MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 62042 bp
Accession: NZ_CP053888 Location: 190600..252641 Organism: Streptococcus agalactiae strain SS44 Replicon: chromosome
Accession: NZ_CP053888 Location: 190600..252641 Organism: Streptococcus agalactiae strain SS44 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HQ615_RS01075 (HQ615_01075) | 186075..186440 | + | 366 | WP_000285373.1 | DUF1033 family protein | - |
| HQ615_RS01080 (HQ615_01080) | 186613..187584 | + | 972 | WP_000250805.1 | competence type IV pilus ATPase ComGA | - |
| HQ615_RS01085 (HQ615_01085) | 187478..188521 | + | 1044 | WP_223295889.1 | competence type IV pilus assembly protein ComGB | - |
| HQ615_RS01090 (HQ615_01090) | 188518..188847 | + | 330 | WP_000793380.1 | competence type IV pilus major pilin ComGC | - |
| HQ615_RS01095 (HQ615_01095) | 188822..189235 | + | 414 | WP_000244261.1 | competence type IV pilus minor pilin ComGD | - |
| HQ615_RS01100 (HQ615_01100) | 189261..189506 | + | 246 | WP_000521801.1 | competence type IV pilus minor pilin ComGE | - |
| HQ615_RS01105 (HQ615_01105) | 189460..189921 | + | 462 | WP_001878820.1 | competence type IV pilus minor pilin ComGF | - |
| HQ615_RS01110 (HQ615_01110) | 189899..190270 | + | 372 | WP_000601104.1 | competence type IV pilus minor pilin ComGG | - |
| HQ615_RS01115 (HQ615_01115) | 190385..191359 | + | 975 | WP_001008574.1 | N-6 DNA methylase | - |
| HQ615_RS01120 (HQ615_01120) | 191391..192584 | + | 1194 | WP_000047534.1 | acetate kinase | - |
| HQ615_RS01125 (HQ615_01125) | 192736..192942 | + | 207 | WP_000798241.1 | hypothetical protein | VF |
| HQ615_RS01130 (HQ615_01130) | 193001..193138 | + | 138 | WP_001865900.1 | hypothetical protein | - |
| HQ615_RS01135 (HQ615_01135) | 193179..193634 | + | 456 | WP_000905673.1 | hypothetical protein | - |
| HQ615_RS01140 (HQ615_01140) | 193703..194368 | + | 666 | WP_000008113.1 | type II CAAX endopeptidase family protein | - |
| HQ615_RS01145 (HQ615_01145) | 194389..195159 | - | 771 | WP_001865901.1 | pyrroline-5-carboxylate reductase | - |
| HQ615_RS01150 (HQ615_01150) | 195229..196296 | - | 1068 | WP_001281323.1 | glutamyl aminopeptidase | - |
| HQ615_RS01155 (HQ615_01155) | 196481..196720 | - | 240 | WP_000660180.1 | hypothetical protein | - |
| HQ615_RS01160 (HQ615_01160) | 196881..197165 | + | 285 | WP_000791272.1 | DUF4651 domain-containing protein | - |
| HQ615_RS01165 (HQ615_01165) | 197162..197485 | + | 324 | WP_000602781.1 | thioredoxin family protein | - |
| HQ615_RS01170 (HQ615_01170) | 197518..198144 | + | 627 | WP_000578328.1 | DUF4479 and tRNA-binding domain-containing protein | - |
| HQ615_RS01175 (HQ615_01175) | 198198..198914 | - | 717 | WP_235083260.1 | class I SAM-dependent methyltransferase | - |
| HQ615_RS01180 (HQ615_01180) | 198995..199390 | + | 396 | WP_000282447.1 | single-stranded DNA-binding protein | - |
| HQ615_RS01185 (HQ615_01185) | 199514..200158 | + | 645 | WP_000416612.1 | HAD family hydrolase | - |
| HQ615_RS01190 (HQ615_01190) | 200185..201930 | + | 1746 | WP_000930334.1 | Sensor histidine kinase YpdA | VF |
| HQ615_RS01195 (HQ615_01195) | 201911..202651 | + | 741 | WP_000697630.1 | LytTR family transcriptional regulator DNA-binding domain-containing protein | - |
| HQ615_RS01200 (HQ615_01200) | 202821..203276 | + | 456 | WP_000683316.1 | CidA/LrgA family protein | - |
