MGE detailed information
MGE type: Prophage MGE length: 66679 bp
Accession: NZ_CP054058 Location: 946621..1013299 Organism: Scandinavium goeteborgense strain CCUG 66741 Replicon: chromosome
Accession: NZ_CP054058 Location: 946621..1013299 Organism: Scandinavium goeteborgense strain CCUG 66741 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A8O29_RS05295 () | 942898..943893 | - | 996 | WP_125352037.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| A8O29_RS05300 () | 943957..945039 | - | 1083 | WP_125352036.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| A8O29_RS05305 () | 945032..946234 | - | 1203 | WP_125352035.1 | glycine betaine/L-proline ABC transporter ATP-binding protein ProV | - |
| A8O29_RS05310 () | 946621..947583 | - | 963 | WP_125352034.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| A8O29_RS05315 () | 947594..949738 | - | 2145 | WP_125352033.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| A8O29_RS05320 () | 949711..950121 | - | 411 | WP_125352032.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| A8O29_RS05325 () | 950118..950363 | - | 246 | WP_110511352.1 | glutaredoxin-like protein NrdH | - |
| A8O29_RS05330 () | 950545..950976 | - | 432 | WP_125352031.1 | carboxymuconolactone decarboxylase family protein | - |
| A8O29_RS05335 () | 951062..952414 | + | 1353 | WP_174081226.1 | PLP-dependent aminotransferase family protein | - |
| A8O29_RS05340 () | 952479..952805 | - | 327 | WP_125352030.1 | DUF883 domain-containing protein | - |
| A8O29_RS05345 () | 952966..953310 | + | 345 | WP_125352029.1 | DUF2002 family protein | - |
| A8O29_RS05350 () | 953478..953915 | - | 438 | WP_110511348.1 | L-alanine exporter AlaE | - |
| A8O29_RS05355 () | 954413..954814 | + | 402 | WP_125352028.1 | DNA-binding protein StpA | - |
| A8O29_RS05360 () | 954879..955058 | - | 180 | WP_125352027.1 | hypothetical protein | - |
| A8O29_RS05365 () | 955221..955379 | + | 159 | WP_095283011.1 | YqaE/Pmp3 family membrane protein | - |
| A8O29_RS05370 () | 955488..956096 | - | 609 | WP_174081227.1 | short chain dehydrogenase | - |
| A8O29_RS05375 () | 956196..957095 | + | 900 | WP_174081228.1 | HTH-type transcriptional regulator ArgP | VF |
| A8O29_RS05380 () | 957134..957406 | - | 273 | WP_133461136.1 | N-acetyltransferase | - |
| A8O29_RS05385 () | 957406..957651 | - | 246 | WP_159465085.1 | (4Fe-4S)-binding protein | - |
| A8O29_RS05390 () | 957749..958615 | - | 867 | WP_159465084.1 | hypothetical protein | - |
| A8O29_RS05395 () | 959336..960274 | + | 939 | WP_110511339.1 | transcriptional regulator TdcA | - |
| A8O29_RS05400 () | 960359..961348 | + | 990 | WP_174081229.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| A8O29_RS05405 () | 961372..962703 | + | 1332 | WP_174081230.1 | threonine/serine transporter TdcC | - |
| A8O29_RS05410 () | 962724..963935 | + | 1212 | WP_174081231.1 | propionate kinase | - |
| A8O29_RS05415 () | 963967..966261 | + | 2295 | WP_174081232.1 | formate C-acetyltransferase | - |
| A8O29_RS05420 () | 966468..966953 | + | 486 | WP_110511334.1 | cold shock domain-containing protein | - |
| A8O29_RS05425 () | 967018..967512 | - | 495 | WP_125355232.1 | L,D-transpeptidase family protein | - |
| A8O29_RS05430 () | 967826..968161 | + | 336 | WP_174081233.1 | DUF1294 domain-containing protein | - |
| A8O29_RS05435 () | 968387..968890 | - | 504 | WP_174081234.1 | YbjP/YqhG family protein | - |
| A8O29_RS05440 () | 969030..969278 | - | 249 | WP_125356017.1 | hypothetical protein | - |
| A8O29_RS05445 () | 969649..969963 | - | 315 | WP_125355961.1 | helix-turn-helix domain-containing protein | - |
| A8O29_RS05450 () | 970047..970103 | - | 57 | Protein_915 | ash family protein | - |
| A8O29_RS05455 () | 971013..971828 | + | 816 | WP_174081235.1 | hypothetical protein | - |
| A8O29_RS05460 () | 971818..972201 | + | 384 | WP_125356032.1 | hypothetical protein | - |
| A8O29_RS05465 () | 972222..973388 | - | 1167 | WP_174081236.1 | Phosphoribosylamine--glycine ligase ; Integrase | Integrase |
| A8O29_RS05470 () | 973595..974164 | - | 570 | WP_125356014.1 | 3'-5' exoribonuclease | - |
| A8O29_RS05475 () | 974167..974340 | - | 174 | WP_174081237.1 | hypothetical protein | - |
| A8O29_RS05480 () | 974584..975126 | - | 543 | WP_125356028.1 | HD family hydrolase | - |
| A8O29_RS05485 () | 975908..976534 | - | 627 | WP_174081238.1 | LexA family transcriptional regulator | - |
| A8O29_RS05490 () | 976636..976833 | + | 198 | WP_174081239.1 | cell division protein | - |
| A8O29_RS05495 () | 976874..977431 | + | 558 | WP_174081423.1 | DNA-binding protein | - |
| A8O29_RS05500 () | 977606..977797 | + | 192 | WP_125355967.1 | DUF4222 domain-containing protein | - |
| A8O29_RS05505 () | 977794..978678 | + | 885 | WP_174081240.1 | conserved phage C-terminal domain-containing protein | - |
| A8O29_RS05510 () | 978675..978932 | + | 258 | WP_174081241.1 | hypothetical protein | - |
| A8O29_RS05515 () | 979006..979689 | + | 684 | WP_174081242.1 | DNA-binding protein | - |
| A8O29_RS05520 () | 979686..980717 | + | 1032 | WP_174081243.1 | DUF968 domain-containing protein | - |
| A8O29_RS05525 () | 980734..981084 | + | 351 | WP_174081244.1 | antitermination protein | - |
| A8O29_RS05530 () | 981516..982400 | - | 885 | WP_174081245.1 | hypothetical protein | - |
| A8O29_RS05535 () | 982681..982875 | + | 195 | WP_174081246.1 | TrmB family transcriptional regulator | - |
| A8O29_RS05540 () | 983023..984075 | + | 1053 | WP_125351760.1 | site-specific DNA-methyltransferase | - |
| A8O29_RS05545 () | 984218..985081 | + | 864 | WP_125351759.1 | cell envelope biogenesis protein OmpA | - |
| A8O29_RS05550 () | 985274..986116 | + | 843 | WP_125351758.1 | cell envelope biogenesis protein OmpA | - |
| A8O29_RS05555 () | 986210..986428 | + | 219 | WP_125351757.1 | hypothetical protein | - |
| A8O29_RS05560 () | 986689..986826 | - | 138 | WP_168713813.1 | hypothetical protein | - |
| A8O29_RS05565 () | 986931..987344 | - | 414 | WP_125351756.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| A8O29_RS05570 () | 987403..987585 | - | 183 | WP_125351755.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| A8O29_RS05575 () | 987691..989157 | + | 1467 | WP_174081247.1 | glycosyltransferase family 2 protein | - |
| A8O29_RS05580 () | 989364..989888 | + | 525 | WP_125351753.1 | KilA-N domain-containing protein | - |
| A8O29_RS05585 () | 989889..990488 | + | 600 | WP_174081248.1 | hypothetical protein | - |
| A8O29_RS05590 () | 990664..991158 | + | 495 | WP_125351751.1 | DUF1441 family protein | - |
| A8O29_RS05595 () | 991158..993263 | + | 2106 | WP_174081249.1 | phage terminase large subunit family protein | - |
| A8O29_RS05600 () | 993265..993483 | + | 219 | WP_174081250.1 | hypothetical protein | - |
| A8O29_RS05605 () | 993483..995015 | + | 1533 | WP_174081251.1 | phage portal protein | - |
| A8O29_RS05610 () | 995008..997011 | + | 2004 | WP_174081424.1 | L-arabonate dehydratase | VF |
| A8O29_RS05615 () | 997076..997405 | + | 330 | WP_174081252.1 | DUF2190 family protein | - |
| A8O29_RS05620 () | 997405..997761 | + | 357 | WP_125351746.1 | hypothetical protein | - |
| A8O29_RS05625 () | 997758..998396 | + | 639 | WP_174081253.1 | hypothetical protein | - |
| A8O29_RS05630 () | 998393..998959 | + | 567 | WP_174081254.1 | hypothetical protein | - |
| A8O29_RS05635 () | 998959..999465 | + | 507 | WP_125351743.1 | phage major tail tube protein | - |
| A8O29_RS05640 () | 999462..1000079 | + | 618 | WP_174081255.1 | phage tail protein | - |
| A8O29_RS05645 () | 1000072..1000686 | + | 615 | WP_174081256.1 | phage baseplate assembly protein V | - |
| A8O29_RS05650 () | 1000711..1001046 | + | 336 | WP_174081257.1 | GPW/gp25 family protein | - |
| A8O29_RS05655 () | 1001109..1001969 | + | 861 | WP_174081425.1 | baseplate J/gp47 family protein | - |
| A8O29_RS05660 () | 1001944..1002483 | + | 540 | WP_174081258.1 | phage tail protein I | - |
| A8O29_RS05665 () | 1002476..1003951 | + | 1476 | WP_174081259.1 | phage tail protein | - |
| A8O29_RS05670 () | 1003980..1004384 | + | 405 | WP_125355902.1 | tail fiber assembly protein | - |
| A8O29_RS05675 () | 1004398..1005234 | + | 837 | WP_125355893.1 | peptidoglycan-binding protein | - |
| A8O29_RS05680 () | 1005231..1005401 | + | 171 | WP_168713908.1 | hypothetical protein | - |
| A8O29_RS05685 () | 1005398..1005571 | + | 174 | WP_168713909.1 | hypothetical protein | - |
| A8O29_RS05690 () | 1005628..1007121 | + | 1494 | WP_125355894.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| A8O29_RS05695 () | 1007134..1007643 | + | 510 | WP_125355896.1 | phage major tail tube protein | - |
| A8O29_RS05700 () | 1007838..1008275 | - | 438 | WP_125355898.1 | hypothetical protein | - |
| A8O29_RS05705 () | 1008526..1008813 | + | 288 | WP_125355900.1 | phage tail assembly protein | - |
| A8O29_RS05710 () | 1008929..1010587 | + | 1659 | WP_174081260.1 | hypothetical protein | - |
| A8O29_RS05715 () | 1010598..1010804 | + | 207 | WP_174081261.1 | tail protein X | - |
| A8O29_RS05720 () | 1010808..1011851 | + | 1044 | WP_174081262.1 | late control protein | - |
| A8O29_RS05725 () | 1012082..1012942 | + | 861 | WP_174081263.1 | hypothetical protein | - |
| A8O29_RS05735 () | 1013901..1015064 | - | 1164 | WP_133461249.1 | HlyD family type I secretion periplasmic adaptor subunit | - |
| A8O29_RS05740 () | 1015072..1017264 | - | 2193 | WP_174081264.1 | type I secretion system permease/ATPase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|