MGE detailed information
MGE type: Prophage MGE length: 73735 bp
Accession: NZ_CP053922 Location: 1456717..1530451 Organism: Pseudomonas aeruginosa strain YD001 Replicon: chromosome
Accession: NZ_CP053922 Location: 1456717..1530451 Organism: Pseudomonas aeruginosa strain YD001 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HQN50_RS06760 () | 1452807..1453658 | + | 852 | WP_003113869.1 | S-formylglutathione hydrolase | - |
| HQN50_RS06765 () | 1453729..1454202 | + | 474 | WP_003098560.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| HQN50_RS06770 () | 1454199..1455266 | + | 1068 | WP_023088112.1 | tRNA pseudouridine(13) synthase TruD | - |
| HQN50_RS06775 () | 1455254..1456003 | + | 750 | WP_003092341.1 | 5'/3'-nucleotidase SurE | - |
| HQN50_RS06780 () | 1456036..1456671 | + | 636 | WP_003098558.1 | protein-L-isoaspartate(D-aspartate) O-methyltransferase | - |
| HQN50_RS06785 () | 1456717..1457610 | + | 894 | WP_003115226.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| HQN50_RS06790 () | 1457715..1458719 | + | 1005 | WP_003113871.1 | RNA polymerase sigma factor RpoS | - |
| HQN50_RS06795 () | 1459146..1459469 | - | 324 | WP_003092272.1 | ferredoxin family protein | - |
| HQN50_RS06800 () | 1459536..1462115 | - | 2580 | WP_003105609.1 | DNA mismatch repair protein MutS | - |
| HQN50_RS06805 () | 1462175..1463149 | - | 975 | WP_077563222.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HQN50_RS06810 () | 1463159..1463368 | - | 210 | WP_071538228.1 | DUF4224 domain-containing protein | - |
| HQN50_RS06815 () | 1463586..1463876 | - | 291 | WP_096861746.1 | hypothetical protein | - |
| HQN50_RS06820 () | 1463949..1464332 | - | 384 | WP_041025216.1 | HNH endonuclease | - |
| HQN50_RS06825 () | 1464434..1464631 | - | 198 | Protein_1352 | hypothetical protein | - |
| HQN50_RS06830 () | 1464624..1464998 | - | 375 | Protein_1353 | hypothetical protein | - |
| HQN50_RS06835 () | 1465570..1466700 | - | 1131 | WP_129754580.1 | hypothetical protein | - |
| HQN50_RS06840 () | 1466697..1466903 | - | 207 | WP_003140732.1 | hypothetical protein | - |
| HQN50_RS06845 () | 1466867..1467115 | - | 249 | WP_129754579.1 | hypothetical protein | - |
| HQN50_RS06850 () | 1467127..1468173 | - | 1047 | WP_172792794.1 | DNA cytosine methyltransferase | - |
| HQN50_RS06855 () | 1468200..1468730 | - | 531 | Protein_1358 | DUF4406 domain-containing protein | - |
| HQN50_RS06860 () | 1468727..1469104 | - | 378 | WP_073652347.1 | hypothetical protein | - |
| HQN50_RS06865 () | 1469171..1469473 | - | 303 | WP_172792795.1 | hypothetical protein | - |
| HQN50_RS06870 () | 1469473..1470144 | - | 672 | WP_172792796.1 | hypothetical protein | - |
| HQN50_RS06875 () | 1470358..1470606 | - | 249 | WP_105753167.1 | hypothetical protein | - |
| HQN50_RS06880 () | 1470617..1471000 | - | 384 | WP_033950050.1 | LuxR family transcriptional regulator | - |
| HQN50_RS06885 () | 1471318..1472235 | - | 918 | WP_172792797.1 | hypothetical protein | - |
| HQN50_RS06895 () | 1472476..1472685 | - | 210 | WP_016263613.1 | hypothetical protein | - |
| HQN50_RS06900 () | 1472725..1473510 | - | 786 | WP_057391413.1 | hypothetical protein | - |
| HQN50_RS06905 () | 1474013..1474267 | + | 255 | WP_172792798.1 | DUF1654 domain-containing protein | - |
| HQN50_RS06910 () | 1474300..1474536 | - | 237 | WP_023117102.1 | type II toxin-antitoxin system HicA family toxin | - |
| HQN50_RS06915 () | 1474612..1474869 | - | 258 | Protein_1369 | DUF1902 domain-containing protein | - |
| HQN50_RS06920 () | 1475137..1475892 | - | 756 | WP_172792799.1 | helix-turn-helix transcriptional regulator | - |