| HQ615_RS01205 (HQ615_01205) | 203278..204006 | + | 729 | WP_000421726.1 | antiholin-like protein LrgB | - |
| HQ615_RS01210 (HQ615_01210) | 204249..205877 | + | 1629 | WP_000170504.1 | ABC transporter substrate-binding protein | - |
| HQ615_RS01215 (HQ615_01215) | 205990..206967 | + | 978 | WP_000680645.1 | ABC transporter permease | - |
| HQ615_RS01220 (HQ615_01220) | 206964..207785 | + | 822 | WP_000603397.1 | ABC transporter permease | - |
| HQ615_RS01225 (HQ615_01225) | 207797..208600 | + | 804 | WP_235083263.1 | ABC transporter ATP-binding protein | - |
| HQ615_RS01230 (HQ615_01230) | 208584..209210 | + | 627 | WP_000171311.1 | ABC transporter ATP-binding protein | - |
| HQ615_RS01235 (HQ615_01235) | 209493..211523 | + | 2031 | WP_000434616.1 | PTS system trehalose-specific EIIBC component | - |
| HQ615_RS01240 (HQ615_01240) | 211745..213370 | + | 1626 | WP_000151017.1 | alpha,alpha-phosphotrehalase | - |
| HQ615_RS01245 (HQ615_01245) | 213586..215622 | + | 2037 | WP_000228180.1 | BglG family transcription antiterminator | - |
| HQ615_RS01250 (HQ615_01250) | 215625..215909 | + | 285 | WP_000944235.1 | PTS sugar transporter subunit IIB | - |
| HQ615_RS01255 (HQ615_01255) | 215922..217277 | + | 1356 | WP_000677351.1 | PTS ascorbate transporter subunit IIC | - |
| HQ615_RS01260 (HQ615_01260) | 217280..218137 | + | 858 | WP_000203489.1 | transketolase | - |
| HQ615_RS01265 (HQ615_01265) | 218134..219063 | + | 930 | WP_001203821.1 | transketolase C-terminal domain-containing protein | - |
| HQ615_RS01270 (HQ615_01270) | 219172..220431 | + | 1260 | WP_001203071.1 | ferric reductase-like transmembrane domain-containing protein | - |
| HQ615_RS01275 (HQ615_01275) | 220519..220788 | + | 270 | WP_001018249.1 | 30S ribosomal protein S15 | - |
| HQ615_RS01280 (HQ615_01280) | 221169..223298 | + | 2130 | WP_000043850.1 | polyribonucleotide nucleotidyltransferase | - |
| HQ615_RS01285 (HQ615_01285) | 223300..224052 | + | 753 | WP_000204782.1 | SseB family protein | - |
| HQ615_RS01290 (HQ615_01290) | 224061..224645 | + | 585 | WP_000539954.1 | serine O-acetyltransferase | - |
| HQ615_RS01295 (HQ615_01295) | 224655..224837 | + | 183 | WP_000656476.1 | lipoprotein | - |
| HQ615_RS01300 (HQ615_01300) | 224834..226177 | + | 1344 | WP_000591125.1 | cysteine--tRNA ligase | - |
| HQ615_RS01305 (HQ615_01305) | 226170..226556 | + | 387 | WP_029140668.1 | Mini-ribonuclease 3 | - |
| HQ615_RS01310 (HQ615_01310) | 226659..227414 | + | 756 | WP_000178026.1 | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | - |
| HQ615_RS01315 (HQ615_01315) | 227411..227929 | + | 519 | WP_000716636.1 | NYN domain-containing protein | - |
| HQ615_RS01320 (HQ615_01320) | 228022..228882 | + | 861 | WP_000143135.1 | DegV family protein | - |
| HQ615_RS01325 | 229419..229538 | + | 120 | Protein_209 | helix-turn-helix domain-containing protein | - |
| HQ615_RS01330 (HQ615_01325) | 229763..230209 | + | 447 | WP_001865567.1 | 50S ribosomal protein L13 | - |
| HQ615_RS01335 (HQ615_01330) | 230230..230622 | + | 393 | WP_000035940.1 | 30S ribosomal protein S9 | - |
| HQ615_RS01340 (HQ615_01335) | 230760..231914 | - | 1155 | WP_020916100.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| HQ615_RS01345 (HQ615_01340) | 231969..232487 | - | 519 | WP_050197290.1 | helix-turn-helix transcriptional regulator | - |
| HQ615_RS01350 (HQ615_01345) | 232636..232920 | + | 285 | WP_020916102.1 | hypothetical protein | - |
