MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 103091 bp
Accession: NZ_CP053835 Location: 1230091..1333181 Organism: Arcobacter defluvii strain LMG 25694 Replicon: chromosome
Accession: NZ_CP053835 Location: 1230091..1333181 Organism: Arcobacter defluvii strain LMG 25694 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ADFLV_RS06180 () | 1225404..1226087 | + | 684 | WP_129011046.1 | ThiF family adenylyltransferase | - |
| ADFLV_RS06185 () | 1226266..1229511 | + | 3246 | WP_129011045.1 | carbamoyl-phosphate synthase large subunit | - |
| ADFLV_RS06190 () | 1229513..1229956 | + | 444 | WP_014473984.1 | hypothetical protein | - |
| ADFLV_RS06200 () | 1230581..1231366 | + | 786 | WP_129011296.1 | SprT-like domain-containing protein | - |
| ADFLV_RS06205 () | 1231978..1232157 | + | 180 | WP_129011295.1 | hypothetical protein | - |
| ADFLV_RS06210 () | 1232149..1232751 | - | 603 | WP_129011294.1 | zeta toxin family protein | - |
| ADFLV_RS06215 () | 1232748..1233110 | - | 363 | WP_129011293.1 | hypothetical protein | - |
| ADFLV_RS06220 () | 1233103..1233369 | - | 267 | WP_129011292.1 | hypothetical protein | - |
| ADFLV_RS06225 () | 1233642..1234199 | + | 558 | WP_129011291.1 | hypothetical protein | - |
| ADFLV_RS06230 () | 1234202..1235428 | + | 1227 | WP_129011290.1 | spore coat protein CotH | - |
| ADFLV_RS06235 () | 1235432..1235791 | - | 360 | WP_129011289.1 | hypothetical protein | - |
| ADFLV_RS06240 () | 1235803..1236432 | - | 630 | WP_172658761.1 | zeta toxin family protein | - |
| ADFLV_RS06245 () | 1236489..1236752 | - | 264 | WP_129011287.1 | hypothetical protein | - |
| ADFLV_RS06250 () | 1237027..1237410 | - | 384 | WP_129011286.1 | hypothetical protein | - |
| ADFLV_RS06255 () | 1237407..1237607 | - | 201 | WP_129011285.1 | helix-turn-helix domain-containing protein | - |
| ADFLV_RS06260 () | 1238063..1238710 | - | 648 | WP_129011284.1 | hypothetical protein | - |
| ADFLV_RS06265 () | 1238820..1239746 | - | 927 | WP_129011283.1 | hypothetical protein | - |
| ADFLV_RS06270 () | 1239950..1245643 | - | 5694 | WP_129011282.1 | Eco57I restriction-modification methylase domain-containing protein | - |
| ADFLV_RS06275 () | 1245879..1248053 | - | 2175 | WP_129011281.1 | DNA topoisomerase 3 | - |
| ADFLV_RS06280 () | 1248088..1248576 | - | 489 | WP_129011280.1 | lytic transglycosylase domain-containing protein | - |
| ADFLV_RS06285 () | 1248577..1249254 | - | 678 | WP_129011279.1 | conjugal transfer protein TrbM | - |
| ADFLV_RS06290 () | 1249439..1249957 | - | 519 | WP_129011278.1 | restriction endonuclease | - |
| ADFLV_RS06295 () | 1252891..1253016 | - | 126 | Protein_1234 | hypothetical protein | VF |
| ADFLV_RS06300 () | 1253529..1253741 | - | 213 | WP_129012118.1 | hypothetical protein | - |
| ADFLV_RS06305 () | 1253738..1254799 | - | 1062 | WP_129012117.1 | hypothetical protein | - |
| ADFLV_RS06310 () | 1254799..1254984 | - | 186 | WP_129012116.1 | hypothetical protein | - |
| ADFLV_RS06315 () | 1255009..1255695 | - | 687 | WP_129012115.1 | hypothetical protein | - |
| ADFLV_RS06320 () | 1256059..1257891 | - | 1833 | WP_129012114.1 | Protein VirD4 | VF |
