MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 142760 bp
Accession: NZ_CP054057 Location: 1..142760 Organism: Scandinavium goeteborgense strain CCUG 66741 Replicon: plasmid pSg66741_1
Accession: NZ_CP054057 Location: 1..142760 Organism: Scandinavium goeteborgense strain CCUG 66741 Replicon: plasmid pSg66741_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A8O29_RS00005 () | 1..1038 | + | 1038 | WP_125354881.1 | RepB family plasmid replication initiator protein | - |
| A8O29_RS00010 () | 1189..1472 | + | 284 | Protein_1 | IS3 family transposase ISYen3 | Transposase |
| A8O29_RS00015 () | 1705..2870 | + | 1166 | WP_125355789.1 | IS3 family transposase ISKpn37 | Transposase |
| A8O29_RS00020 () | 2889..3733 | + | 845 | Protein_3 | IS3 family transposase IS1400 | Transposase |
| A8O29_RS00025 () | 3829..5193 | - | 1365 | Protein_4 | IS3 family transposase ISEcB1 | Transposase |
| A8O29_RS00030 () | 5260..5649 | + | 390 | WP_168713910.1 | IS66 family transposase ISCfr14 | Transposase |
| A8O29_RS00035 () | 5646..5993 | + | 348 | WP_052908738.1 | IS66 family transposase ISEc8 | Transposase |
| A8O29_RS00040 () | 6043..7578 | + | 1536 | WP_174081175.1 | IS66 family transposase ISCfr14 | Transposase |
| A8O29_RS00045 () | 7949..8575 | - | 627 | WP_168713897.1 | helix-turn-helix domain-containing protein | - |
| A8O29_RS00050 () | 9110..9508 | + | 399 | WP_168713896.1 | Pentapeptide repeat protein MfpA | VF |
| A8O29_RS00055 () | 9882..11043 | + | 1162 | Protein_10 | IS3 family transposase ISEc17 | Transposase |
| A8O29_RS00060 () | 11097..12178 | + | 1082 | Protein_11 | IS3 family transposase | - |
| A8O29_RS00065 () | 12208..12411 | - | 204 | Protein_12 | IS3 family transposase IS911 | Transposase |
| A8O29_RS00075 () | 13994..14554 | + | 561 | WP_125355463.1 | Fimbria A protein | VF |
| A8O29_RS00080 () | 14623..15147 | + | 525 | WP_125355461.1 | PAP fimbrial minor pilin protein | VF |
| A8O29_RS00085 () | 15179..17767 | + | 2589 | WP_125355459.1 | Outer membrane usher protein PapC | VF |
| A8O29_RS00090 () | 17850..18584 | + | 735 | WP_125355457.1 | putative fimbrial chaperone YfcS | VF |
| A8O29_RS00095 () | 18640..19230 | + | 591 | WP_125355455.1 | type 1 fimbrial protein | - |
| A8O29_RS00100 () | 19239..19739 | + | 501 | WP_125355453.1 | hypothetical protein | - |
| A8O29_RS00105 () | 19755..20255 | + | 501 | WP_125355451.1 | putative fimbrial-like protein YfcQ | VF |
| A8O29_RS00110 () | 20268..20831 | + | 564 | WP_125355449.1 | Major MR/P fimbria protein | VF |
| A8O29_RS00115 () | 20879..21652 | + | 774 | WP_125355447.1 | hypothetical protein | - |
| A8O29_RS00120 () | 21816..21923 | + | 108 | WP_168713895.1 | hypothetical protein | - |
| A8O29_RS00125 () | 22138..23895 | + | 1758 | WP_174081177.1 | O-antigen ligase family protein | - |
| A8O29_RS00130 () | 23920..24255 | + | 336 | WP_168713898.1 | hypothetical protein | - |
| A8O29_RS00135 () | 24249..25019 | + | 771 | WP_125355441.1 | glycosyltransferase family 2 protein | - |