| HQ615_RS01355 | 232929..233753 | + | 825 | WP_020916103.1 | DnaD domain protein | - |
| HQ615_RS01360 (HQ615_01360) | 233768..234058 | + | 291 | WP_020916104.1 | DUF5962 family protein | - |
| HQ615_RS01365 (HQ615_01365) | 234051..234413 | + | 363 | WP_020916105.1 | hypothetical protein | - |
| HQ615_RS01370 (HQ615_01370) | 234413..234769 | + | 357 | WP_020916106.1 | hypothetical protein | - |
| HQ615_RS01375 (HQ615_01375) | 235499..236371 | + | 873 | WP_020916108.1 | hypothetical protein | - |
| HQ615_RS01380 (HQ615_01380) | 236361..237575 | + | 1215 | WP_020916109.1 | YcaO-like family protein | - |
| HQ615_RS01385 (HQ615_01385) | 237588..238397 | + | 810 | WP_020916110.1 | SagB/ThcOx family dehydrogenase | - |
| HQ615_RS01390 (HQ615_01390) | 238399..239346 | + | 948 | WP_020916111.1 | hypothetical protein | - |
| HQ615_RS01395 (HQ615_01395) | 239348..240217 | + | 870 | WP_020916112.1 | Zinc import ATP-binding protein ZnuC | VF |
| HQ615_RS01400 (HQ615_01400) | 240201..240944 | + | 744 | WP_050197291.1 | ABC transporter permease | - |
| HQ615_RS01405 (HQ615_01405) | 240954..241469 | + | 516 | WP_020916113.1 | LytTR family DNA-binding domain-containing protein | - |
| HQ615_RS01410 (HQ615_01410) | 242222..243376 | - | 1155 | WP_000022165.1 | Prophage integrase IntS ; Integrase | Integrase |
| HQ615_RS01415 (HQ615_01415) | 243440..244030 | - | 591 | WP_000181098.1 | helix-turn-helix transcriptional regulator | - |
| HQ615_RS01420 (HQ615_01420) | 244185..244490 | + | 306 | WP_000331954.1 | hypothetical protein | - |
| HQ615_RS01425 (HQ615_01425) | 244626..244904 | + | 279 | WP_000134670.1 | hypothetical protein | - |
| HQ615_RS01430 (HQ615_01430) | 244915..245145 | + | 231 | WP_000360142.1 | hypothetical protein | - |
| HQ615_RS01435 (HQ615_01435) | 245158..245484 | + | 327 | WP_000384270.1 | replication initiator protein A | - |
| HQ615_RS01440 (HQ615_01440) | 245488..246117 | + | 630 | WP_000591148.1 | hypothetical protein | - |
| HQ615_RS01445 (HQ615_01445) | 246441..247316 | + | 876 | WP_000770113.1 | hypothetical protein | - |
| HQ615_RS01450 (HQ615_01450) | 247352..247786 | + | 435 | WP_001220479.1 | hypothetical protein | - |
| HQ615_RS01455 (HQ615_01455) | 248102..249358 | + | 1257 | WP_000122832.1 | MobV family relaxase | - |
| HQ615_RS01460 (HQ615_01460) | 249526..249996 | + | 471 | WP_000130119.1 | hypothetical protein | - |
| HQ615_RS01465 (HQ615_01465) | 250301..250636 | - | 336 | WP_000384858.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HQ615_RS01470 (HQ615_01470) | 250626..250913 | - | 288 | WP_000255538.1 | hypothetical protein | Antitoxin Detail |
| HQ615_RS01475 (HQ615_01475) | 251316..252536 | - | 1221 | WP_000156558.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HQ615_RS01480 (HQ615_01480) | 252597..252857 | - | 261 | WP_001196072.1 | helix-turn-helix domain-containing protein | - |
| HQ615_RS01485 (HQ615_01485) | 252869..253615 | - | 747 | WP_000966632.1 | hypothetical protein | - |
| HQ615_RS01490 (HQ615_01490) | 253801..254592 | - | 792 | WP_001868842.1 | hypothetical protein | - |
| HQ615_RS01495 (HQ615_01495) | 254573..255106 | - | 534 | WP_000680721.1 | hypothetical protein | - |
| HQ615_RS01500 (HQ615_01500) | 255106..255444 | - | 339 | WP_001187920.1 | hypothetical protein | - |
| HQ615_RS01505 (HQ615_01505) | 255627..256556 | + | 930 | WP_000381084.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|