MGE detailed information
MGE type: Genomic_island MGE length: 48414 bp
Accession: NZ_CP053731 Location: 3690741..3739154 Organism: Escherichia coli strain CP55_Sichuan Replicon: chromosome
Accession: NZ_CP053731 Location: 3690741..3739154 Organism: Escherichia coli strain CP55_Sichuan Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HP431_RS17640 () | 3685784..3686347 | + | 564 | WP_001115139.1 | type II secretion system minor pseudopilin GspH | - |
| HP431_RS17645 () | 3686344..3686715 | + | 372 | WP_000820125.1 | type II secretion system minor pseudopilin GspI | - |
| HP431_RS17650 () | 3686712..3687317 | + | 606 | WP_001255030.1 | type II secretion system minor pseudopilin GspJ | - |
| HP431_RS17655 () | 3687314..3688291 | + | 978 | WP_000633239.1 | type II secretion system minor pseudopilin GspK | - |
| HP431_RS17660 () | 3688288..3689466 | + | 1179 | WP_000094989.1 | type II secretion system protein GspL | - |
| HP431_RS17665 () | 3689468..3690004 | + | 537 | WP_000942795.1 | GspM family type II secretion system protein YghD | - |
| HP431_RS17670 () | 3690418..3690744 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HP431_RS17675 () | 3690741..3691004 | - | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| HP431_RS17680 () | 3691076..3691942 | - | 867 | WP_000014510.1 | DUF4942 domain-containing protein | - |
| HP431_RS17685 () | 3692027..3692224 | - | 198 | WP_000839255.1 | DUF957 domain-containing protein | - |
| HP431_RS17690 () | 3692236..3692724 | - | 489 | WP_000761662.1 | hypothetical protein | - |
| HP431_RS17695 () | 3692721..3693098 | - | 378 | WP_000854896.1 | TA system toxin CbtA family protein | Toxin Detail |
| HP431_RS17700 () | 3693145..3693519 | - | 375 | WP_024175300.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HP431_RS17705 () | 3693682..3693903 | - | 222 | WP_000692358.1 | DUF987 domain-containing protein | - |
| HP431_RS17710 () | 3693966..3694442 | - | 477 | WP_001186727.1 | RadC family protein | - |
| HP431_RS17715 () | 3694458..3694943 | - | 486 | WP_000214386.1 | antirestriction protein | - |
| HP431_RS17720 () | 3695033..3695851 | - | 819 | WP_033884686.1 | DUF945 domain-containing protein | - |
| HP431_RS17725 () | 3695942..3696175 | - | 234 | WP_001117568.1 | DUF905 family protein | - |
| HP431_RS17730 () | 3696246..3699092 | - | 2847 | WP_113440878.1 | Ag43/Cah family autotransporter adhesin | - |
| HP431_RS17735 () | 3699464..3700336 | - | 873 | WP_001069783.1 | GTPase family protein | - |
| HP431_RS17740 () | 3700844..3701602 | + | 759 | WP_024213478.1 | hypothetical protein | - |
| HP431_RS17745 () | 3701775..3702719 | - | 945 | WP_032351765.1 | hypothetical protein | - |
| HP431_RS17750 () | 3702951..3703553 | + | 603 | Protein_3465 | hypothetical protein ; Integrase | Integrase |
| HP431_RS17755 () | 3703729..3704687 | + | 959 | Protein_3466 | restriction endonuclease | - |
| HP431_RS17760 () | 3705322..3706497 | - | 1176 | WP_000263652.1 | hypothetical protein | - |
| HP431_RS17765 () | 3707747..3708043 | - | 297 | Protein_3468 | transposase | - |
| HP431_RS17770 () | 3708185..3708400 | - | 216 | WP_001327829.1 | hypothetical protein | - |
