MGE detailed information
MGE type: Genomic_island MGE length: 25593 bp
Accession: NZ_CP053751 Location: 2612757..2638349 Organism: Shigella sonnei strain 506 Replicon: chromosome
Accession: NZ_CP053751 Location: 2612757..2638349 Organism: Shigella sonnei strain 506 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| COO90_RS12925 (2609109) | 2609109..2609723 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| COO90_RS12930 (2609766) | 2609766..2610620 | - | 855 | WP_000526502.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| COO90_RS12935 (2610622) | 2610622..2611239 | - | 618 | WP_000213029.1 | dimethylsulfoxide reductase subunit B | - |
| COO90_RS12940 (2611250) | 2611250..2612326 | - | 1077 | Protein_2519 | molybdopterin dinucleotide binding domain-containing protein | - |
| COO90_RS12945 (2612384) | 2612384..2613081 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| COO90_RS12950 (2613229) | 2613229..2613594 | - | 366 | WP_024174355.1 | hypothetical protein | - |
| COO90_RS12955 (2613606) | 2613606..2613758 | - | 153 | WP_000379558.1 | DUF1391 family protein | - |
| COO90_RS12960 (2614038) | 2614038..2614328 | - | 291 | WP_014334020.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| COO90_RS12965 (2614328) | 2614328..2614522 | - | 195 | WP_005142544.1 | hypothetical protein | Antitoxin Detail |
| COO90_RS12970 (2614542) | 2614542..2615027 | - | 486 | WP_053002468.1 | helix-turn-helix domain-containing protein | - |
| COO90_RS12975 (2615154) | 2615154..2615417 | + | 264 | WP_001048456.1 | helix-turn-helix transcriptional regulator | - |
| COO90_RS12980 (2615414) | 2615414..2615839 | + | 426 | WP_000693826.1 | toxin YdaT family protein | - |
| COO90_RS12985 (2615911) | 2615911..2616975 | + | 1065 | WP_039063478.1 | phage replisome organizer | - |
| COO90_RS12990 (2616982) | 2616982..2617728 | + | 747 | WP_000788740.1 | ATP-binding protein | - |
| COO90_RS12995 (2617750) | 2617750..2618475 | + | 726 | WP_000450631.1 | DUF1627 domain-containing protein | - |
| COO90_RS13000 (2618491) | 2618491..2618913 | + | 423 | WP_001151171.1 | DUF977 family protein | - |
| COO90_RS13005 (2618971) | 2618971..2619327 | + | 357 | WP_005140877.1 | hypothetical protein | - |
| COO90_RS13010 (2619542) | 2619542..2621374 | + | 1833 | WP_000113426.1 | N-6 DNA methylase | - |
| COO90_RS13015 (2621371) | 2621371..2622453 | + | 1083 | WP_001053102.1 | BsuBI/PstI family type II restriction endonuclease | - |
| COO90_RS27430 (2622494) | 2622494..2622619 | - | 126 | WP_005140887.1 | hypothetical protein | - |
| COO90_RS13020 (2622661) | 2622661..2623358 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| COO90_RS13025 (2623422) | 2623422..2624882 | + | 1461 | WP_000527756.1 | mannitol dehydrogenase family protein | - |
| COO90_RS13030 (2624918) | 2624918..2625121 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| COO90_RS13035 (2625298) | 2625298..2625984 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| COO90_RS13040 (2626073) | 2626073..2626819 | - | 747 | WP_000636571.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| COO90_RS13045 (2626956) | 2626956..2629001 | + | 2046 | WP_005142554.1 | peptidyl-dipeptidase Dcp | - |
| COO90_RS13050 (2629046) | 2629046..2629564 | - | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| COO90_RS13055 (2629840) | 2629840..2630232 | + | 393 | WP_000671981.1 | YdeI family stress tolerance OB fold protein | - |
| COO90_RS13060 (2630487) | 2630487..2631377 | + | 891 | WP_000592822.1 | diguanylate cyclase DgcZ | - |
| COO90_RS13065 (2631492) | 2631492..2631596 | - | 105 | WP_211180496.1 | protein MgtT | - |
| COO90_RS13070 (2631651) | 2631651..2632348 | + | 698 | WP_237163092.1 | IS1-like element IS1A family transposase | - |
| COO90_RS13075 (2632409) | 2632409..2633848 | + | 1440 | WP_000012618.1 | 6-phospho-beta-glucosidase | - |
| COO90_RS13080 (2633905) | 2633905..2634123 | - | 219 | WP_000803659.1 | multiple antibiotic resistance protein MarB | - |
| COO90_RS13085 (2634155) | 2634155..2634538 | - | 384 | WP_000091199.1 | HTH-type transcriptional activator RhaS | VF |
| COO90_RS13090 (2634558) | 2634558..2634992 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| COO90_RS13095 (2635204) | 2635204..2635869 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| COO90_RS13100 (2635894) | 2635894..2637084 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| COO90_RS13105 (2637234) | 2637234..2638349 | - | 1116 | WP_000258571.1 | putative protein YneK | - |
| COO90_RS13110 (2638426) | 2638426..2639307 | - | 882 | WP_000366499.1 | LysR family transcriptional regulator | - |
| COO90_RS13115 (2639408) | 2639408..2640796 | + | 1389 | WP_000156626.1 | succinate-semialdehyde dehydrogenase | - |
| COO90_RS13120 (2640860) | 2640860..2641786 | + | 927 | WP_000257409.1 | glutaminase B | - |
| COO90_RS13125 (2641786) | 2641786..2641944 | + | 159 | Protein_2557 | DUF4186 family protein | - |
| COO90_RS13135 (2642713) | 2642713..2642922 | + | 210 | Protein_2559 | DUF4186 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|