| ADFLV_RS06325 () | 1257875..1258879 | - | 1005 | WP_172658817.1 | Type IV secretion system protein VirB11 | VF |
| ADFLV_RS06330 () | 1258910..1260082 | - | 1173 | WP_129012112.1 | Type IV secretion system protein virB10 | VF |
| ADFLV_RS06335 () | 1260072..1260956 | - | 885 | WP_129012111.1 | Type IV secretion system protein virB9 | VF |
| ADFLV_RS06340 () | 1260953..1261672 | - | 720 | WP_129012110.1 | Type IV secretion system protein virB8 | VF |
| ADFLV_RS06345 () | 1261672..1261839 | - | 168 | WP_164968547.1 | hypothetical protein | - |
| ADFLV_RS06350 () | 1261952..1262896 | - | 945 | WP_129012109.1 | type IV secretion system protein | - |
| ADFLV_RS06355 () | 1262943..1263230 | - | 288 | WP_129012108.1 | hypothetical protein | - |
| ADFLV_RS06360 () | 1263281..1263985 | - | 705 | WP_129012107.1 | hypothetical protein | - |
| ADFLV_RS06365 () | 1264118..1264552 | - | 435 | WP_129012106.1 | cag pathogenicity island protein | - |
| ADFLV_RS06370 () | 1264609..1267374 | - | 2766 | WP_129012105.1 | Type IV secretion system protein virB4 | VF |
| ADFLV_RS06375 () | 1267389..1267670 | - | 282 | WP_129012104.1 | TrbC/VirB2 family protein | - |
| ADFLV_RS06380 () | 1268003..1269094 | - | 1092 | WP_129012103.1 | hypothetical protein | - |
| ADFLV_RS06385 () | 1269091..1269372 | - | 282 | WP_129012102.1 | hypothetical protein | - |
| ADFLV_RS06390 () | 1269372..1269779 | - | 408 | WP_129012101.1 | hypothetical protein | - |
| ADFLV_RS06395 () | 1269782..1269979 | - | 198 | WP_129012100.1 | helix-turn-helix domain-containing protein | - |
| ADFLV_RS06400 () | 1270161..1270547 | + | 387 | WP_129012099.1 | helix-turn-helix domain-containing protein | - |
| ADFLV_RS06405 () | 1270855..1271937 | - | 1083 | WP_129012098.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| ADFLV_RS06410 () | 1273323..1274342 | - | 1020 | WP_129012097.1 | hypothetical protein | - |
| ADFLV_RS06415 () | 1274329..1274946 | - | 618 | WP_129012096.1 | hypothetical protein | - |
| ADFLV_RS06420 () | 1274960..1275394 | - | 435 | WP_129012095.1 | hypothetical protein | - |
| ADFLV_RS06425 () | 1275638..1275877 | + | 240 | WP_129012094.1 | helix-turn-helix domain-containing protein | - |
| ADFLV_RS06430 () | 1275889..1276248 | + | 360 | WP_129012093.1 | hypothetical protein | - |
| ADFLV_RS06435 () | 1276260..1276430 | + | 171 | WP_129012092.1 | helix-turn-helix domain-containing protein | - |
| ADFLV_RS06440 () | 1276470..1277282 | + | 813 | WP_129012091.1 | hypothetical protein | - |
| ADFLV_RS06445 () | 1277292..1277693 | + | 402 | WP_129012090.1 | hypothetical protein | - |
| ADFLV_RS06450 () | 1277690..1278010 | + | 321 | WP_129012089.1 | hypothetical protein | - |
| ADFLV_RS06455 () | 1278012..1279880 | + | 1869 | WP_129012088.1 | hypothetical protein | - |
| ADFLV_RS06460 () | 1279891..1280052 | - | 162 | WP_164968546.1 | hypothetical protein | - |
| ADFLV_RS06465 () | 1280142..1280657 | + | 516 | WP_129012087.1 | hypothetical protein | - |
| ADFLV_RS06470 () | 1280670..1281278 | + | 609 | WP_129012086.1 | hypothetical protein | - |
