MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 38002 bp
Accession: NZ_CP053740 Location: 1..38002 Organism: Escherichia coli strain CP8-3_Sichuan Replicon: plasmid pCP8-3-IncX1
Accession: NZ_CP053740 Location: 1..38002 Organism: Escherichia coli strain CP8-3_Sichuan Replicon: plasmid pCP8-3-IncX1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HP430_RS23955 () | 2432..2728 | - | 297 | WP_000916182.1 | TrbC/VirB2 family protein | - |
| HP430_RS23960 () | 2706..3353 | - | 648 | WP_000953529.1 | Type IV secretion system protein virB1 | VF |
| HP430_RS23965 () | 3386..3598 | - | 213 | WP_032312290.1 | hypothetical protein | - |
| HP430_RS23970 () | 3528..4046 | - | 519 | WP_001446885.1 | transcription termination factor NusG | - |
| HP430_RS23975 () | 4392..5558 | - | 1167 | WP_000539530.1 | hypothetical protein | Relaxase |
| HP430_RS23980 () | 5561..6106 | - | 546 | WP_015060502.1 | hypothetical protein | - |
| HP430_RS23985 () | 6432..6704 | - | 273 | WP_000160399.1 | hypothetical protein | - |
| HP430_RS23990 () | 6717..6866 | - | 150 | WP_000003880.1 | hypothetical protein | - |
| HP430_RS23995 () | 6936..7115 | - | 180 | WP_000439078.1 | hypothetical protein | - |
| HP430_RS24000 () | 7158..7487 | - | 330 | WP_000866648.1 | hypothetical protein | - |
| HP430_RS24005 () | 7580..7795 | - | 216 | WP_001180116.1 | hypothetical protein | - |
| HP430_RS24010 () | 7785..8030 | - | 246 | WP_000356546.1 | hypothetical protein | - |
| HP430_RS24015 () | 8075..8398 | - | 324 | WP_001181903.1 | hypothetical protein | - |
| HP430_RS24020 () | 8544..8825 | - | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HP430_RS24025 () | 8815..9066 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| HP430_RS24030 () | 10300..11136 | + | 837 | WP_001050931.1 | replication initiation protein | - |
| HP430_RS24035 () | 11176..11622 | + | 447 | WP_001074386.1 | hypothetical protein | - |
| HP430_RS24040 () | 11759..12112 | + | 354 | WP_000876434.1 | hypothetical protein | - |
| HP430_RS24045 () | 12172..13140 | - | 969 | WP_031942372.1 | IS5 family transposase IS903B | Transposase |
| HP430_RS24050 () | 13142..13435 | - | 294 | WP_015060510.1 | hypothetical protein | - |
| HP430_RS24055 () | 13451..13681 | - | 231 | WP_000051064.1 | partitioning protein | - |
| HP430_RS24060 () | 13733..14353 | - | 621 | WP_000864791.1 | ParA family protein | - |
| HP430_RS24065 () | 14639..15283 | + | 645 | WP_000203199.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HP430_RS24070 () | 15399..15578 | - | 180 | WP_012291479.1 | hypothetical protein | - |
| HP430_RS24075 () | 16876..17572 | - | 697 | Protein_25 | IS1 family transposase | - |
| HP430_RS24080 () | 17653..18288 | - | 636 | WP_000677445.1 | hypothetical protein | VF |
| HP430_RS24085 () | 18302..19297 | - | 996 | WP_172614376.1 | Fimbria adhesin protein | VF |
| HP430_RS24090 () | 19288..21774 | - | 2487 | WP_000813718.1 | Outer membrane usher protein HtrE | VF |
| HP430_RS24095 () | 21786..22487 | - | 702 | WP_000820818.1 | putative fimbrial chaperone YadV | VF |
| HP430_RS24100 () | 22583..23191 | - | 609 | WP_002916128.1 | hypothetical protein | VF |
| HP430_RS24105 () | 23473..24170 | + | 698 | Protein_31 | IS1 family transposase | - |
| HP430_RS24110 () | 24167..24607 | + | 441 | WP_071997311.1 | EAL domain-containing protein | - |
| HP430_RS24115 () | 24876..25310 | - | 435 | WP_001293129.1 | H-NS histone family protein | - |
| HP430_RS24120 () | 25326..25532 | - | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| HP430_RS24125 () | 25529..27682 | - | 2154 | WP_031942376.1 | type IA DNA topoisomerase | - |
| HP430_RS24130 () | 27818..28741 | + | 924 | WP_031942377.1 | SMEK domain-containing protein | - |
| HP430_RS24135 () | 28856..29158 | - | 303 | WP_000717624.1 | IncN plasmid KikA protein | - |
| HP430_RS24140 () | 29155..29568 | - | 414 | WP_031942378.1 | conjugal transfer protein VirB | - |
| HP430_RS24145 () | 29565..31400 | - | 1836 | WP_031942379.1 | type IV secretory system conjugative DNA transfer family protein | - |
| HP430_RS24150 () | 31403..32434 | - | 1032 | WP_001058463.1 | Type IV secretion system protein VirB11 | VF |
| HP430_RS24155 () | 32436..33641 | - | 1206 | WP_000139139.1 | Type IV secretion system protein virB10 | VF |
| HP430_RS24160 () | 33638..34567 | - | 930 | WP_000783379.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| HP430_RS24165 () | 34572..35285 | - | 714 | WP_000394613.1 | type IV secretion system protein | - |
| HP430_RS24170 () | 35530..36591 | - | 1062 | WP_000796673.1 | hypothetical protein | VF |
| HP430_RS24175 () | 36603..36887 | - | 285 | WP_000748128.1 | EexN family lipoprotein | - |
| HP430_RS24180 () | 36902..37651 | - | 750 | WP_000744202.1 | pilus assembly protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|