MGE detailed information
MGE type: Genomic_island MGE length: 13369 bp
Accession: NZ_CP053730 Location: 3006052..3019420 Organism: Escherichia coli strain CP61_Sichuan Replicon: chromosome
Accession: NZ_CP053730 Location: 3006052..3019420 Organism: Escherichia coli strain CP61_Sichuan Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HP432_RS15445 () | 3002155..3005292 | + | 3138 | Protein_2823 | autotransporter barrel domain-containing lipoprotein | - |
| HP432_RS15450 () | 3005296..3005829 | + | 534 | Protein_2824 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| HP432_RS15455 () | 3006052..3006318 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| HP432_RS15460 () | 3006318..3007640 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| HP432_RS15465 () | 3007952..3008160 | + | 209 | Protein_2827 | helix-turn-helix transcriptional regulator | - |
| HP432_RS15470 () | 3008415..3009641 | + | 1227 | Protein_2828 | hypothetical protein | VF |
| HP432_RS15475 () | 3009655..3010053 | + | 399 | Protein_2829 | hypothetical protein | VF |
| HP432_RS15480 () | 3010145..3011337 | + | 1193 | Protein_2830 | hypothetical protein | VF |
| HP432_RS15485 () | 3011371..3012234 | + | 864 | WP_063073401.1 | hypothetical protein | VF |
| HP432_RS15490 () | 3012568..3014847 | + | 2280 | WP_000726695.1 | acid resistance putative oxidoreductase YdeP | - |
| HP432_RS15495 () | 3015095..3015292 | + | 198 | WP_000543394.1 | two-component system connector SafA | - |
| HP432_RS15500 () | 3015366..3016127 | + | 762 | WP_126699637.1 | acid stress response transcriptional regulator YdeO | - |
| HP432_RS15505 () | 3016529..3018211 | + | 1683 | WP_001295684.1 | sulfatase | - |
| HP432_RS15510 () | 3018263..3019420 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| HP432_RS15515 () | 3019386..3019508 | - | 123 | WP_120795387.1 | protein YneP | - |
| HP432_RS15520 () | 3019711..3021396 | + | 1686 | WP_172615751.1 | ABC transporter ATP-binding protein/permease | - |
| HP432_RS15525 () | 3021434..3023806 | + | 2373 | WP_096177040.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.01 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.01 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.01 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.01 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.01 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.01 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.01 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.01 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.01 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.01 |