| ADFLV_RS06475 () | 1281262..1283670 | + | 2409 | WP_129012085.1 | hypothetical protein | - |
| ADFLV_RS06480 () | 1283767..1284255 | + | 489 | WP_129012084.1 | hypothetical protein | - |
| ADFLV_RS06485 () | 1284267..1284437 | + | 171 | WP_164968545.1 | hypothetical protein | - |
| ADFLV_RS06490 () | 1284784..1285344 | + | 561 | WP_129012083.1 | hypothetical protein | - |
| ADFLV_RS06495 () | 1285479..1285937 | - | 459 | WP_129012082.1 | hypothetical protein | - |
| ADFLV_RS06500 () | 1286103..1286396 | + | 294 | WP_129012081.1 | hypothetical protein | - |
| ADFLV_RS06505 () | 1286401..1287171 | + | 771 | WP_129012080.1 | hypothetical protein | - |
| ADFLV_RS06510 () | 1287174..1287671 | + | 498 | WP_129012079.1 | hypothetical protein | - |
| ADFLV_RS06515 () | 1287683..1288009 | + | 327 | WP_129012078.1 | hypothetical protein | - |
| ADFLV_RS06520 () | 1288011..1288544 | + | 534 | WP_129012077.1 | hypothetical protein | - |
| ADFLV_RS06525 () | 1288541..1289041 | + | 501 | WP_129012076.1 | hypothetical protein | - |
| ADFLV_RS06530 () | 1289053..1289751 | + | 699 | WP_129012075.1 | metallophosphoesterase | - |
| ADFLV_RS06535 () | 1289834..1290061 | - | 228 | WP_129012074.1 | hypothetical protein | - |
| ADFLV_RS06540 () | 1290555..1292030 | + | 1476 | WP_129012073.1 | DUF2779 domain-containing protein | - |
| ADFLV_RS06545 () | 1292027..1294030 | + | 2004 | WP_164968544.1 | DUF4357 domain-containing protein | - |
| ADFLV_RS06550 () | 1294020..1295264 | + | 1245 | WP_129012072.1 | McrC family protein | - |
| ADFLV_RS06555 () | 1295334..1296980 | + | 1647 | WP_129012071.1 | AAA family ATPase | - |
| ADFLV_RS06560 () | 1296980..1298389 | + | 1410 | WP_129012070.1 | hypothetical protein | - |
| ADFLV_RS06565 () | 1298450..1298998 | + | 549 | WP_129012069.1 | hypothetical protein | - |
| ADFLV_RS06570 () | 1299051..1299407 | + | 357 | WP_129012068.1 | hypothetical protein | - |
| ADFLV_RS06575 () | 1299473..1300087 | + | 615 | WP_129012067.1 | hypothetical protein | - |
| ADFLV_RS06580 () | 1300196..1300996 | + | 801 | WP_129012066.1 | hypothetical protein | - |
| ADFLV_RS06585 () | 1301036..1301836 | - | 801 | WP_129012065.1 | agmatine deiminase family protein | - |
| ADFLV_RS06590 () | 1301949..1302494 | + | 546 | WP_129012064.1 | hypothetical protein | - |
| ADFLV_RS06595 () | 1302609..1303079 | + | 471 | WP_129012063.1 | hypothetical protein | - |
| ADFLV_RS06600 () | 1303092..1303487 | + | 396 | WP_129012062.1 | hypothetical protein | - |
| ADFLV_RS06605 () | 1303484..1303810 | + | 327 | WP_129012061.1 | hypothetical protein | - |
| ADFLV_RS06610 () | 1303827..1304528 | + | 702 | WP_129012060.1 | NAD-dependent deacetylase | - |
| ADFLV_RS06615 () | 1304594..1306237 | + | 1644 | WP_129012059.1 | ATP-binding protein | - |
| ADFLV_RS06620 () | 1306259..1306558 | + | 300 | WP_129012058.1 | hypothetical protein | - |
| ADFLV_RS06625 () | 1306555..1306767 | - | 213 | WP_129012057.1 | hypothetical protein | - |
| ADFLV_RS06630 () | 1306901..1307818 | + | 918 | WP_129012119.1 | WYL domain-containing protein | - |
| ADFLV_RS06635 () | 1307870..1309177 | + | 1308 | WP_129012056.1 | AAA family ATPase | - |
