NZ_CP0540762342399..2503996

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 161598 bp
Accession: NZ_CP054076        Location: 2342399..2503996         Organism: Bordetella pertussis strain NZ55       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HRK10_RS11360 (HRK10_11290) 2337596..2339497 + 1902 WP_010930517.1 TRAP transporter large permease subunit -
HRK10_RS11365 (HRK10_11295) 2339546..2340340 + 795 WP_010930516.1 enoyl-CoA hydratase/isomerase family protein -
HRK10_RS11370 (HRK10_11300) 2340353..2341354 - 1002 WP_010930515.1 LD-carboxypeptidase -
HRK10_RS11375 (HRK10_11305) 2341351..2341857 - 507 WP_004568494.1 tRNA adenosine(34) deaminase TadA -
HRK10_RS11380 (HRK10_11310) 2341850..2342698 - 849 WP_010930513.1 HAD family hydrolase -
HRK10_RS11385 (HRK10_11315) 2342796..2343338 - 543 WP_019247780.1 hypothetical protein -
HRK10_RS11390 (HRK10_11320) 2343382..2344332 - 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRK10_RS11395 (HRK10_11325) 2344488..2344814 - 327 WP_010930511.1 monovalent cation/H(+) antiporter subunit G -
HRK10_RS11400 (HRK10_11330) 2344811..2345095 - 285 WP_003810975.1 K+/H+ antiporter subunit F -
HRK10_RS11405 (HRK10_11335) 2345092..2345571 - 480 WP_010930510.1 Na+/H+ antiporter subunit E -
HRK10_RS11410 (HRK10_11340) 2345568..2347196 - 1629 WP_004568496.1 monovalent cation/H+ antiporter subunit D -
HRK10_RS11415 (HRK10_11345) 2347193..2347537 - 345 WP_003810969.1 Na+/H+ antiporter subunit C -
HRK10_RS11420 (HRK10_11350) 2347537..2350470 - 2934 WP_010930509.1 monovalent cation/H+ antiporter subunit A -
HRK10_RS11425 (HRK10_11355) 2350892..2351629 + 738 Protein_2248 tripartite tricarboxylate transporter substrate-binding protein -
HRK10_RS11430 (HRK10_11360) 2351629..2352579 - 951 WP_010929588.1 IS481 family transposase IS481v1 Transposase
HRK10_RS11435 (HRK10_11365) 2352678..2352974 - 297 WP_003811452.1 hypothetical protein -
HRK10_RS11440 (HRK10_11370) 2353096..2353998 + 903 WP_023995058.1 HTH-type transcriptional regulator CynR VF
HRK10_RS11445 (HRK10_11375) 2354003..2354716 - 714 WP_010930507.1 Sulfoquinovose 1-dehydrogenase VF
HRK10_RS11450 (HRK10_11380) 2354730..2355701 - 972 WP_010930506.1 tripartite tricarboxylate transporter substrate binding protein -
HRK10_RS11455 (HRK10_11385) 2355826..2357154 - 1329 Protein_2254 amidohydrolase family protein -
HRK10_RS11460 (HRK10_11390) 2357421..2357801 + 381 WP_019249653.1 helix-turn-helix domain-containing protein -
HRK10_RS11465 (HRK10_11395) 2357805..2358992 + 1188 WP_010930504.1 MFS transporter -
HRK10_RS11470 (HRK10_11400) 2359016..2359438 + 423 Protein_2257 arsenate reductase (glutaredoxin) -
HRK10_RS11475 (HRK10_11405) 2359431..2360153 + 723 WP_010930503.1 arsenical resistance protein ArsH -
HRK10_RS11480 (HRK10_11410) 2360150..2360341 - 192 WP_023852764.1 hypothetical protein -
HRK10_RS11485 (HRK10_11415) 2360447..2361397 + 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRK10_RS11490 (HRK10_11420) 2361394..2361822 - 429 WP_019249376.1 hypothetical protein -
HRK10_RS11495 (HRK10_11425) 2361819..2363209 - 1391 Protein_2262 Arylsulfatase VF
HRK10_RS11500 (HRK10_11430) 2363224..2364186 - 963 WP_003811538.1 tripartite tricarboxylate transporter substrate binding protein -
