MGE detailed information
MGE type: Prophage MGE length: 66098 bp
Accession: NZ_CP054049 Location: 3108580..3174677 Organism: Yersinia kristensenii strain 2012N-4030 Replicon: chromosome
Accession: NZ_CP054049 Location: 3108580..3174677 Organism: Yersinia kristensenii strain 2012N-4030 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRD70_RS13850 () | 3103730..3105112 | + | 1383 | WP_050094935.1 | ATP-dependent RNA helicase DbpA | - |
| HRD70_RS13855 () | 3105208..3105528 | + | 321 | WP_050094934.1 | YebG family protein | - |
| HRD70_RS13860 () | 3105568..3105876 | + | 309 | WP_050094933.1 | N(4)-acetylcytidine aminohydrolase | - |
| HRD70_RS13865 () | 3105981..3106343 | + | 363 | WP_050094932.1 | protein YebF | - |
| HRD70_RS13870 () | 3106512..3108566 | + | 2055 | WP_050094931.1 | prolyl oligopeptidase family serine peptidase | - |
| HRD70_RS13875 () | 3108580..3109239 | - | 660 | WP_049562771.1 | exodeoxyribonuclease X | - |
| HRD70_RS13880 () | 3109758..3110714 | + | 957 | WP_049562769.1 | prolyl aminopeptidase | - |
| HRD70_RS13885 () | 3110764..3110997 | - | 234 | WP_049562767.1 | DNA polymerase III subunit theta | - |
| HRD70_RS13890 () | 3111391..3111900 | + | 510 | WP_004389930.1 | non-heme ferritin | - |
| HRD70_RS13895 () | 3112292..3112678 | + | 387 | WP_032819543.1 | CopC domain-containing protein YobA | - |
| HRD70_RS13900 () | 3112680..3113564 | + | 885 | WP_004389932.1 | copper homeostasis membrane protein CopD | - |
| HRD70_RS13905 () | 3113661..3114002 | + | 342 | WP_004389933.1 | YebY family protein | - |
| - () | 3114152..3114269 | - | 118 | - | - | Antitoxin Detail |
| - () | 3114174..3114268 | + | 95 | - | - | Toxin Detail |
| HRD70_RS13910 () | 3114344..3115453 | - | 1110 | WP_172986344.1 | hypothetical protein ; Integrase | Integrase |
| HRD70_RS13915 () | 3115428..3115697 | - | 270 | WP_050148866.1 | excisionase | - |
| HRD70_RS13920 () | 3115846..3116268 | + | 423 | WP_172986345.1 | GNAT family N-acetyltransferase | - |
| HRD70_RS13925 () | 3116285..3116485 | - | 201 | WP_172986346.1 | hypothetical protein | - |
| HRD70_RS13930 () | 3116485..3117087 | - | 603 | WP_172986347.1 | hypothetical protein | - |
| HRD70_RS13935 () | 3117295..3117486 | - | 192 | WP_172986348.1 | hypothetical protein | - |
| HRD70_RS13940 () | 3117790..3118593 | - | 804 | WP_172986608.1 | hypothetical protein | - |
| HRD70_RS13945 () | 3118628..3119272 | - | 645 | WP_172986349.1 | hypothetical protein | - |
| HRD70_RS13950 () | 3119275..3119703 | - | 429 | WP_172986609.1 | hypothetical protein | - |
| HRD70_RS13955 () | 3119700..3120839 | - | 1140 | WP_172986350.1 | hypothetical protein | - |
| HRD70_RS13960 () | 3120884..3122488 | - | 1605 | WP_172986351.1 | YqaJ viral recombinase family protein | - |
| HRD70_RS13965 () | 3122475..3123278 | - | 804 | WP_102990220.1 | phage recombination protein Bet | - |
| HRD70_RS13970 () | 3123331..3123480 | - | 150 | WP_154295109.1 | hypothetical protein | - |
| HRD70_RS13975 () | 3123646..3124275 | + | 630 | WP_172986352.1 | hypothetical protein | - |
