MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 50559 bp
Accession: NZ_CP053891 Location: 190965..241523 Organism: Streptococcus agalactiae strain GBS20 Replicon: chromosome
Accession: NZ_CP053891 Location: 190965..241523 Organism: Streptococcus agalactiae strain GBS20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HQ616_RS01095 (HQ616_01095) | 186440..186805 | + | 366 | WP_000285373.1 | DUF1033 family protein | - |
| HQ616_RS01100 (HQ616_01100) | 186978..187949 | + | 972 | WP_000250805.1 | competence type IV pilus ATPase ComGA | - |
| HQ616_RS01105 (HQ616_01105) | 187843..188886 | + | 1044 | WP_223295889.1 | competence type IV pilus assembly protein ComGB | - |
| HQ616_RS01110 (HQ616_01110) | 188883..189212 | + | 330 | WP_000793380.1 | competence type IV pilus major pilin ComGC | - |
| HQ616_RS01115 (HQ616_01115) | 189187..189600 | + | 414 | WP_000244261.1 | competence type IV pilus minor pilin ComGD | - |
| HQ616_RS01120 (HQ616_01120) | 189626..189871 | + | 246 | WP_000521801.1 | competence type IV pilus minor pilin ComGE | - |
| HQ616_RS01125 (HQ616_01125) | 189825..190286 | + | 462 | WP_001878820.1 | competence type IV pilus minor pilin ComGF | - |
| HQ616_RS01130 (HQ616_01130) | 190264..190635 | + | 372 | WP_000601104.1 | competence type IV pilus minor pilin ComGG | - |
| HQ616_RS01135 (HQ616_01135) | 190750..191724 | + | 975 | WP_001008574.1 | N-6 DNA methylase | - |
| HQ616_RS01140 (HQ616_01140) | 191756..192949 | + | 1194 | WP_000047534.1 | acetate kinase | - |
| HQ616_RS01145 (HQ616_01145) | 193101..193307 | + | 207 | WP_000798241.1 | hypothetical protein | VF |
| HQ616_RS01150 (HQ616_01150) | 193366..193503 | + | 138 | WP_001865900.1 | hypothetical protein | - |
| HQ616_RS01155 (HQ616_01155) | 193544..193999 | + | 456 | WP_000905673.1 | hypothetical protein | - |
| HQ616_RS01160 (HQ616_01160) | 194068..194733 | + | 666 | WP_000008113.1 | type II CAAX endopeptidase family protein | - |
| HQ616_RS01165 (HQ616_01165) | 194754..195524 | - | 771 | WP_001865901.1 | pyrroline-5-carboxylate reductase | - |
| HQ616_RS01170 (HQ616_01170) | 195594..196661 | - | 1068 | WP_001281323.1 | glutamyl aminopeptidase | - |
| HQ616_RS01175 (HQ616_01175) | 196846..197085 | - | 240 | WP_000660180.1 | hypothetical protein | - |
| HQ616_RS01180 (HQ616_01180) | 197246..197530 | + | 285 | WP_000791272.1 | DUF4651 domain-containing protein | - |
| HQ616_RS01185 (HQ616_01185) | 197527..197850 | + | 324 | WP_000602781.1 | thioredoxin family protein | - |
| HQ616_RS01190 (HQ616_01190) | 197883..198509 | + | 627 | WP_000578328.1 | DUF4479 and tRNA-binding domain-containing protein | - |
| HQ616_RS01195 (HQ616_01195) | 198563..199279 | - | 717 | WP_000186185.1 | class I SAM-dependent methyltransferase | - |
| HQ616_RS01200 (HQ616_01200) | 199360..199755 | + | 396 | WP_000282447.1 | single-stranded DNA-binding protein | - |
| HQ616_RS01205 (HQ616_01205) | 199879..200523 | + | 645 | WP_000416612.1 | HAD family hydrolase | - |
| HQ616_RS01210 (HQ616_01210) | 200550..202295 | + | 1746 | WP_000930334.1 | Sensor histidine kinase YpdA | VF |
| HQ616_RS01215 (HQ616_01215) | 202276..203016 | + | 741 | WP_000697630.1 | LytTR family transcriptional regulator DNA-binding domain-containing protein | - |
| HQ616_RS01220 (HQ616_01220) | 203186..203641 | + | 456 | WP_000683316.1 | CidA/LrgA family protein | - |
| HQ616_RS01225 (HQ616_01225) | 203643..204371 | + | 729 | WP_000421726.1 | antiholin-like protein LrgB | - |
| HQ616_RS01230 (HQ616_01230) | 204614..206242 | + | 1629 | WP_000170504.1 | ABC transporter substrate-binding protein | - |
| HQ616_RS01235 (HQ616_01235) | 206355..207332 | + | 978 | WP_000680645.1 | ABC transporter permease | - |
| HQ616_RS01240 (HQ616_01240) | 207329..208150 | + | 822 | WP_000603397.1 | ABC transporter permease | - |
| HQ616_RS01245 (HQ616_01245) | 208162..208965 | + | 804 | WP_000140984.1 | ABC transporter ATP-binding protein | - |
| HQ616_RS01250 (HQ616_01250) | 208949..209575 | + | 627 | WP_000171311.1 | ABC transporter ATP-binding protein | - |
| HQ616_RS01255 (HQ616_01255) | 209858..211888 | + | 2031 | WP_000434616.1 | PTS system trehalose-specific EIIBC component | - |
| HQ616_RS01260 (HQ616_01260) | 212110..213735 | + | 1626 | WP_000151017.1 | alpha,alpha-phosphotrehalase | - |