| HQN50_RS06925 () | 1476404..1477105 | + | 702 | WP_172792800.1 | phage regulatory protein/antirepressor Ant | - |
| HQN50_RS06930 () | 1477170..1477931 | + | 762 | WP_172792801.1 | helix-turn-helix domain-containing protein | - |
| HQN50_RS06935 () | 1477928..1478611 | + | 684 | WP_033991849.1 | hypothetical protein | - |
| HQN50_RS06940 () | 1478608..1478814 | + | 207 | WP_003159465.1 | hypothetical protein | - |
| HQN50_RS06945 () | 1478811..1479182 | + | 372 | WP_031630618.1 | recombinase | - |
| HQN50_RS06950 () | 1479179..1479526 | + | 348 | WP_172792802.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HQN50_RS06955 () | 1479523..1479822 | + | 300 | WP_172792803.1 | hypothetical protein | - |
| HQN50_RS06960 () | 1479824..1480198 | + | 375 | WP_121335454.1 | hypothetical protein | - |
| HQN50_RS06965 () | 1480349..1480777 | - | 429 | WP_003124172.1 | hypothetical protein | Antitoxin Detail |
| HQN50_RS06970 () | 1480824..1481006 | - | 183 | WP_033971890.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| HQN50_RS06975 () | 1481207..1481521 | + | 315 | WP_015649339.1 | phage holin, lambda family | - |
| HQN50_RS06980 () | 1481521..1482138 | + | 618 | WP_172792804.1 | glycoside hydrolase family 19 protein | - |
| HQN50_RS06985 () | 1482138..1482608 | + | 471 | WP_172792805.1 | lysis system i-spanin subunit Rz | - |
| HQN50_RS06990 () | 1482605..1483348 | + | 744 | WP_003159066.1 | hypothetical protein | - |
| HQN50_RS06995 () | 1483468..1484013 | + | 546 | WP_023083814.1 | terminase small subunit | - |
| HQN50_RS07000 () | 1483985..1485961 | + | 1977 | WP_034059294.1 | phage terminase large subunit family protein | - |
| HQN50_RS07005 () | 1485958..1486176 | + | 219 | WP_034014260.1 | hypothetical protein | - |
| HQN50_RS07010 () | 1486173..1487819 | + | 1647 | WP_031640291.1 | phage portal protein | - |
| HQN50_RS07015 () | 1487794..1489884 | + | 2091 | WP_172792806.1 | ATP-dependent Clp protease proteolytic subunit 1 | VF |
| HQN50_RS07020 () | 1489951..1490268 | + | 318 | WP_012613583.1 | DUF2190 family protein | - |
| HQN50_RS07025 () | 1490265..1490594 | + | 330 | WP_172792807.1 | hypothetical protein | - |
| HQN50_RS07030 () | 1490591..1491061 | + | 471 | WP_034014263.1 | hypothetical protein | - |
| HQN50_RS07035 () | 1491065..1491259 | + | 195 | WP_015980908.1 | hypothetical protein | - |
| HQN50_RS07040 () | 1491261..1492013 | + | 753 | WP_015980909.1 | hypothetical protein | - |
| HQN50_RS07045 () | 1492095..1492616 | + | 522 | WP_049950365.1 | GspH/FimT family pseudopilin | - |
| HQN50_RS07050 () | 1492688..1493215 | + | 528 | WP_172792808.1 | DUF4124 domain-containing protein | - |
| HQN50_RS07055 () | 1493278..1493580 | + | 303 | WP_033946351.1 | hypothetical protein | - |
| HQN50_RS07060 () | 1493683..1496166 | + | 2484 | WP_172792809.1 | tape measure protein | - |
| HQN50_RS07065 () | 1496206..1496727 | + | 522 | WP_023114587.1 | hypothetical protein | - |
| HQN50_RS07070 () | 1496727..1498424 | + | 1698 | WP_172792810.1 | hypothetical protein | - |
| HQN50_RS07075 () | 1498427..1498837 | + | 411 | WP_058165590.1 | hypothetical protein | - |
| HQN50_RS07080 () | 1498837..1499382 | + | 546 | WP_128663785.1 | hypothetical protein | - |
| HQN50_RS07085 () | 1499393..1499815 | + | 423 | WP_043106299.1 | hypothetical protein | - |
| HQN50_RS07090 () | 1499802..1501301 | + | 1500 | WP_172792811.1 | hypothetical protein | - |
| HQN50_RS07095 () | 1501324..1501911 | + | 588 | WP_058165587.1 | hypothetical protein | - |
| HQN50_RS07100 () | 1501904..1502095 | + | 192 | WP_058139559.1 | hypothetical protein | - |