| ADFLV_RS06640 () | 1309248..1310060 | + | 813 | WP_129012055.1 | NAD-dependent deacetylase | - |
| ADFLV_RS06645 () | 1310091..1311311 | - | 1221 | WP_129012054.1 | hypothetical protein | - |
| ADFLV_RS06650 () | 1311412..1311666 | + | 255 | WP_129012053.1 | hypothetical protein | - |
| ADFLV_RS06655 () | 1311744..1312217 | + | 474 | WP_172658762.1 | hypothetical protein | - |
| ADFLV_RS06660 () | 1312331..1312924 | + | 594 | WP_172658763.1 | hypothetical protein | - |
| ADFLV_RS06665 () | 1312971..1313321 | + | 351 | WP_129012235.1 | hypothetical protein | - |
| ADFLV_RS06670 () | 1313361..1314416 | + | 1056 | WP_129012236.1 | PD-(D/E)XK nuclease family protein | - |
| ADFLV_RS06675 () | 1314602..1314850 | + | 249 | WP_129012237.1 | hypothetical protein | - |
| ADFLV_RS06680 () | 1315110..1315553 | + | 444 | WP_172658764.1 | hypothetical protein | - |
| ADFLV_RS06685 () | 1315567..1316286 | + | 720 | WP_129012240.1 | hypothetical protein | - |
| ADFLV_RS06690 () | 1316378..1316839 | + | 462 | WP_129012239.1 | hypothetical protein | - |
| ADFLV_RS06695 () | 1316921..1318006 | + | 1086 | WP_172658765.1 | PD-(D/E)XK nuclease family protein | - |
| ADFLV_RS06700 () | 1318311..1319405 | - | 1095 | WP_129012219.1 | Tn3 family transposase TnpR_ISNpu13 | Transposase |
| ADFLV_RS06705 () | 1320015..1320179 | + | 165 | WP_172658818.1 | tyrosine-type recombinase/integrase | - |
| ADFLV_RS06710 () | 1320424..1323759 | + | 3336 | WP_129012218.1 | type II CRISPR RNA-guided endonuclease Cas9 | - |
| ADFLV_RS06715 () | 1323759..1324682 | + | 924 | WP_129012217.1 | type II CRISPR-associated endonuclease Cas1 | - |
| ADFLV_RS06720 () | 1324669..1325001 | + | 333 | WP_164968555.1 | CRISPR-associated endonuclease Cas2 | - |
| ADFLV_RS06725 () | 1327069..1327275 | - | 207 | WP_129012215.1 | hypothetical protein | - |
| ADFLV_RS06730 () | 1327289..1327885 | - | 597 | WP_129012214.1 | hypothetical protein | - |
| ADFLV_RS06735 () | 1328099..1328347 | - | 249 | WP_129012213.1 | hypothetical protein | - |
| ADFLV_RS06740 () | 1328862..1329146 | - | 285 | WP_046997415.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ADFLV_RS06745 () | 1329136..1329387 | - | 252 | WP_014468874.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| ADFLV_RS06750 () | 1330192..1330578 | - | 387 | WP_129012212.1 | hypothetical protein | - |
| ADFLV_RS06755 () | 1331097..1331267 | + | 171 | WP_164968554.1 | hypothetical protein | - |
| ADFLV_RS06760 () | 1331268..1331909 | + | 642 | WP_129012211.1 | GNAT family N-acetyltransferase | - |
| ADFLV_RS06765 () | 1331913..1332995 | - | 1083 | WP_172658766.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| ADFLV_RS06770 () | 1333322..1334080 | + | 759 | WP_129011549.1 | flagellar motor stator protein MotA | - |
| ADFLV_RS06775 () | 1334084..1334818 | + | 735 | WP_129011548.1 | flagellar motor protein MotB | - |
| ADFLV_RS06780 () | 1334852..1335916 | + | 1065 | WP_129011547.1 | DUF475 domain-containing protein | - |
| ADFLV_RS06785 () | 1336118..1337500 | + | 1383 | WP_014474052.1 | sodium:proton antiporter NhaD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|