HRK10_RS11505 (HRK10_11435) 2364302..2365255 + 954 WP_010930502.1 LysR family transcriptional regulator -
HRK10_RS11510 (HRK10_11440) 2365265..2366257 - 993 WP_010930501.1 tripartite tricarboxylate transporter substrate binding protein -
HRK10_RS11515 (HRK10_11445) 2366309..2367040 - 732 WP_230457143.1 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase VF
HRK10_RS11520 (HRK10_11450) 2367129..2367818 - 690 WP_010930499.1 SDR family oxidoreductase -
HRK10_RS11525 (HRK10_11455) 2367899..2368990 + 1092 WP_023997526.1 fumarylacetoacetate hydrolase family protein -
HRK10_RS11530 (HRK10_11460) 2369021..2370217 + 1197 WP_010930497.1 alpha-hydroxy acid oxidase -
HRK10_RS11535 (HRK10_11465) 2370214..2370987 + 774 WP_010930496.1 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase VF
HRK10_RS11540 (HRK10_11470) 2371004..2372026 + 1023 WP_023852774.1 tripartite tricarboxylate transporter substrate binding protein -
HRK10_RS11545 (HRK10_11475) 2372112..2373056 + 945 WP_010930494.1 LysR family transcriptional regulator -
HRK10_RS11550 (HRK10_11480) 2373034..2373903 - 870 WP_010930493.1 TauD/TfdA family dioxygenase -
HRK10_RS11555 (HRK10_11485) 2374147..2374770 + 624 WP_010930492.1 glutathione S-transferase N-terminal domain-containing protein -
HRK10_RS11560 (HRK10_11490) 2374903..2375082 + 180 WP_225975616.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
HRK10_RS11565 (HRK10_11495) 2375085..2375384 + 300 WP_019247905.1 NadS family protein Antitoxin Detail
HRK10_RS11570 (HRK10_11500) 2375398..2378472 - 3075 WP_023995112.1 autotransporter SphB2 -
HRK10_RS11575 (HRK10_11505) 2378602..2379276 + 675 WP_010930489.1 putative transcriptional regulatory protein NarL VF
HRK10_RS11580 (HRK10_11510) 2379269..2381083 + 1815 WP_019247865.1 7TM diverse intracellular signaling domain-containing protein -
HRK10_RS11585 (HRK10_11515) 2381137..2382084 - 948 WP_010930487.1 hypothetical protein -
HRK10_RS11590 (HRK10_11520) 2382189..2383139 + 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRK10_RS11595 (HRK10_11525) 2383155..2383613 - 459 Protein_2282 spermidine synthase -
HRK10_RS11600 (HRK10_11530) 2383692..2385317 - 1626 WP_023852967.1 Arylsulfatase VF
HRK10_RS11605 (HRK10_11535) 2385367..2386401 - 1035 WP_010930475.1 HAD family hydrolase -
HRK10_RS11610 (HRK10_11540) 2386404..2387750 - 1347 WP_010930476.1 BatD family protein -
HRK10_RS11615 (HRK10_11545) 2387747..2389261 - 1515 WP_010930477.1 VWA domain-containing protein -
HRK10_RS11620 (HRK10_11550) 2389252..2390262 - 1011 WP_010930478.1 VWA domain-containing protein -
HRK10_RS11625 (HRK10_11555) 2390249..2390739 - 491 Protein_2288 DUF4381 domain-containing protein -
HRK10_RS11630 (HRK10_11560) 2390736..2391677 - 942 WP_010930479.1 DUF58 domain-containing protein -
HRK10_RS11635 (HRK10_11565) 2391686..2392654 - 969 WP_010930480.1 AAA family ATPase -
HRK10_RS11640 (HRK10_11570) 2392710..2393850 - 1141 Protein_2291 formylglycine-generating enzyme family protein -
HRK10_RS11645 (HRK10_11575) 2394194..2395162 + 969 WP_010930481.1 transporter -
HRK10_RS11650 (HRK10_11580) 2395340..2396329 + 990 WP_010930482.1 tripartite tricarboxylate transporter substrate binding protein -
HRK10_RS11655 (HRK10_11585) 2396376..2397134 + 759 WP_010926609.1 Dihydroanticapsin 7-dehydrogenase VF
HRK10_RS11660 (HRK10_11590) 2397324..2398061 + 738 WP_010930483.1 TerC family protein -