| HP431_RS17775 () | 3708873..3709475 | - | 603 | WP_000813431.1 | hypothetical protein | - |
| HP431_RS17780 () | 3709569..3709775 | - | 207 | WP_001371489.1 | AlpA family transcriptional regulator | - |
| HP431_RS17785 () | 3710161..3710952 | - | 792 | WP_001335904.1 | hypothetical protein | - |
| HP431_RS17790 () | 3712229..3712426 | + | 198 | Protein_3473 | hypothetical protein | - |
| HP431_RS17800 () | 3713679..3713921 | + | 243 | Protein_3475 | mechanosensitive ion channel | - |
| HP431_RS17805 () | 3714047..3715267 | + | 1221 | WP_001124813.1 | DUF3440 domain-containing protein | - |
| HP431_RS17810 () | 3715497..3717242 | + | 1746 | WP_024165505.1 | NERD domain-containing protein | - |
| HP431_RS17815 () | 3717424..3718053 | - | 630 | WP_000021267.1 | ParB/RepB/Spo0J family partition protein | - |
| HP431_RS17820 () | 3718643..3719434 | - | 792 | WP_000977392.1 | DUF4198 domain-containing protein | - |
| HP431_RS17825 () | 3719453..3721423 | - | 1971 | WP_001562691.1 | Hemin receptor | VF |
| HP431_RS17830 () | 3721598..3721759 | - | 162 | WP_136750695.1 | integrase core domain-containing protein | - |
| HP431_RS17835 () | 3722534..3723553 | - | 1020 | WP_000878009.1 | IS110 family transposase ISEc66 | Transposase |
| HP431_RS17840 () | 3723695..3723886 | - | 192 | WP_071525616.1 | transposase | - |
| HP431_RS17845 () | 3723868..3724125 | - | 258 | WP_001367505.1 | IS110 family transposase ISSde4 | Transposase |
| HP431_RS17850 () | 3724299..3724514 | - | 216 | WP_001367551.1 | IS110 family transposase ISHar6 | Transposase |
| HP431_RS17855 () | 3724735..3724992 | - | 258 | WP_001032733.1 | hypothetical protein | - |
| HP431_RS17860 () | 3725061..3726758 | - | 1698 | WP_000401034.1 | sulfatase | - |
| HP431_RS17865 () | 3726854..3727990 | - | 1137 | WP_001228922.1 | Outer membrane porin protein OmpD | VF |
| HP431_RS17870 () | 3728666..3728874 | + | 209 | Protein_3489 | IS66 family insertion sequence element accessory protein TnpB | - |
| HP431_RS17875 () | 3728861..3729173 | + | 313 | Protein_3490 | IS66 family insertion sequence element accessory protein TnpB | - |
| HP431_RS17880 () | 3730140..3730877 | + | 738 | WP_000634450.1 | AraC family transcriptional regulator | - |
| HP431_RS17885 () | 3731777..3735869 | + | 4093 | Protein_3492 | Serine protease SepA autotransporter | VF |
| HP431_RS17890 () | 3736361..3736726 | + | 366 | Protein_3493 | hypothetical protein | - |
| HP431_RS17895 () | 3736736..3736927 | + | 192 | WP_000264907.1 | hypothetical protein | - |
| HP431_RS17900 () | 3736961..3737284 | + | 324 | WP_000323314.1 | hypothetical protein | - |
| HP431_RS17905 () | 3737672..3738094 | - | 423 | WP_045149369.1 | subtilase AB5 cytotoxin subunit B | - |
| HP431_RS17910 () | 3738111..3739154 | - | 1044 | WP_001371002.1 | subtilase AB5 cytotoxin subunit A | - |
| HP431_RS17915 () | 3739944..3740690 | + | 747 | WP_000719907.1 | porin family protein | - |
| HP431_RS17920 () | 3740852..3742354 | + | 1503 | WP_001026217.1 | phosphoethanolamine transferase | - |
| HP431_RS17925 () | 3742713..3743756 | - | 1044 | WP_000999862.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|