| A8O29_RS00140 () | 25016..26725 | + | 1710 | WP_148098784.1 | hypothetical protein | - |
| A8O29_RS00145 () | 26729..27211 | + | 483 | WP_125355437.1 | hypothetical protein | - |
| A8O29_RS00150 () | 27208..28221 | + | 1014 | WP_125355435.1 | hypothetical protein | - |
| A8O29_RS00155 () | 28233..29048 | + | 816 | WP_125355433.1 | ABC transporter permease | - |
| A8O29_RS00160 () | 29045..29758 | + | 714 | WP_125355431.1 | Teichoic acids export ATP-binding protein TagH | VF |
| A8O29_RS00165 () | 29787..30428 | + | 642 | WP_125355429.1 | hypothetical protein | - |
| A8O29_RS00170 () | 30421..31056 | + | 636 | WP_125355428.1 | HAD family phosphatase | - |
| A8O29_RS00175 () | 31053..31478 | + | 426 | WP_125355426.1 | hypothetical protein | - |
| A8O29_RS00180 () | 32200..32820 | + | 621 | WP_125355424.1 | helix-turn-helix domain-containing protein | - |
| A8O29_RS00185 () | 33193..33645 | - | 453 | Protein_36 | IS630 family transposase ISEc33 | Transposase |
| A8O29_RS00190 () | 33629..33814 | - | 186 | Protein_37 | transposase | - |
| A8O29_RS00195 () | 33886..35051 | + | 1166 | WP_125355789.1 | IS3 family transposase ISKpn37 | Transposase |
| A8O29_RS00200 () | 35056..35532 | + | 477 | WP_174081179.1 | Multifunctional conjugation protein TraI | Relaxase |
| A8O29_RS00205 () | 35569..36366 | + | 798 | WP_168713904.1 | hypothetical protein | Relaxase |
| A8O29_RS00210 () | 36394..37170 | + | 777 | WP_125355838.1 | DsbA family protein | - |
| A8O29_RS00215 () | 37543..39081 | - | 1539 | WP_125355836.1 | IS66 family transposase ISEc22 | Transposase |
| A8O29_RS00220 () | 39130..39477 | - | 348 | WP_042922210.1 | IS66 family transposase ISEc8 | Transposase |
| A8O29_RS00225 () | 39474..39866 | - | 393 | WP_125355834.1 | IS66 family transposase ISKpn24 | Transposase |
| A8O29_RS00230 () | 40086..40497 | + | 412 | Protein_45 | IS66 family transposase ISSgsp1 | Transposase |
| A8O29_RS00235 () | 40628..41407 | - | 780 | WP_125355832.1 | Sua5/YciO/YrdC/YwlC family protein | - |
| A8O29_RS00240 () | 41626..42441 | - | 816 | WP_125355844.1 | ABC transporter permease | - |
| A8O29_RS00245 () | 42455..43285 | - | 831 | WP_125355831.1 | Bicarbonate transport ATP-binding protein CmpD | VF |
| A8O29_RS00250 () | 43272..44297 | - | 1026 | WP_125355829.1 | ABC transporter substrate-binding protein | - |
| A8O29_RS00255 () | 44503..45054 | - | 552 | WP_125355827.1 | chorismate mutase | - |
| A8O29_RS00260 () | 45602..45895 | + | 294 | WP_125355842.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| A8O29_RS00265 () | 45945..46685 | + | 741 | Protein_52 | IS66 family transposase ISCfr14 | Transposase |
| A8O29_RS00275 () | 47878..49119 | + | 1242 | WP_174081181.1 | hypothetical protein | - |
| A8O29_RS00280 () | 49759..50373 | + | 615 | WP_125353758.1 | hypothetical protein | - |
| A8O29_RS00285 () | 50697..51182 | - | 486 | WP_125353746.1 | hypothetical protein | - |
| A8O29_RS00290 () | 51510..52121 | - | 612 | WP_125353747.1 | DUF2913 family protein | - |