| HQN50_RS07105 () | 1502100..1502660 | + | 561 | WP_058019610.1 | hypothetical protein | - |
| HQN50_RS07110 () | 1502661..1502942 | + | 282 | WP_058139561.1 | hypothetical protein | - |
| HQN50_RS07115 () | 1503498..1503800 | + | 303 | WP_034011739.1 | hypothetical protein | - |
| HQN50_RS07120 () | 1503797..1504036 | + | 240 | WP_043106291.1 | hypothetical protein | - |
| HQN50_RS07125 () | 1504065..1504337 | + | 273 | WP_023109386.1 | hypothetical protein | - |
| HQN50_RS07130 () | 1504705..1505712 | - | 1008 | WP_003098486.1 | TolB family protein | - |
| HQN50_RS07135 () | 1505860..1506366 | + | 507 | WP_003143267.1 | CinA family protein | - |
| HQN50_RS07140 () | 1506500..1507540 | + | 1041 | WP_003092260.1 | recombinase RecA | - |
| HQN50_RS07145 () | 1507546..1508007 | + | 462 | WP_003119355.1 | recombination regulator RecX | - |
| HQN50_RS07150 () | 1508029..1509099 | - | 1071 | WP_003092255.1 | LOG family protein | - |
| HQN50_RS07155 () | 1509182..1510585 | - | 1404 | WP_003098484.1 | MBL fold metallo-hydrolase | - |
| HQN50_RS07160 () | 1510765..1513170 | + | 2406 | WP_003113876.1 | phosphoketolase | - |
| HQN50_RS07165 () | 1513294..1513515 | - | 222 | WP_003092249.1 | DUF3820 family protein | - |
| HQN50_RS07170 () | 1513534..1513944 | - | 411 | WP_003092248.1 | quorum-sensing-regulated virulence factor family protein | - |
| HQN50_RS07175 () | 1514120..1515184 | - | 1065 | WP_017002184.1 | spermidine/putrescine ABC transporter substrate-binding protein | - |
| HQN50_RS07180 () | 1515273..1516043 | - | 771 | WP_003092244.1 | ABC transporter permease | - |
| HQN50_RS07185 () | 1516036..1516929 | - | 894 | WP_003143268.1 | ABC transporter permease | - |
| HQN50_RS07190 () | 1516934..1518025 | - | 1092 | WP_003119359.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| HQN50_RS07195 () | 1518284..1519000 | + | 717 | WP_003098478.1 | DTW domain-containing protein | - |
| HQN50_RS07200 () | 1519004..1519930 | - | 927 | WP_003119360.1 | DMT family transporter | - |
| HQN50_RS07205 () | 1520063..1520716 | + | 654 | WP_003092229.1 | response regulator transcription factor | - |
| HQN50_RS07210 () | 1520788..1521159 | + | 372 | WP_003092226.1 | diacylglycerol kinase | - |
| HQN50_RS07215 () | 1521229..1522839 | - | 1611 | WP_003092223.1 | FMN-binding glutamate synthase family protein | - |
| HQN50_RS07220 () | 1523083..1523346 | + | 264 | WP_003092213.1 | type B 50S ribosomal protein L31 | - |
| HQN50_RS07225 () | 1523346..1523498 | + | 153 | WP_003092209.1 | type B 50S ribosomal protein L36 | - |
| HQN50_RS07230 () | 1523526..1524311 | - | 786 | WP_003092207.1 | helix-turn-helix transcriptional regulator | - |
| HQN50_RS07235 () | 1524439..1525254 | + | 816 | WP_003092205.1 | carbon-nitrogen hydrolase family protein | - |
| HQN50_RS07240 () | 1525454..1526776 | + | 1323 | WP_003109706.1 | APC family permease | - |
| HQN50_RS07245 () | 1526866..1527939 | + | 1074 | WP_003098473.1 | trifunctional transcriptional activator/DNA repair protein Ada/methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| HQN50_RS07250 () | 1527936..1529345 | - | 1410 | WP_003098472.1 | MHS family MFS transporter | - |
| HQN50_RS07255 () | 1529564..1530451 | - | 888 | WP_003092195.1 | HTH-type transcriptional regulator BenM | VF |
| HQN50_RS07260 () | 1530565..1532292 | + | 1728 | WP_003098471.1 | acyl-CoA dehydrogenase | - |
| HQN50_RS07265 () | 1532331..1533518 | + | 1188 | WP_003143270.1 | CoA transferase | - |
| HQN50_RS07270 () | 1533578..1534375 | + | 798 | WP_010793349.1 | enoyl-CoA hydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|