| HRD70_RS13980 () | 3124264..3124554 | - | 291 | WP_145586234.1 | hypothetical protein | - |
| HRD70_RS13985 () | 3124617..3124886 | - | 270 | WP_172986353.1 | KTSC domain-containing protein | - |
| HRD70_RS13990 () | 3124970..3125215 | - | 246 | WP_172986354.1 | hypothetical protein | - |
| HRD70_RS13995 () | 3125339..3125866 | + | 528 | WP_050878761.1 | hypothetical protein | - |
| HRD70_RS14000 () | 3126217..3127110 | + | 894 | WP_057634125.1 | RES family NAD+ phosphorylase | - |
| HRD70_RS14005 () | 3127096..3127326 | - | 231 | WP_038244045.1 | hypothetical protein | - |
| HRD70_RS14010 () | 3127339..3128010 | - | 672 | WP_074008402.1 | helix-turn-helix domain-containing protein | - |
| HRD70_RS14015 () | 3128121..3128387 | + | 267 | WP_050126807.1 | hypothetical protein | - |
| HRD70_RS14020 () | 3128469..3128774 | - | 306 | WP_057634122.1 | hypothetical protein | - |
| HRD70_RS14025 () | 3128861..3129223 | + | 363 | WP_050130890.1 | hypothetical protein | - |
| HRD70_RS14030 () | 3129220..3129399 | + | 180 | WP_050298279.1 | hypothetical protein | - |
| HRD70_RS14035 () | 3129408..3130253 | + | 846 | WP_057634120.1 | hypothetical protein | - |
| HRD70_RS14040 () | 3130256..3131029 | + | 774 | WP_057634119.1 | hypothetical protein | - |
| HRD70_RS14045 () | 3131033..3132169 | + | 1137 | WP_057634116.1 | recombination-associated protein RdgC | - |
| HRD70_RS14050 () | 3132169..3132516 | + | 348 | WP_172986355.1 | hypothetical protein | - |
| HRD70_RS14055 () | 3132513..3133439 | + | 927 | WP_172986356.1 | site-specific DNA-methyltransferase | - |
| HRD70_RS14060 () | 3133436..3134323 | + | 888 | WP_172986357.1 | phage N-6-adenine-methyltransferase | - |
| HRD70_RS14065 () | 3134320..3136200 | + | 1881 | WP_057634112.1 | DNA cytosine methyltransferase | - |
| HRD70_RS14070 () | 3136197..3136844 | + | 648 | WP_057634111.1 | DUF1367 family protein | - |
| HRD70_RS14075 () | 3136846..3137163 | + | 318 | WP_057634110.1 | DUF1364 domain-containing protein | - |
| HRD70_RS14080 () | 3137238..3138170 | + | 933 | WP_053012611.1 | hypothetical protein | - |
| HRD70_RS14085 () | 3138167..3138637 | + | 471 | WP_057634109.1 | VRR-NUC domain-containing protein | - |
| HRD70_RS14090 () | 3138634..3139353 | + | 720 | WP_057634106.1 | hypothetical protein | - |
| HRD70_RS14095 () | 3139452..3140261 | + | 810 | WP_057634104.1 | hypothetical protein | - |
| HRD70_RS14100 () | 3140441..3140671 | + | 231 | WP_050126830.1 | hypothetical protein | - |
| HRD70_RS14105 () | 3140671..3141159 | + | 489 | WP_081009468.1 | lysozyme | - |
| HRD70_RS14110 () | 3141291..3141827 | + | 537 | WP_172986358.1 | DUF2570 domain-containing protein | - |
| HRD70_RS14115 () | 3141831..3142271 | + | 441 | WP_072081146.1 | DUF2829 domain-containing protein | - |
| HRD70_RS14120 () | 3142337..3143194 | + | 858 | WP_172986359.1 | terminase | - |
| HRD70_RS14125 () | 3143233..3144897 | + | 1665 | WP_172986610.1 | terminase | - |
| HRD70_RS14130 () | 3144897..3147017 | + | 2121 | WP_172986360.1 | portal protein | - |
