MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP053731 Location: 2409745..2419096 Organism: Escherichia coli strain CP55_Sichuan Replicon: chromosome
Accession: NZ_CP053731 Location: 2409745..2419096 Organism: Escherichia coli strain CP55_Sichuan Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HP431_RS11645 () | 2404906..2406207 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| HP431_RS11650 () | 2406323..2406661 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| HP431_RS11655 () | 2406637..2408334 | + | 1698 | WP_000068978.1 | protein-disulfide reductase DsbD | - |
| HP431_RS11660 () | 2408371..2408946 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| HP431_RS11670 () | 2409745..2411283 | + | 1539 | WP_001187183.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| HP431_RS11675 () | 2411649..2412983 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| HP431_RS11680 () | 2413063..2415210 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| HP431_RS11685 () | 2415269..2416726 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| HP431_RS11690 () | 2416963..2418480 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| HP431_RS11695 () | 2418599..2418772 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| HP431_RS11700 () | 2418800..2419096 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| HP431_RS11705 () | 2419323..2419595 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| HP431_RS11710 () | 2419607..2419837 | - | 231 | WP_000371698.1 | (4Fe-4S)-binding protein | - |
| HP431_RS11715 () | 2420018..2421649 | + | 1632 | WP_001216461.1 | sensor histidine kinase | - |
| HP431_RS11720 () | 2421646..2422365 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.006 |