| A8O29_RS00295 () | 52764..53261 | + | 498 | WP_125353748.1 | hypothetical protein | VF |
| A8O29_RS00300 () | 53299..54849 | + | 1551 | WP_125353749.1 | hypothetical protein | VF |
| A8O29_RS00305 () | 54868..56205 | + | 1338 | WP_125353750.1 | hypothetical protein | VF |
| A8O29_RS00310 () | 56202..56855 | + | 654 | WP_125353751.1 | hypothetical protein | VF |
| A8O29_RS00315 () | 56859..58586 | + | 1728 | WP_174081183.1 | Outer membrane porin F | VF |
| A8O29_RS00320 () | 58590..59081 | + | 492 | WP_125353752.1 | type VI secretion system effector Hcp | - |
| A8O29_RS00325 () | 59264..61909 | + | 2646 | WP_125353753.1 | Protein ClpV1 | VF |
| A8O29_RS00330 () | 61924..62493 | + | 570 | WP_125353754.1 | type IV secretion protein Rhs | - |
| A8O29_RS00335 () | 62607..62954 | + | 348 | WP_125353760.1 | hypothetical protein | - |
| A8O29_RS00340 () | 62972..63181 | + | 210 | WP_125353755.1 | hypothetical protein | - |
| A8O29_RS00345 () | 63259..65895 | + | 2637 | WP_125353756.1 | Actin cross-linking toxin VgrG1 | VF |
| A8O29_RS00350 () | 65888..66427 | + | 540 | WP_125353757.1 | hypothetical protein | - |
| A8O29_RS00355 () | 66436..68340 | + | 1905 | WP_174081185.1 | LysM peptidoglycan-binding domain-containing protein | - |
| A8O29_RS00360 () | 68337..68921 | + | 585 | WP_125355925.1 | hypothetical protein | - |
| A8O29_RS00365 () | 68967..69233 | + | 267 | WP_125355927.1 | hypothetical protein | VF |
| A8O29_RS00370 () | 69237..70397 | + | 1161 | WP_125355929.1 | hypothetical protein | - |
| A8O29_RS00375 () | 70384..73797 | + | 3414 | WP_174081187.1 | hypothetical protein | VF |
| A8O29_RS00380 () | 73797..75392 | + | 1596 | WP_125354376.1 | hypothetical protein | VF |
| A8O29_RS00385 () | 75422..75988 | + | 567 | WP_125354377.1 | hypothetical protein | - |
| A8O29_RS00390 () | 76206..77969 | + | 1764 | WP_125354378.1 | hypothetical protein | VF |
| A8O29_RS00395 () | 77924..79027 | + | 1104 | WP_125354379.1 | hypothetical protein | VF |
| A8O29_RS00400 () | 79008..79544 | + | 537 | WP_168713861.1 | hypothetical protein | VF |
| A8O29_RS00405 () | 79537..79989 | + | 453 | WP_125354381.1 | hypothetical protein | VF |
| A8O29_RS00410 () | 80011..80484 | + | 474 | WP_125354382.1 | hypothetical protein | - |
| A8O29_RS00415 () | 80533..81882 | + | 1350 | WP_125354383.1 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| A8O29_RS00420 () | 81886..82650 | + | 765 | WP_125354384.1 | hypothetical protein | - |
| A8O29_RS00425 () | 82680..83006 | - | 327 | Protein_84 | HTH-type transcriptional regulator DmlR | VF |
| A8O29_RS00430 () | 83133..84203 | + | 1071 | WP_125354385.1 | alkene reductase | - |
| A8O29_RS00435 () | 84894..85111 | - | 218 | Protein_86 | aspartate aminotransferase family protein | - |
| A8O29_RS00450 () | 86175..86348 | + | 174 | Protein_87 | translation factor (SUA5) | - |
| A8O29_RS00455 () | 86479..86995 | - | 517 | Protein_88 | transposase | - |
| A8O29_RS00460 () | 87160..88268 | + | 1109 | WP_125352770.1 | IS3 family transposase ISRso16 | Transposase |
| A8O29_RS00465 () | 88481..88768 | + | 288 | WP_125352772.1 | hypothetical protein | - |
| A8O29_RS00470 () | 89120..89395 | - | 276 | WP_125352773.1 | hypothetical protein | - |
| A8O29_RS00475 () | 89823..90896 | - | 1074 | WP_125352775.1 | butyrate kinase | - |
| A8O29_RS00480 () | 90893..91807 | - | 915 | WP_125352777.1 | phosphate acetytransferase | - |
| A8O29_RS00485 () | 91853..92590 | - | 738 | WP_125352779.1 | Acetoacetyl-CoA reductase | VF |
| A8O29_RS00490 () | 92633..93820 | - | 1188 | WP_125352781.1 | acetyl-CoA C-acetyltransferase | - |
| A8O29_RS00495 () | 93911..94552 | - | 642 | WP_168713832.1 | helix-turn-helix domain-containing protein | - |
| A8O29_RS00500 () | 96298..97082 | + | 785 | Protein_97 | transposase | - |
| A8O29_RS00505 () | 97056..97367 | - | 312 | WP_174081174.1 | hypothetical protein | - |
| A8O29_RS00510 () | 97348..98379 | - | 1032 | WP_125355697.1 | IS630 family transposase ISEc33 | Transposase |
| A8O29_RS00515 () | 98758..99419 | - | 662 | Protein_100 | IS1 family transposase | - |
| A8O29_RS00520 () | 99585..100208 | - | 624 | WP_125355083.1 | helix-turn-helix domain-containing protein | - |
| A8O29_RS00525 () | 100272..100664 | - | 393 | WP_125355084.1 | Transposon Tn10 TetD protein | VF |
| A8O29_RS00530 () | 100823..103936 | - | 3114 | WP_125355085.1 | Multidrug export protein AcrF | VF |
| A8O29_RS00535 () | 103980..105080 | - | 1101 | WP_125355094.1 | Multidrug export protein AcrE | VF |
| A8O29_RS00540 () | 105388..105564 | + | 177 | WP_168713886.1 | hypothetical protein | - |
| A8O29_RS00545 () | 105800..106639 | + | 840 | WP_125355086.1 | small-conductance mechanosensitive channel MscS | - |
| A8O29_RS00555 () | 108340..109371 | - | 1032 | Protein_108 | IS110 family transposase | - |
| A8O29_RS00560 () | 109483..109728 | + | 246 | Protein_109 | IS5 family transposase IS903 | Transposase |
| A8O29_RS00565 () | 110227..110733 | + | 507 | WP_125355088.1 | DUF417 family protein | - |
| A8O29_RS00570 () | 110762..112018 | + | 1257 | WP_168713887.1 | beta-propeller fold lactonase family protein | - |
| A8O29_RS00575 () | 112189..112971 | + | 783 | WP_125355090.1 | hypothetical protein | - |
| A8O29_RS00580 () | 112971..113522 | + | 552 | WP_125355091.1 | hypothetical protein | - |
| A8O29_RS00585 () | 113559..113825 | + | 267 | WP_125355092.1 | DUF1471 domain-containing protein | - |
| A8O29_RS00590 () | 113876..114730 | - | 855 | WP_125355093.1 | IS3 family transposase ISEc14 | Transposase |
| A8O29_RS00595 () | 114727..115038 | - | 312 | WP_174081188.1 | IS3 family transposase ISEc14 | Transposase |
| A8O29_RS00600 () | 115049..116214 | + | 1166 | WP_125355789.1 | IS3 family transposase ISKpn37 | Transposase |
| A8O29_RS00605 () | 116444..116647 | - | 204 | WP_174081190.1 | hypothetical protein | - |
| A8O29_RS00610 () | 117082..117360 | - | 279 | Protein_119 | IS21 family transposase ISEc10 | Transposase |
| A8O29_RS00615 () | 117350..117601 | - | 252 | Protein_120 | LysR family transcriptional regulator | - |
| A8O29_RS00620 () | 117728..118798 | + | 1071 | WP_125354385.1 | alkene reductase | - |
| A8O29_RS00625 () | 119201..119338 | + | 138 | Protein_122 | DUF4113 domain-containing protein | - |
| A8O29_RS00630 () | 119595..120620 | - | 1026 | WP_125355882.1 | IS110 family transposase ISAve1 | Transposase |
| A8O29_RS00635 () | 120790..121944 | - | 1155 | WP_125355884.1 | low temperature requirement protein A | - |
| A8O29_RS00640 () | 123466..123810 | + | 345 | Protein_125 | GNAT family N-acetyltransferase | - |
| A8O29_RS00645 () | 124009..124482 | - | 474 | WP_168713907.1 | conjugal transfer protein TraF | - |
| A8O29_RS00650 () | 124531..125260 | - | 730 | Protein_127 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| A8O29_RS00655 () | 125993..126361 | - | 369 | Protein_128 | conjugal transfer protein | - |
| A8O29_RS00660 () | 127000..127736 | - | 737 | Protein_129 | DUF932 domain-containing protein | - |
| A8O29_RS00665 () | 127750..127965 | - | 216 | WP_125355913.1 | hypothetical protein | - |
| A8O29_RS00670 () | 128413..128571 | - | 159 | WP_125355911.1 | type I toxin-antitoxin system Hok family toxin | - |
| A8O29_RS00675 () | 128778..129044 | + | 267 | WP_125355910.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| A8O29_RS00680 () | 129032..129523 | + | 492 | WP_125355908.1 | GNAT family N-acetyltransferase | Toxin Detail |
| A8O29_RS00685 () | 129949..130728 | + | 780 | WP_125355906.1 | MBL fold metallo-hydrolase | - |
| A8O29_RS00690 () | 130857..131831 | + | 975 | WP_125355904.1 | HTH-type transcriptional regulator CdhR | VF |
| A8O29_RS00695 () | 132159..132425 | + | 267 | WP_001567383.1 | DUF1471 domain-containing protein | - |
| A8O29_RS00700 () | 132522..133079 | + | 558 | WP_125355976.1 | hypothetical protein | VF |
| A8O29_RS00705 () | 133292..133552 | + | 261 | WP_125355974.1 | DUF1471 domain-containing protein | - |
| A8O29_RS00710 () | 133583..134095 | + | 513 | WP_125355972.1 | DUF417 family protein | - |
| A8O29_RS00715 () | 134163..134300 | + | 138 | WP_021243014.1 | hypothetical protein | - |
| A8O29_RS00720 () | 134324..134785 | + | 462 | WP_174081191.1 | Peptide methionine sulfoxide reductase MsrB | VF |
| A8O29_RS00725 () | 134775..135269 | + | 495 | WP_001567377.1 | Peptide methionine sulfoxide reductase MsrA 3 | VF |
| A8O29_RS00730 () | 135853..137193 | - | 1341 | WP_125355571.1 | ISNCY family transposase ISCARN112 | Transposase |
| A8O29_RS00735 () | 137283..138815 | + | 1533 | WP_125355569.1 | IS3 family transposase ISKpn38 | Transposase |
| A8O29_RS00740 () | 138865..139224 | - | 360 | WP_125355846.1 | type I restriction-modification system subunit M | - |
| A8O29_RS00745 () | 139835..140815 | - | 981 | WP_125354882.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| A8O29_RS00750 () | 140815..141981 | - | 1167 | WP_125354880.1 | plasmid-partitioning protein SopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|