| HRD70_RS14135 () | 3147287..3148360 | + | 1074 | WP_172986361.1 | hypothetical protein | - |
| HRD70_RS14140 () | 3148420..3149643 | + | 1224 | WP_172986362.1 | N4-gp56 family major capsid protein | - |
| HRD70_RS14145 () | 3149720..3150103 | + | 384 | WP_057634088.1 | hypothetical protein | - |
| HRD70_RS14150 () | 3150170..3150622 | + | 453 | WP_172986363.1 | hypothetical protein | - |
| HRD70_RS14155 () | 3150625..3151221 | + | 597 | WP_172986364.1 | hypothetical protein | - |
| HRD70_RS14160 () | 3151221..3151874 | + | 654 | WP_172986365.1 | hypothetical protein | - |
| HRD70_RS14165 () | 3151871..3153064 | + | 1194 | WP_172986366.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HRD70_RS14170 () | 3153077..3153517 | + | 441 | WP_172986367.1 | tail fiber assembly protein | - |
| HRD70_RS14175 () | 3153628..3155256 | + | 1629 | WP_172986368.1 | hypothetical protein | - |
| HRD70_RS14180 () | 3155253..3156359 | + | 1107 | WP_172986369.1 | DUF1983 domain-containing protein | - |
| HRD70_RS14185 () | 3156426..3157424 | + | 999 | WP_172986370.1 | hypothetical protein | - |
| HRD70_RS14190 () | 3157399..3157773 | + | 375 | WP_172986371.1 | hypothetical protein | - |
| HRD70_RS14195 () | 3158029..3158634 | + | 606 | WP_172986372.1 | hypothetical protein | - |
| HRD70_RS14200 () | 3158650..3159033 | + | 384 | WP_172986373.1 | hypothetical protein | - |
| HRD70_RS14205 () | 3159033..3159272 | + | 240 | WP_057634061.1 | hypothetical protein | - |
| HRD70_RS14210 () | 3159285..3160667 | + | 1383 | WP_057634059.1 | hypothetical protein | - |
| HRD70_RS14215 () | 3160727..3161557 | - | 831 | WP_053012591.1 | hypothetical protein | - |
| HRD70_RS14220 () | 3161649..3162128 | - | 480 | WP_053012590.1 | hypothetical protein | - |
| HRD70_RS14225 () | 3162316..3170643 | + | 8328 | WP_172986374.1 | hypothetical protein | - |
| HRD70_RS14230 () | 3171040..3172416 | + | 1377 | WP_172986375.1 | hypothetical protein | - |
| HRD70_RS14235 () | 3172427..3172831 | + | 405 | WP_172986376.1 | hypothetical protein | - |
| HRD70_RS14240 () | 3172888..3173181 | + | 294 | WP_172986611.1 | hypothetical protein | - |
| HRD70_RS14245 () | 3173318..3173530 | - | 213 | WP_172986221.1 | hypothetical protein | - |
| HRD70_RS14250 () | 3173841..3174485 | - | 645 | Protein_2768 | hypothetical protein ; Integrase | Integrase |
| HRD70_RS14255 () | 3174528..3174677 | - | 150 | Protein_2769 | IS3 family transposase ISSpr1 | Transposase |
| HRD70_RS14260 () | 3174764..3175927 | - | 1164 | WP_072085583.1 | class C beta-lactamase | - |
| HRD70_RS14265 () | 3176195..3176524 | - | 330 | WP_050094880.1 | hypothetical protein | - |
| HRD70_RS14270 () | 3176730..3177602 | + | 873 | WP_049560088.1 | 23S rRNA pseudouridine(2604) synthase RluF | - |
| HRD70_RS14275 () | 3177722..3178933 | - | 1212 | WP_050094879.1 | sodium/glutamate symporter | - |
| HRD70_RS14280 () | 3179265..3179459 | - | 195 | WP_032820964.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|