HRK10_RS11665 (HRK10_11595) 2398160..2399110 + 951 WP_005012808.1 IS481 family transposase IS481v2 Transposase
HRK10_RS11670 (HRK10_11605) 2399295..2400077 + 783 WP_003816696.1 ABC transporter ATP-binding protein -
HRK10_RS11675 (HRK10_11610) 2400071..2400772 + 702 WP_003810743.1 High-affinity branched-chain amino acid transport ATP-binding protein LivF VF
HRK10_RS11680 (HRK10_11615) 2401012..2401614 + 603 WP_003810741.1 TetR/AcrR family transcriptional regulator -
HRK10_RS11685 (HRK10_11620) 2401590..2402504 - 915 WP_010930484.1 FAD-dependent oxidoreductase -
HRK10_RS11690 (HRK10_11625) 2402941..2403891 + 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRK10_RS11695 (HRK10_11630) 2403888..2405444 - 1557 WP_014486074.1 hypothetical protein VF
HRK10_RS11700 (HRK10_11635) 2405437..2406210 - 774 WP_010930486.1 hypothetical protein VF
HRK10_RS11705 (HRK10_11640) 2406269..2407219 - 951 WP_135283049.1 IS481 family transposase IS481v1 Transposase
HRK10_RS11710 (HRK10_11645) 2407301..2408476 - 1176 WP_023852812.1 hypothetical protein VF
HRK10_RS11715 (HRK10_11650) 2408490..2410547 - 2058 WP_010930473.1 hypothetical protein VF
HRK10_RS11720 (HRK10_11655) 2410544..2411569 - 1026 WP_010930472.1 GDP-mannose 4,6-dehydratase VF
HRK10_RS11725 (HRK10_11660) 2411581..2412870 - 1290 WP_010930471.1 UDP-N-acetyl-D-mannosamine dehydrogenase VF
HRK10_RS11730 (HRK10_11665) 2412893..2413990 - 1098 WP_010930470.1 hypothetical protein VF
HRK10_RS11735 (HRK10_11670) 2413987..2414877 - 891 WP_003811224.1 capsular polysaccharide biosynthesis protein -
HRK10_RS11740 (HRK10_11675) 2414874..2416958 - 2085 WP_010930469.1 D-inositol-3-phosphate glycosyltransferase VF
HRK10_RS11745 (HRK10_11680) 2416990..2418159 - 1170 WP_010930468.1 capsule polysaccharide transporter -
HRK10_RS11750 (HRK10_11685) 2418201..2418941 - 741 WP_014486073.1 Vitamin B12 import ATP-binding protein BtuD VF
HRK10_RS11755 (HRK10_11690) 2418941..2419711 - 771 WP_010930466.1 hypothetical protein VF
HRK10_RS11760 (HRK10_11695) 2420036..2420203 + 168 WP_019247171.1 hypothetical protein -
HRK10_RS11765 (HRK10_11700) 2420471..2421352 + 882 WP_023995078.1 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase VF
HRK10_RS11770 (HRK10_11705) 2421379..2423463 + 2085 WP_010930464.1 hypothetical protein -
HRK10_RS11775 (HRK10_11710) 2423601..2425586 + 1986 WP_010930463.1 hypothetical protein VF
HRK10_RS11780 (HRK10_11715) 2425910..2426410 - 501 WP_003811209.1 DNA protection during starvation protein VF
HRK10_RS11785 (HRK10_11720) 2426509..2428035 - 1527 WP_010930461.1 CoA-acylating methylmalonate-semialdehyde dehydrogenase -
HRK10_RS11790 (HRK10_11725) 2428173..2429060 + 888 WP_010930460.1 HTH-type transcriptional regulator ArgP VF
HRK10_RS11795 (HRK10_11730) 2429075..2430028 - 954 WP_003811203.1 HTH-type transcriptional regulator HdfR VF
HRK10_RS11800 (HRK10_11735) 2430080..2432170 - 2091 WP_033446218.1 ATP-dependent DNA helicase RecG -
HRK10_RS11805 (HRK10_11740) 2432186..2432572 - 387 WP_010930458.1 Rid family detoxifying hydrolase -
HRK10_RS11810 (HRK10_11745) 2432749..2435102 - 2354 Protein_2325 Pertactin autotransporter VF
HRK10_RS11815 (HRK10_11750) 2435266..2436069 - 804 WP_010930457.1 2,5-didehydrogluconate reductase DkgB -