| HQ616_RS01265 (HQ616_01265) | 213951..215987 | + | 2037 | WP_000228180.1 | BglG family transcription antiterminator | - |
| HQ616_RS01270 (HQ616_01270) | 215990..216274 | + | 285 | WP_000944235.1 | PTS sugar transporter subunit IIB | - |
| HQ616_RS01275 (HQ616_01275) | 216287..217642 | + | 1356 | WP_000677351.1 | PTS ascorbate transporter subunit IIC | - |
| HQ616_RS01280 (HQ616_01280) | 217645..218502 | + | 858 | WP_000203489.1 | transketolase | - |
| HQ616_RS01285 (HQ616_01285) | 218499..219428 | + | 930 | WP_001203821.1 | transketolase C-terminal domain-containing protein | - |
| HQ616_RS01290 (HQ616_01290) | 219537..220796 | + | 1260 | WP_001203071.1 | ferric reductase-like transmembrane domain-containing protein | - |
| HQ616_RS01295 (HQ616_01295) | 220884..221153 | + | 270 | WP_001018249.1 | 30S ribosomal protein S15 | - |
| HQ616_RS01300 (HQ616_01300) | 221534..223663 | + | 2130 | WP_000043850.1 | polyribonucleotide nucleotidyltransferase | - |
| HQ616_RS01305 (HQ616_01305) | 223665..224417 | + | 753 | WP_000204782.1 | SseB family protein | - |
| HQ616_RS01310 (HQ616_01310) | 224426..225010 | + | 585 | WP_000539954.1 | serine O-acetyltransferase | - |
| HQ616_RS01315 (HQ616_01315) | 225020..225202 | + | 183 | WP_000656476.1 | lipoprotein | - |
| HQ616_RS01320 (HQ616_01320) | 225199..226542 | + | 1344 | WP_000591125.1 | cysteine--tRNA ligase | - |
| HQ616_RS01325 (HQ616_01325) | 226535..226921 | + | 387 | WP_000568029.1 | Mini-ribonuclease 3 | - |
| HQ616_RS01330 (HQ616_01330) | 227024..227779 | + | 756 | WP_000178026.1 | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | - |
| HQ616_RS01335 (HQ616_01335) | 227776..228294 | + | 519 | WP_000716636.1 | NYN domain-containing protein | - |
| HQ616_RS01340 (HQ616_01340) | 228387..229247 | + | 861 | WP_000143135.1 | DegV family protein | - |
| HQ616_RS01345 | 229784..229903 | + | 120 | Protein_209 | helix-turn-helix domain-containing protein | - |
| HQ616_RS01350 (HQ616_01345) | 230128..230574 | + | 447 | WP_001865567.1 | 50S ribosomal protein L13 | - |
| HQ616_RS01355 (HQ616_01350) | 230595..230987 | + | 393 | WP_000035940.1 | 30S ribosomal protein S9 | - |
| HQ616_RS01360 (HQ616_01355) | 231115..232269 | - | 1155 | WP_000022164.1 | Prophage integrase IntS ; Integrase | Integrase |
| HQ616_RS01365 (HQ616_01360) | 232333..232923 | - | 591 | WP_000181098.1 | helix-turn-helix transcriptional regulator | - |
| HQ616_RS01370 (HQ616_01365) | 233078..233383 | + | 306 | WP_000331954.1 | hypothetical protein | - |
| HQ616_RS01375 (HQ616_01370) | 233519..233797 | + | 279 | WP_000134670.1 | hypothetical protein | - |
| HQ616_RS01380 (HQ616_01375) | 233808..234038 | + | 231 | WP_000360142.1 | hypothetical protein | - |
| HQ616_RS01385 (HQ616_01380) | 234051..234377 | + | 327 | WP_000384270.1 | replication initiator protein A | - |
| HQ616_RS01390 (HQ616_01385) | 234381..235010 | + | 630 | WP_000591148.1 | hypothetical protein | - |
| HQ616_RS01395 (HQ616_01390) | 235323..236198 | + | 876 | WP_000770113.1 | hypothetical protein | - |
| HQ616_RS01400 (HQ616_01395) | 236234..236668 | + | 435 | WP_001220479.1 | hypothetical protein | - |
| HQ616_RS01405 (HQ616_01400) | 236984..238240 | + | 1257 | WP_000122832.1 | MobV family relaxase | - |
| HQ616_RS01410 (HQ616_01405) | 238408..238878 | + | 471 | WP_000130119.1 | hypothetical protein | - |
| HQ616_RS01415 (HQ616_01410) | 239183..239518 | - | 336 | WP_000384858.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HQ616_RS01420 (HQ616_01415) | 239508..239795 | - | 288 | WP_000255538.1 | hypothetical protein | Antitoxin Detail |
| HQ616_RS01425 (HQ616_01420) | 240198..241418 | - | 1221 | WP_000156558.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HQ616_RS01430 (HQ616_01425) | 241479..241739 | - | 261 | WP_001196072.1 | helix-turn-helix domain-containing protein | - |
| HQ616_RS01435 (HQ616_01430) | 241751..242497 | - | 747 | WP_000966632.1 | hypothetical protein | - |
| HQ616_RS01440 (HQ616_01435) | 242683..243474 | - | 792 | WP_001868842.1 | hypothetical protein | - |
| HQ616_RS01445 (HQ616_01440) | 243455..243988 | - | 534 | WP_000680721.1 | hypothetical protein | - |
| HQ616_RS01450 (HQ616_01445) | 243988..244326 | - | 339 | WP_001187920.1 | hypothetical protein | - |
| HQ616_RS01455 (HQ616_01450) | 244509..245438 | + | 930 | WP_000381084.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|