2404965..2405915 | + | 951 | WP_005013747.1 | IS481 family transposase IS481 | Transposase |
HRK07_RS11700 (HRK07_11630) | 2405912..2407468 | - | 1557 | WP_014486074.1 | hypothetical protein | VF |
HRK07_RS11705 (HRK07_11635) | 2407461..2408234 | - | 774 | WP_010930486.1 | hypothetical protein | VF |
HRK07_RS11710 (HRK07_11640) | 2408293..2409243 | - | 951 | WP_077069076.1 | IS481 family transposase IS481 | Transposase |
HRK07_RS11715 (HRK07_11645) | 2409325..2410500 | - | 1176 | WP_023852812.1 | hypothetical protein | VF |
HRK07_RS11720 (HRK07_11650) | 2410514..2412571 | - | 2058 | WP_010930473.1 | hypothetical protein | VF |
HRK07_RS11725 (HRK07_11655) | 2412568..2413593 | - | 1026 | WP_010930472.1 | hypothetical protein | VF |
HRK07_RS11730 (HRK07_11660) | 2413605..2414894 | - | 1290 | WP_010930471.1 | hypothetical protein | VF |
HRK07_RS11735 (HRK07_11665) | 2414917..2416014 | - | 1098 | WP_010930470.1 | hypothetical protein | VF |
HRK07_RS11740 (HRK07_11670) | 2416011..2416901 | - | 891 | WP_003811224.1 | capsular polysaccharide biosynthesis protein | - |
HRK07_RS11745 (HRK07_11675) | 2416898..2418982 | - | 2085 | WP_010930469.1 | hypothetical protein | VF |
HRK07_RS11750 (HRK07_11680) | 2419014..2420183 | - | 1170 | WP_010930468.1 | capsule polysaccharide transporter | - |
HRK07_RS11755 (HRK07_11685) | 2420225..2420965 | - | 741 | WP_014486073.1 | hypothetical protein | VF |
HRK07_RS11760 (HRK07_11690) | 2420965..2421735 | - | 771 | WP_010930466.1 | hypothetical protein | VF |
HRK07_RS11765 (HRK07_11695) | 2422060..2422227 | + | 168 | WP_019247171.1 | hypothetical protein | - |
HRK07_RS11770 (HRK07_11700) | 2422495..2423376 | + | 882 | WP_023995078.1 | hypothetical protein | VF |
HRK07_RS11775 (HRK07_11705) | 2423403..2425487 | + | 2085 | WP_010930464.1 | hypothetical protein | - |
HRK07_RS11780 (HRK07_11710) | 2425625..2427610 | + | 1986 | WP_010930463.1 | hypothetical protein | VF |
HRK07_RS11785 (HRK07_11715) | 2427934..2428434 | - | 501 | WP_003811209.1 | hypothetical protein | VF |
HRK07_RS11790 (HRK07_11720) | 2428533..2430059 | - | 1527 | WP_010930461.1 | CoA-acylating methylmalonate-semialdehyde dehydrogenase | - |
HRK07_RS11795 (HRK07_11725) | 2430197..2431084 | + | 888 | WP_010930460.1 | hypothetical protein | VF |
HRK07_RS11800 (HRK07_11730) | 2431099..2432052 | - | 954 | WP_003811203.1 | hypothetical protein | VF |
HRK07_RS11805 (HRK07_11735) | 2432104..2434194 | - | 2091 | WP_033446218.1 | ATP-dependent DNA helicase RecG | - |
HRK07_RS11810 (HRK07_11740) | 2434210..2434596 | - | 387 | WP_010930458.1 | Rid family detoxifying hydrolase | - |
HRK07_RS11815 (HRK07_11745) | 2434773..2437126 | - | 2354 | Protein_2326 | hypothetical protein | VF |
HRK07_RS11820 (HRK07_11750) | 2437290..2438093 | - | 804 | WP_010930457.1 | 2,5-didehydrogluconate reductase DkgB | - |
HRK07_RS11825 (HRK07_11755) | 2438165..2439285 | - | 1121 | Protein_2328 | MFS transporter | - |
HRK07_RS11830 (HRK07_11760) | 2439387..2440289 | + | 903 | WP_010930456.1 | hypothetical protein | VF |
HRK07_RS11835 (HRK07_11765) | 2440354..2441130 | - | 777 | WP_003811187.1 | ferredoxin--NADP reductase | - |
HRK07_RS11840 (HRK07_11770) | 2441452..2442501 | + | 1050 | WP_010930455.1 | Fe(3+) ABC transporter substrate-binding protein | - |
HRK07_RS11845 (HRK07_11775) | 2442625..2444295 | + | 1671 | WP_010930454.1 | iron ABC transporter permease | - |
HRK07_RS11850 (HRK07_11780) | 2444300..2445094 | + | 795 | WP_019248220.1 | hypothetical protein | VF |
HRK07_RS11855 (HRK07_11785) | 2445193..2446143 | + | 951 | WP_005012067.1 | IS481 family transposase IS481v2 | Transposase |
HRK07_RS11860 (HRK07_11790) | 2446163..2447068 | - | 906 | WP_010930453.1 | pirin family protein | - |
HRK07_RS11865 (HRK07_11795) | 2447146..2447844 | - | 699 | WP_003811176.1 | pirin family protein | - |
HRK07_RS11870 (HRK07_11800) | 2448004..2448948 | + | 945 | WP_010930452.1 | hypothetical protein | VF |
HRK07_RS11875 (HRK07_11805) | 2448958..2450445 | - | 1488 | WP_010930451.1 | hypothetical protein | VF |
HRK07_RS11880 (HRK07_11810) | 2450445..2451512 | - | 1068 | WP_003811167.1 | nitrogen regulation protein NR(II) | - |
HRK07_RS11885 (HRK07_11815) | 2451576..2452988 | - | 1413 | WP_003811164.1 | type I glutamate--ammonia ligase | - |
HRK07_RS11890 (HRK07_11820) | 2453174..2454394 | - | 1221 | WP_010930450.1 | hypothetical protein | VF |
HRK07_RS11895 (HRK07_11825) | 2454416..2455366 | - | 951 | WP_005012808.1 | IS481 family transposase IS481v2 | Transposase |
HRK07_RS11900 (HRK07_11830) | 2455465..2456106 | - | 642 | WP_010930449.1 | hypothetical protein | VF |
HRK07_RS11905 (HRK07_11835) | 2456233..2458035 | + | 1803 | WP_010930448.1 | EAL domain-containing protein | - |
HRK07_RS11910 (HRK07_11840) | 2458174..2459604 | - | 1431 | Protein_2345 | hypothetical protein | VF |
HRK07_RS11915 (HRK07_11845) | 2459687..2460592 | - | 906 | WP_003811152.1 | LysR family transcriptional regulator | - |
HRK07_RS11920 (HRK07_11850) | 2460774..2462150 | + | 1377 | WP_010930446.1 | MmgE/PrpD family protein | - |
HRK07_RS11925 (HRK07_11855) | 2462317..2463057 | - | 741 | WP_003811149.1 | ribonuclease PH | - |
HRK07_RS11930 (HRK07_11860) | 2463194..2464120 | + | 927 | WP_003811148.1 | YicC/YloC family endoribonuclease | - |
HRK07_RS11935 (HRK07_11865) | 2464393..2464548 | + | 156 | WP_010930445.1 | hypothetical protein | - |
HRK07_RS19980 | 2464561..2464689 | + | 129 | WP_010928840.1 | hypothetical protein | - |
HRK07_RS11940 (HRK07_11870) | 2464686..2464970 | + | 285 | WP_010926696.1 | helix-turn-helix domain-containing protein | - |
HRK07_RS11945 (HRK07_11875) | 2465029..2466519 | - | 1491 | WP_003811138.1 | AMP nucleosidase | - |
HRK07_RS11950 (HRK07_11880) | 2466764..2467363 | + | 600 | WP_003811137.1 | hypothetical protein | VF |
HRK07_RS11955 (HRK07_11885) | 2467368..2468138 | - | 771 | WP_003811135.1 | hypothetical protein | VF |
HRK07_RS11960 (HRK07_11890) | 2468376..2469089 | + | 714 | WP_010930444.1 | hypothetical protein | VF |
HRK07_RS11965 (HRK07_11895) | 2469086..2470003 | + | 918 | WP_010930443.1 | c-type cytochrome | - |
HRK07_RS11970 (HRK07_11900) | 2470139..2470771 | + | 633 | WP_010930442.1 | guanylate kinase | - |
HRK07_RS11975 (HRK07_11905) | 2470813..2471016 | + | 204 | WP_010930441.1 | DNA-directed RNA polymerase subunit omega | - |
HRK07_RS11980 (HRK07_11910) | 2471041..2473320 | + | 2280 | WP_010930440.1 | hypothetical protein | VF |
HRK07_RS11985 (HRK07_11915) | 2473333..2474061 | - | 729 | WP_003811113.1 | hypothetical protein | VF |
HRK07_RS11990 (HRK07_11920) | 2474058..2474717 | - | 660 | WP_003811112.1 | glutamine ABC transporter permease GlnP | - |
HRK07_RS11995 (HRK07_11925) | 2474786..2475538 | - | 753 | WP_010930439.1 | glutamine ABC transporter substrate-binding protein GlnH | - |