HRK10_RS11820 (HRK10_11755) 2436141..2437261 - 1121 Protein_2327 MFS transporter -
HRK10_RS11825 (HRK10_11760) 2437363..2438265 + 903 WP_010930456.1 HTH-type transcriptional regulator DmlR VF
HRK10_RS11830 (HRK10_11765) 2438330..2439106 - 777 WP_003811187.1 ferredoxin--NADP reductase -
HRK10_RS11835 (HRK10_11770) 2439428..2440477 + 1050 WP_010930455.1 Fe(3+) ABC transporter substrate-binding protein -
HRK10_RS11840 (HRK10_11775) 2440601..2442271 + 1671 WP_010930454.1 iron ABC transporter permease -
HRK10_RS11845 (HRK10_11780) 2442276..2443070 + 795 WP_019248220.1 Sulfate/thiosulfate import ATP-binding protein CysA VF
HRK10_RS11850 (HRK10_11785) 2443169..2444119 + 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRK10_RS11855 (HRK10_11790) 2444139..2445044 - 906 WP_010930453.1 pirin family protein -
HRK10_RS11860 (HRK10_11795) 2445122..2445820 - 699 WP_003811176.1 pirin family protein -
HRK10_RS11865 (HRK10_11800) 2445980..2446924 + 945 WP_010930452.1 HTH-type transcriptional regulator YhaJ VF
HRK10_RS11870 (HRK10_11805) 2446934..2448421 - 1488 WP_010930451.1 DNA-binding transcriptional regulator NtrC VF
HRK10_RS11875 (HRK10_11810) 2448421..2449488 - 1068 WP_003811167.1 nitrogen regulation protein NR(II) -
HRK10_RS11880 (HRK10_11815) 2449552..2450964 - 1413 WP_003811164.1 type I glutamate--ammonia ligase -
HRK10_RS11885 (HRK10_11820) 2451150..2452370 - 1221 WP_010930450.1 Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR VF
HRK10_RS11890 (HRK10_11825) 2452392..2453342 - 951 WP_005012808.1 IS481 family transposase IS481v2 Transposase
HRK10_RS11895 (HRK10_11830) 2453441..2454082 - 642 WP_010930449.1 dITP/XTP pyrophosphatase VF
HRK10_RS11900 (HRK10_11835) 2454209..2456011 + 1803 WP_010930448.1 EAL domain-containing protein -
HRK10_RS11905 (HRK10_11840) 2456150..2457580 - 1431 Protein_2344 Methyl-accepting chemotaxis protein I VF
HRK10_RS11910 (HRK10_11845) 2457663..2458568 - 906 WP_003811152.1 LysR family transcriptional regulator -
HRK10_RS11915 (HRK10_11850) 2458750..2460126 + 1377 WP_010930446.1 MmgE/PrpD family protein -
HRK10_RS11920 (HRK10_11855) 2460293..2461033 - 741 WP_003811149.1 ribonuclease PH -
HRK10_RS11925 (HRK10_11860) 2461170..2462096 + 927 WP_003811148.1 YicC/YloC family endoribonuclease -
HRK10_RS11930 (HRK10_11865) 2462369..2462524 + 156 WP_010930445.1 hypothetical protein -
HRK10_RS19960 2462537..2462665 + 129 WP_010928840.1 hypothetical protein -
HRK10_RS11935 (HRK10_11870) 2462662..2462946 + 285 WP_010926696.1 helix-turn-helix domain-containing protein -
HRK10_RS11940 (HRK10_11875) 2463005..2464495 - 1491 WP_003811138.1 AMP nucleosidase -
HRK10_RS11945 (HRK10_11880) 2464740..2465339 + 600 WP_003811137.1 Murein DD-endopeptidase MepH VF
HRK10_RS11950 (HRK10_11885) 2465344..2466114 - 771 WP_003811135.1 3-beta-hydroxycholanate 3-dehydrogenase (NADP(+)) VF
HRK10_RS11955 (HRK10_11890) 2466352..2467065 + 714 WP_010930444.1 Cytochrome c4 VF
HRK10_RS11960 (HRK10_11895) 2467062..2467979 + 918 WP_010930443.1 c-type cytochrome -
HRK10_RS11965 (HRK10_11900) 2468115..2468747 + 633 WP_010930442.1 guanylate kinase -
HRK10_RS11970 (HRK10_11905) 2468789..2468992 + 204 WP_010930441.1 DNA-directed RNA polymerase subunit omega -
HRK10_RS11975 (HRK10_11910) 2469017..2471296 + 2280 WP_010930440.1 Bifunctional (p)ppGpp synthase/hydrolase SpoT VF
