MGE detailed information
MGE type: Genomic_island MGE length: 49529 bp
Accession: NZ_CP054021 Location: 4386771..4436299 Organism: Rhizobium indicum strain JKLM 12A2 Replicon: chromosome
Accession: NZ_CP054021 Location: 4386771..4436299 Organism: Rhizobium indicum strain JKLM 12A2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FFM53_RS21230 () | 4381944..4383458 | + | 1515 | WP_138387117.1 | DNA polymerase Y family protein | - |
| FFM53_RS21235 () | 4383455..4386718 | + | 3264 | WP_138387118.1 | error-prone DNA polymerase | - |
| FFM53_RS21240 () | 4386771..4387058 | - | 288 | WP_138387119.1 | hypothetical protein | - |
| FFM53_RS21245 () | 4387076..4387333 | - | 258 | WP_138387120.1 | hypothetical protein | - |
| FFM53_RS21250 () | 4387555..4388593 | + | 1039 | Protein_4184 | hypothetical protein | - |
| FFM53_RS21255 () | 4388746..4388982 | + | 237 | WP_138387489.1 | hypothetical protein | - |
| FFM53_RS21260 () | 4389060..4389536 | + | 477 | WP_138387490.1 | hypothetical protein | - |
| FFM53_RS21265 () | 4389662..4390435 | + | 774 | WP_138387121.1 | SOS response-associated peptidase | - |
| FFM53_RS21270 () | 4390736..4391572 | + | 837 | WP_138387123.1 | thermonuclease family protein | - |
| FFM53_RS21275 () | 4392194..4392493 | - | 300 | WP_138387125.1 | DUF982 domain-containing protein | - |
| FFM53_RS21280 () | 4393032..4393226 | + | 195 | WP_003577126.1 | hypothetical protein | - |
| FFM53_RS21285 () | 4393279..4393470 | + | 192 | WP_138387126.1 | hypothetical protein | - |
| FFM53_RS21290 () | 4393522..4393794 | - | 273 | WP_138387491.1 | hypothetical protein | - |
| FFM53_RS21295 () | 4394096..4394593 | - | 498 | WP_138387127.1 | SRPBCC domain-containing protein | - |
| FFM53_RS21300 () | 4394672..4395466 | - | 795 | WP_130685733.1 | SDR family oxidoreductase | - |
| FFM53_RS21305 () | 4395543..4396043 | - | 501 | WP_138387128.1 | SRPBCC domain-containing protein | - |
| FFM53_RS21310 () | 4396047..4396649 | - | 603 | WP_130685731.1 | NADPH-dependent F420 reductase | - |
| FFM53_RS21315 () | 4396805..4397722 | + | 918 | WP_130685730.1 | LysR family transcriptional regulator | - |
| FFM53_RS36180 () | 4397836..4398003 | - | 168 | WP_210273014.1 | hypothetical protein | - |
| FFM53_RS21325 () | 4399239..4400396 | + | 1158 | WP_138387129.1 | cystathionine gamma-synthase | - |
| FFM53_RS21330 () | 4400684..4400989 | - | 306 | WP_130658211.1 | hypothetical protein | - |
| FFM53_RS21335 () | 4401405..4401545 | - | 141 | WP_173883617.1 | hypothetical protein | - |
| FFM53_RS21340 () | 4402290..4402658 | - | 369 | WP_138387130.1 | DUF488 domain-containing protein | - |
| FFM53_RS21345 () | 4402799..4403455 | + | 657 | WP_138387131.1 | fructose-6-phosphate aldolase | - |
| FFM53_RS21350 () | 4403932..4404753 | + | 822 | WP_138387132.1 | universal stress protein | - |
| FFM53_RS21355 () | 4404909..4405268 | - | 360 | WP_138387133.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| FFM53_RS21360 () | 4405268..4405531 | - | 264 | WP_037063579.1 | PbsX family transcriptional regulator | Antitoxin Detail |
| FFM53_RS21365 () | 4406175..4406930 | + | 756 | WP_138387134.1 | IS1595 family transposase ISCausp4 | Transposase |
| FFM53_RS21370 () | 4406927..4407388 | - | 462 | WP_138387135.1 | hypothetical protein | - |
