MGE detailed information
MGE type: Genomic_island MGE length: 34596 bp
Accession: NZ_CP053731 Location: 2153242..2187837 Organism: Escherichia coli strain CP55_Sichuan Replicon: chromosome
Accession: NZ_CP053731 Location: 2153242..2187837 Organism: Escherichia coli strain CP55_Sichuan Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HP431_RS10390 () | 2148721..2149224 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| HP431_RS10395 () | 2149237..2149767 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| HP431_RS10400 () | 2149777..2152413 | - | 2637 | WP_113440773.1 | fimbrial usher FimD | - |
| HP431_RS10405 () | 2152480..2153205 | - | 726 | WP_000066569.1 | type 1 fimbria chaperone FimC | - |
| HP431_RS10410 () | 2153242..2153781 | - | 540 | WP_000824110.1 | putative major fimbrial subunit LpfA | VF |
| HP431_RS10415 () | 2153846..2154394 | - | 549 | WP_000695543.1 | Fimbrial subunit type 1 | VF |
| HP431_RS10420 () | 2154875..2155471 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| HP431_RS10425 () | 2155949..2156551 | - | 603 | WP_113440772.1 | Tyrosine recombinase XerC | VF |
| HP431_RS10430 () | 2158005..2158721 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HP431_RS10435 () | 2158741..2159847 | + | 1107 | WP_001298927.1 | N-acetylneuraminate epimerase | - |
| HP431_RS10440 () | 2159912..2160892 | + | 981 | WP_000991444.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| HP431_RS10445 () | 2161104..2161976 | + | 873 | WP_000168567.1 | HNH endonuclease | - |
| HP431_RS10450 () | 2162087..2163085 | - | 999 | WP_001240355.1 | membrane protein | - |
| HP431_RS10455 () | 2163543..2164550 | - | 1008 | WP_032267595.1 | restriction endonuclease | - |
| HP431_RS10460 () | 2164801..2165142 | - | 342 | WP_032267594.1 | TA system toxin CbtA family protein | Toxin Detail |
| HP431_RS10465 () | 2165163..2165504 | - | 342 | WP_032267593.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HP431_RS10470 () | 2165515..2166057 | - | 543 | WP_172615514.1 | DNA repair protein RadC | - |
| HP431_RS10475 () | 2166070..2166513 | - | 444 | WP_032267591.1 | antirestriction protein | - |
| HP431_RS10480 () | 2166544..2167365 | - | 822 | WP_032267590.1 | DUF945 domain-containing protein | - |
| HP431_RS10485 () | 2167486..2167959 | - | 474 | WP_032279719.1 | hypothetical protein | - |
| HP431_RS10490 () | 2168054..2168594 | - | 541 | Protein_2058 | DUF4339 domain-containing protein | - |
| HP431_RS10495 () | 2168661..2169121 | - | 461 | Protein_2059 | hypothetical protein | - |
| HP431_RS10500 () | 2169118..2169573 | - | 456 | WP_057688286.1 | hypothetical protein | - |
| HP431_RS10505 () | 2169612..2170247 | - | 636 | WP_032267586.1 | hypothetical protein | - |
| HP431_RS10510 () | 2170244..2170957 | - | 714 | WP_000075763.1 | sporulation transcriptional regulator SpoIIID | - |
| HP431_RS10515 () | 2171218..2172093 | - | 876 | WP_032267584.1 | GTPase family protein | - |
| HP431_RS10520 () | 2172216..2173283 | - | 1068 | WP_032267583.1 | hypothetical protein | - |
| HP431_RS10525 () | 2173741..2173947 | + | 207 | WP_032267582.1 | AlpA family transcriptional regulator | - |
| HP431_RS10530 () | 2174041..2174628 | + | 588 | WP_032267581.1 | hypothetical protein | - |
| HP431_RS10535 () | 2175054..2175707 | + | 654 | WP_172615515.1 | inovirus Gp2 family protein | - |
| HP431_RS10540 () | 2175911..2176297 | + | 387 | Protein_2068 | hypothetical protein | - |
| HP431_RS10545 () | 2176521..2179370 | + | 2850 | WP_072004755.1 | DEAD/DEAH box helicase family protein | - |
| HP431_RS10550 () | 2179396..2180376 | + | 981 | WP_032267579.1 | ATP-binding protein | - |
| HP431_RS10555 () | 2180386..2182773 | + | 2388 | WP_032267578.1 | S8 family peptidase | - |
| HP431_RS10560 () | 2182784..2184400 | + | 1617 | WP_032267577.1 | site-specific DNA-methyltransferase | - |
| HP431_RS10565 () | 2184397..2187267 | + | 2871 | WP_032267576.1 | DEAD/DEAH box helicase family protein | - |
| HP431_RS10570 () | 2187352..2187642 | + | 291 | Protein_2074 | hypothetical protein | - |
| HP431_RS10575 () | 2187872..2188913 | - | 1042 | Protein_2075 | IS481 family transposase | - |
| HP431_RS10580 () | 2189249..2190511 | - | 1263 | WP_032267573.1 | integrase arm-type DNA-binding domain-containing protein | - |
| HP431_RS10590 () | 2191029..2191238 | + | 210 | WP_001514390.1 | hypothetical protein | - |
| HP431_RS10595 () | 2191321..2192823 | + | 1503 | WP_001294576.1 | DUF853 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|