HRK10_RS11980 (HRK10_11915) 2471309..2472037 - 729 WP_003811113.1 Glutamine transport ATP-binding protein GlnQ VF
HRK10_RS11985 (HRK10_11920) 2472034..2472693 - 660 WP_003811112.1 glutamine ABC transporter permease GlnP -
HRK10_RS11990 (HRK10_11925) 2472762..2473514 - 753 WP_010930439.1 glutamine ABC transporter substrate-binding protein GlnH -
HRK10_RS11995 (HRK10_11930) 2473696..2474646 - 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRK10_RS12000 (HRK10_11935) 2474805..2475453 + 649 Protein_2364 site-2 protease family protein -
HRK10_RS12005 (HRK10_11940) 2475539..2476444 + 906 WP_033446216.1 4-hydroxy-tetrahydrodipicolinate synthase -
HRK10_RS12010 (HRK10_11945) 2476456..2477583 + 1128 WP_010930437.1 outer membrane protein assembly factor BamC -
HRK10_RS12015 (HRK10_11950) 2477672..2478286 - 615 WP_010930436.1 Major fimbrial subunit SMF-1 VF
HRK10_RS12020 (HRK10_11955) 2478333..2478668 - 336 WP_240076245.1 hypothetical protein -
HRK10_RS12025 (HRK10_11960) 2478937..2480124 - 1188 WP_010930435.1 cupin domain-containing protein -
HRK10_RS12030 (HRK10_11965) 2480121..2482718 - 2598 WP_033446228.1 DNA mismatch repair protein MutS -
HRK10_RS12035 (HRK10_11970) 2482973..2483188 + 216 WP_010930433.1 dodecin family protein -
HRK10_RS12040 (HRK10_11975) 2483644..2484198 - 555 WP_010930432.1 NAD(P)H-dependent oxidoreductase -
HRK10_RS12045 (HRK10_11980) 2484466..2485026 + 561 WP_010930431.1 membrane protein -
HRK10_RS12050 (HRK10_11985) 2485138..2486442 + 1305 WP_023853587.1 imelysin family protein -
HRK10_RS12055 (HRK10_11990) 2486439..2487950 + 1512 WP_019247498.1 di-heme oxidoredictase family protein -
HRK10_RS12060 (HRK10_11995) 2488002..2489057 + 1056 WP_224019495.1 imelysin family protein -
HRK10_RS12065 (HRK10_12000) 2489047..2490159 + 1113 WP_019249265.1 DUF1513 domain-containing protein -
HRK10_RS12070 (HRK10_12005) 2490258..2491208 + 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRK10_RS12075 (HRK10_12010) 2491205..2491831 - 627 WP_010928449.1 L-threonylcarbamoyladenylate synthase -
HRK10_RS12080 (HRK10_12015) 2491891..2492742 + 852 WP_010930427.1 neutral zinc metallopeptidase -
HRK10_RS12085 (HRK10_12020) 2492846..2493445 + 600 WP_010930426.1 hypothetical protein -
HRK10_RS12090 (HRK10_12025) 2493442..2494206 + 765 WP_010930425.1 hypothetical protein -
HRK10_RS12095 (HRK10_12030) 2494276..2495226 - 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRK10_RS12100 (HRK10_12035) 2495325..2495933 - 609 WP_010930424.1 recombination mediator RecR -
HRK10_RS12105 (HRK10_12040) 2495984..2496310 - 327 WP_010930423.1 YbaB/EbfC family nucleoid-associated protein -
HRK10_RS12110 (HRK10_12045) 2496357..2498447 - 2091 WP_010930422.1 DNA polymerase III subunit gamma/tau -
HRK10_RS12120 (HRK10_12055) 2499250..2502654 - 3405 WP_010930421.1 UvrD-helicase domain-containing protein -
HRK10_RS12125 (HRK10_12060) 2502667..2505327 - 2661 WP_010930420.1 PD-(D/E)XK nuclease family protein -
HRK10_RS12130 (HRK10_12065) 2505349..2505495 - 147 WP_004568212.1 hypothetical protein -
HRK10_RS12135 (HRK10_12070) 2505531..2506733 - 1203 WP_010930419.1 MFS transporter -
HRK10_RS12145 (HRK10_12080) 2507420..2508532 + 1113 WP_023994932.1 D-alanyl-D-alanine endopeptidase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance