MGE detailed information
MGE type: IScluster/Tn MGE length: 19636 bp
Accession: NZ_CP054046 Location: 48476..68111 Organism: Yersinia massiliensis strain 2011N-4075 Replicon: plasmid unnamed1
Accession: NZ_CP054046 Location: 48476..68111 Organism: Yersinia massiliensis strain 2011N-4075 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRD68_RS00250 () | 43695..43931 | - | 237 | WP_172986735.1 | hypothetical protein | - |
| HRD68_RS00255 () | 44247..45227 | + | 981 | WP_172986736.1 | DUF1738 domain-containing protein | - |
| HRD68_RS00260 () | 45255..45503 | - | 249 | WP_172986737.1 | hypothetical protein | - |
| HRD68_RS00265 () | 45986..48148 | - | 2163 | WP_172986738.1 | type IA DNA topoisomerase | - |
| HRD68_RS00270 () | 48195..48413 | - | 219 | WP_172986739.1 | hypothetical protein | - |
| HRD68_RS00275 () | 48476..49171 | + | 696 | WP_019213468.1 | IS6 family transposase ISYps1 | Transposase |
| HRD68_RS00280 () | 49346..50082 | - | 737 | Protein_55 | IS6 family transposase IS1635 | Transposase |
| HRD68_RS00285 () | 50274..54506 | - | 4233 | WP_172986746.1 | Invasin | VF |
| HRD68_RS00290 () | 54691..55386 | - | 696 | WP_019213434.1 | IS6 family transposase ISYps1 | Transposase |
| HRD68_RS00295 () | 56156..58756 | + | 2601 | WP_145579294.1 | Outer membrane protein IcsA autotransporter | VF |
| HRD68_RS00300 () | 58871..59488 | + | 618 | WP_019213431.1 | Transcriptional regulatory protein TdiR | VF |
| HRD68_RS00305 () | 59753..60103 | - | 351 | WP_042807111.1 | hypothetical protein | - |
| HRD68_RS00310 () | 60178..60873 | - | 696 | WP_019213429.1 | IS6 family transposase ISYps1 | Transposase |
| HRD68_RS00315 () | 61355..61456 | - | 102 | Protein_62 | IS6 family transposase IS15DII | Transposase |
| HRD68_RS00320 () | 61782..62420 | + | 639 | WP_019213427.1 | DUF1120 domain-containing protein | - |
| HRD68_RS00325 () | 62904..63539 | + | 636 | WP_019213426.1 | DUF1120 domain-containing protein | - |
| HRD68_RS00330 () | 63609..63707 | - | 99 | Protein_65 | IS6 family transposase | - |
| HRD68_RS00335 () | 63738..64187 | + | 450 | WP_019213425.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| HRD68_RS00340 () | 64406..65101 | + | 696 | WP_019213424.1 | IS6 family transposase ISYps1 | Transposase |
| HRD68_RS00345 () | 65178..65894 | - | 717 | WP_081578887.1 | tyrosine-type recombinase/integrase | - |
| HRD68_RS00350 () | 66373..66690 | - | 318 | WP_019213422.1 | CcdB family protein | Toxin Detail |
| HRD68_RS00355 () | 66690..66935 | - | 246 | WP_019213421.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| HRD68_RS00360 () | 67229..67363 | - | 135 | Protein_71 | IS6 family transposase | - |
| HRD68_RS00365 () | 67416..68111 | - | 696 | WP_019213420.1 | IS6 family transposase ISYps1 | Transposase |
| HRD68_RS00370 () | 68315..68776 | + | 462 | WP_019213419.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| HRD68_RS00375 () | 68776..69351 | + | 576 | WP_042807110.1 | PIN domain-containing protein | Toxin Detail |
| HRD68_RS00380 () | 69662..70630 | + | 969 | WP_172986740.1 | recombinase family protein | - |
| HRD68_RS00385 () | 70668..71000 | - | 333 | WP_019213416.1 | hypothetical protein | - |
| HRD68_RS00390 () | 70997..71704 | - | 708 | WP_019213415.1 | ParA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|