| FFM53_RS21375 () | 4407598..4408245 | - | 648 | WP_197729628.1 | uracil-DNA glycosylase family protein | - |
| FFM53_RS21380 () | 4408781..4411279 | + | 2499 | WP_138387136.1 | NAD-dependent epimerase/dehydratase family protein | - |
| FFM53_RS21385 () | 4411864..4413543 | - | 1680 | WP_138387137.1 | adenylate/guanylate cyclase domain-containing protein | - |
| FFM53_RS21390 () | 4414282..4415877 | - | 1596 | WP_138387138.1 | cytochrome c oxidase subunit I | - |
| FFM53_RS21395 () | 4416435..4417082 | + | 648 | WP_138387139.1 | BON domain-containing protein | - |
| FFM53_RS21400 () | 4417398..4418942 | - | 1545 | WP_130685717.1 | FAD-dependent oxidoreductase | - |
| FFM53_RS21405 () | 4419297..4419596 | - | 300 | WP_138387140.1 | XRE family transcriptional regulator | - |
| FFM53_RS21410 () | 4419983..4420483 | - | 501 | WP_130657961.1 | PTS sugar transporter subunit IIA | - |
| FFM53_RS21415 () | 4420979..4421392 | + | 414 | WP_138387141.1 | hypothetical protein | - |
| FFM53_RS21420 () | 4421389..4421916 | + | 528 | WP_173883618.1 | hypothetical protein | - |
| FFM53_RS21425 () | 4422026..4422817 | + | 792 | WP_138387492.1 | two-component sensor histidine kinase | - |
| FFM53_RS21430 () | 4422826..4423677 | - | 852 | WP_130660652.1 | LysR family transcriptional regulator | - |
| FFM53_RS21435 () | 4424247..4425143 | + | 897 | WP_138387142.1 | universal stress protein | - |
| FFM53_RS21440 () | 4425304..4425666 | - | 363 | WP_130660650.1 | monovalent cation/H(+) antiporter subunit G | - |
| FFM53_RS21445 () | 4425663..4425944 | - | 282 | WP_130657956.1 | K+/H+ antiporter subunit F | - |
| FFM53_RS21450 () | 4425941..4426417 | - | 477 | WP_130685713.1 | Na+/H+ antiporter subunit E | - |
| FFM53_RS21455 () | 4426419..4428038 | - | 1620 | WP_173883619.1 | monovalent cation/H+ antiporter subunit D | - |
| FFM53_RS21460 () | 4428035..4428373 | - | 339 | WP_130660647.1 | Na+/H+ antiporter subunit C | - |
| FFM53_RS21465 () | 4428373..4431276 | - | 2904 | WP_138387143.1 | monovalent cation/H+ antiporter subunit A | - |
| FFM53_RS21470 () | 4431392..4431658 | + | 267 | WP_130657951.1 | helix-turn-helix transcriptional regulator | - |
| FFM53_RS21475 () | 4431873..4432286 | - | 414 | WP_138387144.1 | nucleoside diphosphate kinase regulator | - |
| FFM53_RS21480 () | 4432612..4432866 | - | 255 | WP_138387145.1 | hypothetical protein | - |
| FFM53_RS21485 () | 4432921..4433343 | + | 423 | WP_130657948.1 | GreA/GreB family elongation factor | - |
| FFM53_RS21490 () | 4434166..4434690 | + | 525 | WP_138387146.1 | transcription elongation factor GreAB | - |
| FFM53_RS21495 () | 4435354..4435644 | + | 291 | WP_138387147.1 | hypothetical protein | - |
| FFM53_RS21500 () | 4435838..4436299 | + | 462 | WP_138387148.1 | GreA/GreB family elongation factor | - |
| FFM53_RS21505 () | 4436423..4436557 | - | 135 | WP_138387149.1 | YHYH domain-containing protein | - |
| FFM53_RS21510 () | 4436766..4437152 | - | 387 | WP_173883620.1 | SH3 domain-containing protein | - |
| FFM53_RS21515 () | 4437481..4439391 | - | 1911 | WP_138387151.1 | protein kinase domain-containing protein | - |
| FFM53_RS21520 () | 4439388..4440158 | - | 771 | WP_138387152.1 | protein phosphatase 2C domain-containing protein | - |
| FFM53_RS21525 () | 4440155..4440835 | - | 681 | WP_138387153.1 | VWA domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|