HRK07_RS12000 (HRK07_11930) | 2475720..2476670 | - | 951 | WP_005012067.1 | IS481 family transposase IS481v2 | Transposase |
HRK07_RS12005 (HRK07_11935) | 2476829..2477477 | + | 649 | Protein_2365 | site-2 protease family protein | - |
HRK07_RS12010 (HRK07_11940) | 2477563..2478468 | + | 906 | WP_033446216.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
HRK07_RS12015 (HRK07_11945) | 2478480..2479607 | + | 1128 | WP_010930437.1 | outer membrane protein assembly factor BamC | - |
HRK07_RS12020 (HRK07_11950) | 2479696..2480310 | - | 615 | WP_010930436.1 | hypothetical protein | VF |
HRK07_RS12025 (HRK07_11955) | 2480337..2480690 | - | 354 | WP_240077191.1 | hypothetical protein | - |
HRK07_RS12030 (HRK07_11960) | 2480959..2482146 | - | 1188 | WP_010930435.1 | cupin domain-containing protein | - |
HRK07_RS12035 (HRK07_11965) | 2482143..2484740 | - | 2598 | WP_033446228.1 | DNA mismatch repair protein MutS | - |
HRK07_RS12040 (HRK07_11970) | 2484995..2485210 | + | 216 | WP_010930433.1 | dodecin family protein | - |
HRK07_RS12045 (HRK07_11975) | 2485666..2486220 | - | 555 | WP_010930432.1 | NAD(P)H-dependent oxidoreductase | - |
HRK07_RS12050 (HRK07_11980) | 2486488..2487048 | + | 561 | WP_010930431.1 | membrane protein | - |
HRK07_RS12055 (HRK07_11985) | 2487160..2488464 | + | 1305 | WP_023853587.1 | imelysin family protein | - |
HRK07_RS12060 (HRK07_11990) | 2488461..2489972 | + | 1512 | WP_019247498.1 | di-heme oxidoredictase family protein | - |
HRK07_RS12065 (HRK07_11995) | 2490024..2491079 | + | 1056 | WP_224019495.1 | imelysin family protein | - |
HRK07_RS12070 (HRK07_12000) | 2491069..2492181 | + | 1113 | WP_019249265.1 | DUF1513 domain-containing protein | - |
HRK07_RS12075 (HRK07_12005) | 2492280..2493230 | + | 951 | WP_005012067.1 | IS481 family transposase IS481v2 | Transposase |
HRK07_RS12080 (HRK07_12010) | 2493227..2493853 | - | 627 | WP_010928449.1 | L-threonylcarbamoyladenylate synthase | - |
HRK07_RS12085 (HRK07_12015) | 2493913..2494764 | + | 852 | WP_010930427.1 | neutral zinc metallopeptidase | - |
HRK07_RS12090 (HRK07_12020) | 2494868..2495467 | + | 600 | WP_010930426.1 | hypothetical protein | - |
HRK07_RS12095 (HRK07_12025) | 2495464..2496228 | + | 765 | WP_010930425.1 | hypothetical protein | - |
HRK07_RS12100 (HRK07_12030) | 2496298..2497248 | - | 951 | WP_005013747.1 | IS481 family transposase IS481 | Transposase |
HRK07_RS12105 (HRK07_12035) | 2497347..2497955 | - | 609 | WP_010930424.1 | recombination mediator RecR | - |
HRK07_RS12110 (HRK07_12040) | 2498006..2498332 | - | 327 | WP_010930423.1 | YbaB/EbfC family nucleoid-associated protein | - |
HRK07_RS12115 (HRK07_12045) | 2498379..2500469 | - | 2091 | WP_010930422.1 | DNA polymerase III subunit gamma/tau | - |
HRK07_RS12125 (HRK07_12055) | 2501262..2504666 | - | 3405 | WP_010930421.1 | UvrD-helicase domain-containing protein | - |
HRK07_RS12130 (HRK07_12060) | 2504679..2507339 | - | 2661 | WP_010930420.1 | PD-(D/E)XK nuclease family protein | - |
HRK07_RS12135 (HRK07_12065) | 2507361..2507507 | - | 147 | WP_004568212.1 | hypothetical protein | - |
HRK07_RS12140 (HRK07_12070) | 2507543..2508745 | - | 1203 | WP_010930419.1 | MFS transporter | - |
HRK07_RS12150 (HRK07_12080) | 2509432..2510544 | + | 1113 | WP_023994932.1 | D-alanyl-D-alanine endopeptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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